BLASTX nr result

ID: Coptis24_contig00004851 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004851
         (1432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272682.1| PREDICTED: mitochondrial thiamine pyrophosph...   524   e-146
ref|XP_002516904.1| Mitochondrial deoxynucleotide carrier, putat...   517   e-144
ref|XP_002314452.1| predicted protein [Populus trichocarpa] gi|2...   517   e-144
ref|XP_002330367.1| predicted protein [Populus trichocarpa] gi|2...   516   e-144
ref|XP_003533430.1| PREDICTED: mitochondrial thiamine pyrophosph...   504   e-140

>ref|XP_002272682.1| PREDICTED: mitochondrial thiamine pyrophosphate carrier [Vitis
            vinifera] gi|297736865|emb|CBI26066.3| unnamed protein
            product [Vitis vinifera]
          Length = 330

 Score =  524 bits (1350), Expect = e-146
 Identities = 264/331 (79%), Positives = 283/331 (85%)
 Frame = -1

Query: 1219 MEEPGQLKRAFMDXXXXXXXXXISRTVTSPLDVIKIRFQVQLEPTSSWHLLRKDVYGPSK 1040
            MEEPGQLKRAF+D         ISRTVTSPLDVIKIRFQVQLEPT+SW LLR+DV+G SK
Sbjct: 1    MEEPGQLKRAFIDAAAGAIAGGISRTVTSPLDVIKIRFQVQLEPTTSWALLRRDVHGQSK 60

Query: 1039 YTGMGQATKDIFREEGLKGFWRGNVPALLMVMPYGAIQFSVLHKLKAFASGSSKSEDHIH 860
            YTGM QATKDIFREEGL GFWRGNVPALLMVMPY AIQF+VLHKLK FA+GSSKSEDHIH
Sbjct: 61   YTGMLQATKDIFREEGLPGFWRGNVPALLMVMPYTAIQFTVLHKLKTFAAGSSKSEDHIH 120

Query: 859  LSPYLSYLSGALAGCAATVGSYPFDLLRTLLASQGEPKVYSTMRAAFLDIVKARGIPGLY 680
            LSPYLS++SGALAGCAATVGSYPFDLLRTLLASQGEPKVY  MR+AFLDI++ RG  GLY
Sbjct: 121  LSPYLSFVSGALAGCAATVGSYPFDLLRTLLASQGEPKVYPKMRSAFLDIIRTRGFQGLY 180

Query: 679  AGLTPTLVEIIPYAGLQFGTYDTFKRWTMGWNKFRHXXXXXXXXXXXXXXXXXXLCGLAA 500
            AGL+PTLVEIIPYAGLQFGTYD FKRWTM WN++R                   LCG AA
Sbjct: 181  AGLSPTLVEIIPYAGLQFGTYDMFKRWTMAWNQYR-SSNANLTGTDSISSFQLFLCGFAA 239

Query: 499  GTCAKAVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRGMHDALRRILQAEGWAGLYKG 320
            GTCAKAVCHPLDVVKKRFQIEGL R PKYGARVEHRAY  M+DALR+IL  EGWAGLYKG
Sbjct: 240  GTCAKAVCHPLDVVKKRFQIEGLPRDPKYGARVEHRAYTNMYDALRQILLVEGWAGLYKG 299

Query: 319  IVPSIIKAAPAGAVTFVAYEFTSDWLESILT 227
            IVPSIIK+APAGAVTFVAYEFTSDWLES++T
Sbjct: 300  IVPSIIKSAPAGAVTFVAYEFTSDWLESMVT 330


>ref|XP_002516904.1| Mitochondrial deoxynucleotide carrier, putative [Ricinus communis]
            gi|223543992|gb|EEF45518.1| Mitochondrial deoxynucleotide
            carrier, putative [Ricinus communis]
          Length = 331

 Score =  517 bits (1332), Expect = e-144
 Identities = 261/331 (78%), Positives = 277/331 (83%)
 Frame = -1

Query: 1219 MEEPGQLKRAFMDXXXXXXXXXISRTVTSPLDVIKIRFQVQLEPTSSWHLLRKDVYGPSK 1040
            M EPGQ+KRA +D         ISRTVTSPLDVIKIRFQVQLEPTSSW L+R ++ G SK
Sbjct: 1    MGEPGQIKRALIDTTAGAISGAISRTVTSPLDVIKIRFQVQLEPTSSWALVRGNMIGQSK 60

Query: 1039 YTGMGQATKDIFREEGLKGFWRGNVPALLMVMPYGAIQFSVLHKLKAFASGSSKSEDHIH 860
            YTGM QA KDIFREEGL GFWRGNVPALLMVMPY AIQF+VLHKLK  A+GSSKSE+HI 
Sbjct: 61   YTGMLQAAKDIFREEGLPGFWRGNVPALLMVMPYTAIQFTVLHKLKTVAAGSSKSENHIQ 120

