BLASTX nr result

ID: Coptis24_contig00004988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004988
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB86256.1| eukaryotic translation initiation factor 2 beta s...   293   1e-77
gb|ACJ85179.1| unknown [Medicago truncatula]                          293   1e-77
emb|CBI15806.3| unnamed protein product [Vitis vinifera]              292   2e-77
ref|XP_002265847.1| PREDICTED: eukaryotic translation initiation...   292   2e-77
gb|AFK38320.1| unknown [Lotus japonicus]                              291   3e-77

>gb|ABB86256.1| eukaryotic translation initiation factor 2 beta subunit-like
           [Solanum tuberosum]
          Length = 265

 Score =  293 bits (749), Expect = 1e-77
 Identities = 137/143 (95%), Positives = 142/143 (99%)
 Frame = -2

Query: 431 PWEGSDRDYQYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLC 252
           PWEG+DRDY+YEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLC
Sbjct: 103 PWEGTDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLC 162

Query: 251 KTMHRQPEHVMNFLLAEMGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVICNGCKS 72
           KTMHRQPEHVM FLLAEMGTSGSLDGQQRLV+KGRFAPKNFEGILRRY+NEYVICNGCKS
Sbjct: 163 KTMHRQPEHVMTFLLAEMGTSGSLDGQQRLVIKGRFAPKNFEGILRRYVNEYVICNGCKS 222

Query: 71  PDTILSKENRLFFLRCEQCGSGR 3
           PDTILSKENRLFFLRCE+CGSGR
Sbjct: 223 PDTILSKENRLFFLRCEKCGSGR 245


>gb|ACJ85179.1| unknown [Medicago truncatula]
          Length = 269

 Score =  293 bits (749), Expect = 1e-77
 Identities = 139/144 (96%), Positives = 142/144 (98%)
 Frame = -2

Query: 434 YPWEGSDRDYQYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDL 255
           YPWEGSDRDYQYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDL
Sbjct: 105 YPWEGSDRDYQYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDL 164

Query: 254 CKTMHRQPEHVMNFLLAEMGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVICNGCK 75
           CKTMHRQP+HVM FLLAE+GTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVIC GCK
Sbjct: 165 CKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVICLGCK 224

Query: 74  SPDTILSKENRLFFLRCEQCGSGR 3
           SPDTILSKENRLFFLRCE+CGSGR
Sbjct: 225 SPDTILSKENRLFFLRCEKCGSGR 248


>emb|CBI15806.3| unnamed protein product [Vitis vinifera]
          Length = 290

 Score =  292 bits (747), Expect = 2e-77
 Identities = 139/144 (96%), Positives = 142/144 (98%)
 Frame = -2

Query: 434 YPWEGSDRDYQYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDL 255
           YPWEGSDRDY+YEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDL
Sbjct: 127 YPWEGSDRDYKYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDL 186

Query: 254 CKTMHRQPEHVMNFLLAEMGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVICNGCK 75
           CKTMHRQP+HVM FLLAE+GTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVIC GCK
Sbjct: 187 CKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVICLGCK 246

Query: 74  SPDTILSKENRLFFLRCEQCGSGR 3
           SPDTILSKENRLFFLRCEQCGSGR
Sbjct: 247 SPDTILSKENRLFFLRCEQCGSGR 270


>ref|XP_002265847.1| PREDICTED: eukaryotic translation initiation factor 2 subunit beta
           [Vitis vinifera]
          Length = 269

 Score =  292 bits (747), Expect = 2e-77
 Identities = 139/144 (96%), Positives = 142/144 (98%)
 Frame = -2

Query: 434 YPWEGSDRDYQYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDL 255
           YPWEGSDRDY+YEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDL
Sbjct: 106 YPWEGSDRDYKYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDL 165

Query: 254 CKTMHRQPEHVMNFLLAEMGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVICNGCK 75
           CKTMHRQP+HVM FLLAE+GTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVIC GCK
Sbjct: 166 CKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVICLGCK 225

Query: 74  SPDTILSKENRLFFLRCEQCGSGR 3
           SPDTILSKENRLFFLRCEQCGSGR
Sbjct: 226 SPDTILSKENRLFFLRCEQCGSGR 249


>gb|AFK38320.1| unknown [Lotus japonicus]
          Length = 268

 Score =  291 bits (746), Expect = 3e-77
 Identities = 139/144 (96%), Positives = 142/144 (98%)
 Frame = -2

Query: 434 YPWEGSDRDYQYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDL 255
           YPWEGS+RDYQYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDL
Sbjct: 105 YPWEGSERDYQYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDL 164

Query: 254 CKTMHRQPEHVMNFLLAEMGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVICNGCK 75
           CKTMHRQP+HVM FLLAEMGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVIC GCK
Sbjct: 165 CKTMHRQPDHVMAFLLAEMGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVICLGCK 224

Query: 74  SPDTILSKENRLFFLRCEQCGSGR 3
           SPDTILSKENRLFFLRCE+CGSGR
Sbjct: 225 SPDTILSKENRLFFLRCEKCGSGR 248


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