BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004855
         (926 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20609.3| unnamed protein product [Vitis vinifera]              110   6e-22
ref|XP_002278577.1| PREDICTED: protein EARLY FLOWERING 3-like [V...   110   6e-22
ref|XP_002303218.1| predicted protein [Populus trichocarpa] gi|2...   108   2e-21
ref|XP_002515898.1| hypothetical protein RCOM_1486170 [Ricinus c...   106   9e-21
ref|XP_002309522.1| predicted protein [Populus trichocarpa] gi|2...   104   3e-20

>emb|CBI20609.3| unnamed protein product [Vitis vinifera]
          Length = 671

 Score =  110 bits (274), Expect = 6e-22
 Identities = 56/91 (61%), Positives = 64/91 (70%)
 Frame = -2

Query: 526 MKGGKDEDKNTGPMFPRLHVNDTEKGGPRAPPRNKMALYEQLSIPSQRSASTLPTGRNTX 347
           MK GKDE+K  GPMFPRLHVNDTEKGGPRAPPRNKMALYEQLS+PSQR    +   ++  
Sbjct: 1   MKRGKDEEKIMGPMFPRLHVNDTEKGGPRAPPRNKMALYEQLSVPSQRCNPGVMPLKSNN 60

Query: 346 XXXXXXXXXXSQGAGNARSVFPPFYIPPSTP 254
                     SQG+G+ R VF P +I PSTP
Sbjct: 61  ASNLVPPASSSQGSGHERGVFFPHHISPSTP 91


>ref|XP_002278577.1| PREDICTED: protein EARLY FLOWERING 3-like [Vitis vinifera]
          Length = 725

 Score =  110 bits (274), Expect = 6e-22
 Identities = 56/91 (61%), Positives = 64/91 (70%)
 Frame = -2

Query: 526 MKGGKDEDKNTGPMFPRLHVNDTEKGGPRAPPRNKMALYEQLSIPSQRSASTLPTGRNTX 347
           MK GKDE+K  GPMFPRLHVNDTEKGGPRAPPRNKMALYEQLS+PSQR    +   ++  
Sbjct: 1   MKRGKDEEKIMGPMFPRLHVNDTEKGGPRAPPRNKMALYEQLSVPSQRCNPGVMPLKSNN 60

Query: 346 XXXXXXXXXXSQGAGNARSVFPPFYIPPSTP 254
                     SQG+G+ R VF P +I PSTP
Sbjct: 61  ASNLVPPASSSQGSGHERGVFFPHHISPSTP 91


>ref|XP_002303218.1| predicted protein [Populus trichocarpa] gi|222840650|gb|EEE78197.1|
           predicted protein [Populus trichocarpa]
          Length = 765

 Score =  108 bits (270), Expect = 2e-21
 Identities = 78/182 (42%), Positives = 92/182 (50%), Gaps = 8/182 (4%)
 Frame = -2

Query: 526 MKGGKDEDKNTGPMFPRLHVNDTEKGGPRAPPRNKMALYEQLSIPSQR----SASTLPTG 359
           M+G KDE+K T PMFPRLHVND EKGGPRAPPRNKMALYEQL IPSQR    S S LP  
Sbjct: 1   MRGAKDEEKMTSPMFPRLHVNDAEKGGPRAPPRNKMALYEQLCIPSQRFSSGSGSMLPVL 60

Query: 358 RNTXXXXXXXXXXXSQGAGNARSVFPPFYIPPSTPAXXXXXXXXXXXDGMHLRTKANKCE 179
            N            S G G+ RSVF P    P TP             G+         E
Sbjct: 61  PNN-GSSLAPSISSSHGTGHERSVFTPVSNSP-TPLHLTEKLFYYSSGGVKSSALMTSQE 118

Query: 178 STSMKPTNYRTSNTSVRPLS-TSECGSF---PLFNSKKSILNNLGIDNDFSVPTFVDPGN 11
              ++ TN +  NTS RPLS ++ C SF    + + K      LG +ND    +    G+
Sbjct: 119 EKIVEVTNDQNLNTS-RPLSFSATCNSFQSHKVSDIKNFSWKKLGDENDSRFHSSAQSGS 177

Query: 10  TL 5
            L
Sbjct: 178 NL 179


>ref|XP_002515898.1| hypothetical protein RCOM_1486170 [Ricinus communis]
           gi|223544803|gb|EEF46318.1| hypothetical protein
           RCOM_1486170 [Ricinus communis]
          Length = 783

 Score =  106 bits (264), Expect = 9e-21
 Identities = 78/178 (43%), Positives = 90/178 (50%), Gaps = 14/178 (7%)
 Frame = -2

Query: 526 MKGGKDEDKNTGPMFPRLHVNDTEKGGPRAPPRNKMALYEQLSIPSQR----SASTLPTG 359
           M+G KDEDK   PMFPRLHVNDTEKGGPRAPPRNKMALYEQL IPS++    SAS LP  
Sbjct: 2   MRGTKDEDKMISPMFPRLHVNDTEKGGPRAPPRNKMALYEQLGIPSRKVSSGSASMLPLP 61

Query: 358 RNT-------XXXXXXXXXXXSQGAGNARSVFPPFYIPPSTPAXXXXXXXXXXXDGMHLR 200
            N                   SQ +GN RSVF PF   P+              DG+   
Sbjct: 62  PNNGSTFVPKMLPSHVTSDSCSQVSGNERSVFTPFCNSPA--PSHSEKSFSYSSDGIKRS 119

Query: 199 TKANKCESTSMKPTNYRTSNTSVRPLSTSECGSFPLFN---SKKSILNNLGIDNDFSV 35
            K    E  SM  TN ++  T+   LS +   SF L N    K      +G +NDF V
Sbjct: 120 NKMENQEWKSMNCTNGQSLKTTQSLLSNAS-NSFQLHNFSHLKNFSWKKIGYENDFRV 176


>ref|XP_002309522.1| predicted protein [Populus trichocarpa] gi|222855498|gb|EEE93045.1|
           predicted protein [Populus trichocarpa]
          Length = 663

 Score =  104 bits (260), Expect = 3e-20
 Identities = 68/171 (39%), Positives = 82/171 (47%)
 Frame = -2

Query: 526 MKGGKDEDKNTGPMFPRLHVNDTEKGGPRAPPRNKMALYEQLSIPSQRSASTLPTGRNTX 347
           MK GKD DK  GPMFPRLHVNDT+KGGPRAPPRNKMALYEQLSIPSQR    +    ++ 
Sbjct: 1   MKRGKDYDKIMGPMFPRLHVNDTDKGGPRAPPRNKMALYEQLSIPSQRFNPDVLPRNSSN 60

Query: 346 XXXXXXXXXXSQGAGNARSVFPPFYIPPSTPAXXXXXXXXXXXDGMHLRTKANKCESTSM 167
                     SQG+G  R    P Y+P  TP                     +  E    
Sbjct: 61  TSDLAPTGSSSQGSGLERHFPYPHYVPSPTP--------------------TDVAEKYHS 100

Query: 166 KPTNYRTSNTSVRPLSTSECGSFPLFNSKKSILNNLGIDNDFSVPTFVDPG 14
           +  + R  NT V PL   +                +G ++DF+VP FV  G
Sbjct: 101 RQPDGRNLNTPVAPLMQRK---------------KVGEEDDFTVPVFVHSG 136