Query: 859  LSPYLSYLSGALAGCAATVGSYPFDLLRTLLASQGEPKVYSTMRAAFLDIVKARGIPGLY 680
            LSPYLSY+SGALAGCAATVGSYPFDLLRT+LASQGEPKVY TMR AF+DI++ RG  GLY
Sbjct: 121  LSPYLSYISGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRYAFIDIIRTRGFKGLY 180

Query: 679  AGLTPTLVEIIPYAGLQFGTYDTFKRWTMGWNKFRHXXXXXXXXXXXXXXXXXXLCGLAA 500
            AGL+PTLVEIIPYAGLQFGTYDTFKRW M WN  R                   +CGLAA
Sbjct: 181  AGLSPTLVEIIPYAGLQFGTYDTFKRWMMAWNCRRSSSTSSTYIDNSPSSFQLFVCGLAA 240

Query: 499  GTCAKAVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRGMHDALRRILQAEGWAGLYKG 320
            GTCAK VCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYR M DALRRILQAEGWAGLYKG
Sbjct: 241  GTCAKLVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRNMADALRRILQAEGWAGLYKG 300

Query: 319  IVPSIIKAAPAGAVTFVAYEFTSDWLESILT 227
            I+PS IKAAPAGAVTFVAYEFTSDWLESILT
Sbjct: 301  ILPSTIKAAPAGAVTFVAYEFTSDWLESILT 331


>ref|XP_002314452.1| predicted protein [Populus trichocarpa] gi|222863492|gb|EEF00623.1|
            predicted protein [Populus trichocarpa]
          Length = 339

 Score =  517 bits (1331), Expect = e-144
 Identities = 258/327 (78%), Positives = 274/327 (83%)
 Frame = -1

Query: 1207 GQLKRAFMDXXXXXXXXXISRTVTSPLDVIKIRFQVQLEPTSSWHLLRKDVYGPSKYTGM 1028
            GQ+KRA +D         ISRTVTSPLDVIKIRFQVQLEPTS W L+R +V  PSKYTGM
Sbjct: 13   GQIKRALIDATAGAIAGGISRTVTSPLDVIKIRFQVQLEPTSLWALVRSNVTAPSKYTGM 72

Query: 1027 GQATKDIFREEGLKGFWRGNVPALLMVMPYGAIQFSVLHKLKAFASGSSKSEDHIHLSPY 848
             QATKDIFREEGL GFWRGNVPALLMVMPY AIQF+VLHKLK FA+GSSK+EDHI LSPY
Sbjct: 73   LQATKDIFREEGLPGFWRGNVPALLMVMPYTAIQFAVLHKLKTFAAGSSKTEDHIQLSPY 132

Query: 847  LSYLSGALAGCAATVGSYPFDLLRTLLASQGEPKVYSTMRAAFLDIVKARGIPGLYAGLT 668
            LSY SGALAGCAATVGSYPFDLLRT+LASQGEPKVY TMR+AF+DIV+ RG  GLYAGL+
Sbjct: 133  LSYASGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIVRTRGFRGLYAGLS 192

Query: 667  PTLVEIIPYAGLQFGTYDTFKRWTMGWNKFRHXXXXXXXXXXXXXXXXXXLCGLAAGTCA 488
            PTLVEI+PYAGLQFGTYDTFKRWTM WN  +                   +CGLAAGTCA
Sbjct: 193  PTLVEIVPYAGLQFGTYDTFKRWTMAWNHHKSSSTSSISTDDNLSSFQLFICGLAAGTCA 252

Query: 487  KAVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRGMHDALRRILQAEGWAGLYKGIVPS 308
            K VCHPLDVVKKRFQIEGLQRHPKYG RVEHRAYR M DALRRILQ EGWAGLYKGIVPS
Sbjct: 253  KLVCHPLDVVKKRFQIEGLQRHPKYGGRVEHRAYRNMFDALRRILQTEGWAGLYKGIVPS 312

Query: 307  IIKAAPAGAVTFVAYEFTSDWLESILT 227
             +KAAPAGAVTFVAYEFTSDWLESILT
Sbjct: 313  TVKAAPAGAVTFVAYEFTSDWLESILT 339


>ref|XP_002330367.1| predicted protein [Populus trichocarpa] gi|222871571|gb|EEF08702.1|
            predicted protein [Populus trichocarpa]
          Length = 329

 Score =  516 bits (1328), Expect = e-144
 Identities = 255/328 (77%), Positives = 275/328 (83%)
 Frame = -1

Query: 1216 EEPGQLKRAFMDXXXXXXXXXISRTVTSPLDVIKIRFQVQLEPTSSWHLLRKDVYGPSKY 1037
            E PGQLKRA +D         ISRTVTSPLDVIKIRFQVQLEPT SW L+R+++  PSKY
Sbjct: 1    EAPGQLKRALIDATAGAIAGGISRTVTSPLDVIKIRFQVQLEPTYSWDLVRRNMTAPSKY 60

