BLASTX nr result

ID: Coptis24_contig00004984 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004984
         (993 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273059.1| PREDICTED: uncharacterized protein LOC100263...   218   2e-54
emb|CAN80128.1| hypothetical protein VITISV_041592 [Vitis vinifera]   213   6e-53
ref|XP_002307800.1| predicted protein [Populus trichocarpa] gi|2...   183   5e-44
ref|XP_002510697.1| conserved hypothetical protein [Ricinus comm...   174   2e-41
ref|XP_002893129.1| hypothetical protein ARALYDRAFT_472313 [Arab...   171   2e-40

>ref|XP_002273059.1| PREDICTED: uncharacterized protein LOC100263247 [Vitis vinifera]
           gi|297745570|emb|CBI40735.3| unnamed protein product
           [Vitis vinifera]
          Length = 230

 Score =  218 bits (555), Expect = 2e-54
 Identities = 119/208 (57%), Positives = 153/208 (73%), Gaps = 4/208 (1%)
 Frame = +3

Query: 123 EEDGKVLQFLDSMDSYLTLMDSLSSTLRQGWIELASARYSMGASRVTSALYDLKLHPAVT 302
           +E+  V+ FLDSMD+YLTL+DSLSSTLRQGW+ELASAR+SMGASR++S+L+DLKLH A T
Sbjct: 20  DEEENVVTFLDSMDAYLTLIDSLSSTLRQGWLELASARHSMGASRISSSLFDLKLHSAAT 79

Query: 303 TLQVRQLDGESPRQDPMVEEPHFTLSRWLYSSEDYCYSRETGSDEADPKNKNSSSLLRHR 482
           +L+V + D      D  + +PHFTL +W  S    C S E   D  + + K+ SS LR+R
Sbjct: 80  SLRVTEDD-----VDSKMNQPHFTLCKWASSDNGKCCSGEAKFDGDELQKKSVSSQLRYR 134

Query: 483 GTSQYPDDKEFRRKA----SPVSPRSPLTGDDQVQKERSKSLSVFGKLVSPKLREAQVSF 650
           GTSQ+ + +E + K+    SP S  SPL+ D  VQK+R KSLSVFG LVSPKLR AQ SF
Sbjct: 135 GTSQFDEPQEIQEKSPTCKSPTSNGSPLSLDSPVQKQRHKSLSVFGTLVSPKLRAAQFSF 194

Query: 651 ETALETLIKIANVRSLMLSAHAQVQQDL 734
           ETALET+++IAN+RS MLSA  QVQ+D+
Sbjct: 195 ETALETIVEIANMRSSMLSAFDQVQKDI 222


>emb|CAN80128.1| hypothetical protein VITISV_041592 [Vitis vinifera]
          Length = 225

 Score =  213 bits (542), Expect = 6e-53
 Identities = 117/204 (57%), Positives = 149/204 (73%)
 Frame = +3

Query: 123 EEDGKVLQFLDSMDSYLTLMDSLSSTLRQGWIELASARYSMGASRVTSALYDLKLHPAVT 302
           +E+  V+ FLDSMD+YLTL+DSLSSTLRQGW+ELASAR+SMGASR++S+L+DLKLH A T
Sbjct: 20  DEEENVVTFLDSMDAYLTLIDSLSSTLRQGWLELASARHSMGASRISSSLFDLKLHSAAT 79

Query: 303 TLQVRQLDGESPRQDPMVEEPHFTLSRWLYSSEDYCYSRETGSDEADPKNKNSSSLLRHR 482
           +L+V + D      D  + +PHFTL +W  S    C S E   D  + + K+ S  LR+R
Sbjct: 80  SLRVTEDD-----VDSKMNQPHFTLCKWASSDNGKCCSGEAKFDGDELQKKSVSXQLRYR 134

Query: 483 GTSQYPDDKEFRRKASPVSPRSPLTGDDQVQKERSKSLSVFGKLVSPKLREAQVSFETAL 662
           GTSQ  + +E + K SP S  SPL+ D  VQK+R KSLSVFG LVSPKLR AQ SFETAL
Sbjct: 135 GTSQXDEPQEIQEK-SPTSNGSPLSLDSPVQKQRHKSLSVFGTLVSPKLRAAQFSFETAL 193

Query: 663 ETLIKIANVRSLMLSAHAQVQQDL 734
           E +++IAN+RS MLSA  QVQ+D+
Sbjct: 194 EXIVEIANMRSSMLSAFDQVQKDI 217


>ref|XP_002307800.1| predicted protein [Populus trichocarpa] gi|222857249|gb|EEE94796.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score =  183 bits (465), Expect = 5e-44
 Identities = 107/203 (52%), Positives = 137/203 (67%), Gaps = 1/203 (0%)
 Frame = +3

Query: 129 DGKVLQFLDSMDSYLTLMDSLSSTLRQGWIELASARYSMGASRVTSALYDLKLHPAVTTL 308
           D  VL+F+DS DSYLTL+DSLSSTLRQGW++LA AR SMGASR+  AL D KLH A T++
Sbjct: 20  DEDVLRFMDSTDSYLTLLDSLSSTLRQGWLDLAIARQSMGASRINGALLDHKLHSAATSV 79