Query: 1036 TGMGQATKDIFREEGLKGFWRGNVPALLMVMPYGAIQFSVLHKLKAFASGSSKSEDHIHL 857
            TGM QATKDIFREEGL GFWRGNVPALLMVMPY AIQF+VLHKLK FA+GSSK+EDHIHL
Sbjct: 61   TGMLQATKDIFREEGLPGFWRGNVPALLMVMPYTAIQFAVLHKLKTFAAGSSKTEDHIHL 120

Query: 856  SPYLSYLSGALAGCAATVGSYPFDLLRTLLASQGEPKVYSTMRAAFLDIVKARGIPGLYA 677
            SPYLSY+SGALAGC ATVGSYPFDLLRT+LASQGEPKVY TMR+AF+DI + RG  GLYA
Sbjct: 121  SPYLSYISGALAGCTATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDITRTRGFRGLYA 180

Query: 676  GLTPTLVEIIPYAGLQFGTYDTFKRWTMGWNKFRHXXXXXXXXXXXXXXXXXXLCGLAAG 497
            GL+PTLVEI+PYAGLQFGTYDTFKRWTMGWN  R                   +CGLAAG
Sbjct: 181  GLSPTLVEIVPYAGLQFGTYDTFKRWTMGWNHDRSSTTSFISTDDSLSSFQLFVCGLAAG 240

Query: 496  TCAKAVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRGMHDALRRILQAEGWAGLYKGI 317
            TCAK VCHPLDVVKKRFQIEGLQRHP+YGARVEH AY+ M DAL RILQ EGWAGLYKGI
Sbjct: 241  TCAKLVCHPLDVVKKRFQIEGLQRHPRYGARVEHHAYKNMFDALSRILQMEGWAGLYKGI 300

Query: 316  VPSIIKAAPAGAVTFVAYEFTSDWLESI 233
            VPS +KAAPAGAVTF+AYEFTSDWLESI
Sbjct: 301  VPSTVKAAPAGAVTFLAYEFTSDWLESI 328


>ref|XP_003533430.1| PREDICTED: mitochondrial thiamine pyrophosphate carrier-like [Glycine
            max]
          Length = 328

 Score =  504 bits (1297), Expect = e-140
 Identities = 254/329 (77%), Positives = 278/329 (84%)
 Frame = -1

Query: 1213 EPGQLKRAFMDXXXXXXXXXISRTVTSPLDVIKIRFQVQLEPTSSWHLLRKDVYGPSKYT 1034
            EP QLKRA +D         ISRTVTSPLDVIKIRFQVQLEPTSSW LLRKD+  PSKYT
Sbjct: 4    EPSQLKRAAIDASAGAISGGISRTVTSPLDVIKIRFQVQLEPTSSWTLLRKDLSTPSKYT 63

Query: 1033 GMGQATKDIFREEGLKGFWRGNVPALLMVMPYGAIQFSVLHKLKAFASGSSKSEDHIHLS 854
            GM QA+KDIFREEG+ GFWRGNVPALLMVMPY AIQF+VLHKLK FA+GSSK+E+HI+LS
Sbjct: 64   GMLQASKDIFREEGIWGFWRGNVPALLMVMPYTAIQFTVLHKLKTFAAGSSKTENHINLS 123

Query: 853  PYLSYLSGALAGCAATVGSYPFDLLRTLLASQGEPKVYSTMRAAFLDIVKARGIPGLYAG 674
            PYLSY+SGALAGCAATVGSYPFDLLRT+LASQGEPKVY  MRAA +DI++ RG  GLYAG
Sbjct: 124  PYLSYMSGALAGCAATVGSYPFDLLRTILASQGEPKVYPNMRAALVDILQTRGFRGLYAG 183

Query: 673  LTPTLVEIIPYAGLQFGTYDTFKRWTMGWNKFRHXXXXXXXXXXXXXXXXXXLCGLAAGT 494
            L+PTLVEIIPYAGLQFGTYDTFKRWTM WN+ ++                  LCGLAAGT
Sbjct: 184  LSPTLVEIIPYAGLQFGTYDTFKRWTMAWNQRQY----SNPTAESLSSFQLFLCGLAAGT 239

Query: 493  CAKAVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRGMHDALRRILQAEGWAGLYKGIV 314
            CAK VCHPLDVVKKRFQIEGLQRHP+YGARVEHRAY+ M DA++RILQ EGWAGLYKGI+
Sbjct: 240  CAKLVCHPLDVVKKRFQIEGLQRHPRYGARVEHRAYKNMLDAMKRILQMEGWAGLYKGIL 299

Query: 313  PSIIKAAPAGAVTFVAYEFTSDWLESILT 227
            PS +KAAPAGAVTFVAYE T DWLESILT
Sbjct: 300  PSTVKAAPAGAVTFVAYELTVDWLESILT 328


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