Query: 309 QVRQLDGESPRQDPMVEEPHFTLSRWLYSSE-DYCYSRETGSDEADPKNKNSSSLLRHRG 485
           QV Q D      D M  +P F L +W   ++   CY  +   ++  P  K+ S  LRHRG
Sbjct: 80  QVDQED-----VDSMEAQPRFILRKWASVADGKQCYEEQKLGEDKLP-GKSGSLQLRHRG 133

Query: 486 TSQYPDDKEFRRKASPVSPRSPLTGDDQVQKERSKSLSVFGKLVSPKLREAQVSFETALE 665
            SQ  ++K     A        L  DDQVQKER+K LS+FG L+SPKLR AQ+SFETALE
Sbjct: 134 DSQLSEEKTSESGAQ-------LDVDDQVQKERAKLLSMFGTLISPKLRAAQLSFETALE 186

Query: 666 TLIKIANVRSLMLSAHAQVQQDL 734
           TL+KIAN+RS MLS++ +V+++L
Sbjct: 187 TLVKIANMRSAMLSSYDRVRKEL 209


>ref|XP_002510697.1| conserved hypothetical protein [Ricinus communis]
           gi|223551398|gb|EEF52884.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 212

 Score =  174 bits (442), Expect = 2e-41
 Identities = 106/204 (51%), Positives = 134/204 (65%), Gaps = 1/204 (0%)
 Frame = +3

Query: 129 DGKVLQFLDSMDSYLTLMDSLSSTLRQGWIELASARYSMGASRVTSALYDLKLHPAVTTL 308
           D  VLQFLDS+DSYLTL DSLSSTLRQGW+ELASAR+SMGA R+ S+L DLK HPA T+L
Sbjct: 35  DDNVLQFLDSVDSYLTLFDSLSSTLRQGWLELASARHSMGALRLNSSLLDLKSHPASTSL 94

Query: 309 QV-RQLDGESPRQDPMVEEPHFTLSRWLYSSEDYCYSRETGSDEADPKNKNSSSLLRHRG 485
           Q+ +  +G          EP F L +WL               + D +N N   LL   G
Sbjct: 95  QLTKHHEG----------EPQFILRKWL------------SLGDCDEQNTN-DDLLEKSG 131

Query: 486 TSQYPDDKEFRRKASPVSPRSPLTGDDQVQKERSKSLSVFGKLVSPKLREAQVSFETALE 665
           T Q  +++   ++AS          DD+VQKERS+SLSVFG LVSPKLR AQ+SFETALE
Sbjct: 132 TPQLSEEETSPKQASS-------KADDKVQKERSRSLSVFGTLVSPKLRAAQLSFETALE 184

Query: 666 TLIKIANVRSLMLSAHAQVQQDLH 737
           T+++IAN+RS MLSA  +V ++L+
Sbjct: 185 TVVEIANMRSAMLSAFDRVHEELN 208


>ref|XP_002893129.1| hypothetical protein ARALYDRAFT_472313 [Arabidopsis lyrata subsp.
           lyrata] gi|297338971|gb|EFH69388.1| hypothetical protein
           ARALYDRAFT_472313 [Arabidopsis lyrata subsp. lyrata]
          Length = 215

 Score =  171 bits (434), Expect = 2e-40
 Identities = 101/203 (49%), Positives = 130/203 (64%), Gaps = 3/203 (1%)
 Frame = +3

Query: 129 DGKVLQFLDSMDSYLTLMDSLSSTLRQGWIELASARYSMGASRVTSALYDLKLHPAVTTL 308
           D  VLQFLDS+D YLTLMDSL+S LR+GW +LASAR+SMG  R+ S L DLK HPA +TL
Sbjct: 30  DENVLQFLDSLDGYLTLMDSLNSKLREGWFDLASARHSMGTLRINSTLLDLKYHPAASTL 89

Query: 309 QVRQLDGESPRQDPMVEEPHFTLSRWLY---SSEDYCYSRETGSDEADPKNKNSSSLLRH 479
           QV   + ES     +   PHF LS+W     S +    S +T S+   P     S  LRH
Sbjct: 90  QVTDQEVES-----LGSVPHFALSKWASKGGSGKGKDLSTDTDSEIGSP----LSPQLRH 140

Query: 480 RGTSQYPDDKEFRRKASPVSPRSPLTGDDQVQKERSKSLSVFGKLVSPKLREAQVSFETA 659
           RG         F  +       + L  D++++KER+KSLSVFG LVSPKLR AQ+SFETA
Sbjct: 141 RG---------FSEEKPSAKDETILVADEEIKKERAKSLSVFGGLVSPKLRGAQLSFETA 191

Query: 660 LETLIKIANVRSLMLSAHAQVQQ 728
           LETL++IAN+R+ MLSA  ++++
Sbjct: 192 LETLVEIANMRASMLSAFERIKE 214


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