BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004817
         (1643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK94156.1| unknown [Populus trichocarpa]                          691   0.0  
ref|XP_002331138.1| predicted protein [Populus trichocarpa] gi|2...   689   0.0  
ref|XP_002524302.1| 60S ribosomal protein L3, putative [Ricinus ...   686   0.0  
ref|XP_002263053.2| PREDICTED: 60S ribosomal protein L3 [Vitis v...   685   0.0  
emb|CAN83050.1| hypothetical protein VITISV_042376 [Vitis vinifera]   684   0.0  

>gb|ABK94156.1| unknown [Populus trichocarpa]
          Length = 389

 Score =  691 bits (1782), Expect = 0.0
 Identities = 336/407 (82%), Positives = 356/407 (87%)
 Frame = +3

Query: 69   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPTKPCRLTAFLGYKAGMTHIVRDV 248
            MSHRKFEHPRHGSLGFLPRKRASRHRGK K+FP+DDPTKPCRLTAFLGYKAGMTHIVR+V
Sbjct: 1    MSHRKFEHPRHGSLGFLPRKRASRHRGKAKSFPKDDPTKPCRLTAFLGYKAGMTHIVREV 60

Query: 249  EKPGSKLHKKEACEAVTIVEAPPMIVVGVVGYVKTPRGLRSLCTVWAQHLNNEVRRRFYK 428
            EKPGSKLHKKE CEAVTI+E PPM+VVGVVGYV TP GLRSL TVWAQHL+ EVRRRFYK
Sbjct: 61   EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVNTPGGLRSLSTVWAQHLSEEVRRRFYK 120

Query: 429  HWCXXXXXXXXXXXXXXETDEGKKDIQSQLEKMKKYCTVIRVLAHTQITKMKGLKQKKAH 608
            +WC              E+++GKKDIQ+QLEK+KKYCTVIRVLAHTQI KMKGLKQKKAH
Sbjct: 121  NWCKSKKKAFTKYCKKYESEDGKKDIQAQLEKLKKYCTVIRVLAHTQIRKMKGLKQKKAH 180

Query: 609  LMEIQVNGGDTAKKVDFAYSFFEKPVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 788
            LMEIQVNGGD AKKVDFAYSFFEK +P+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181  LMEIQVNGGDVAKKVDFAYSFFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 789  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTXXXXXXXXXXXXXXXXXXXXX 968
            LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRT                     
Sbjct: 241  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRT-------------------EL 281

Query: 969  XKKIYKLGKADQESHTADTEYDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVT 1148
             KKIYKLGK  QESH A TEYDRTEKDITP+GGFPHYGVVK DYLMIKGCCVGPKKRVVT
Sbjct: 282  SKKIYKLGKCGQESHCAVTEYDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVT 341

Query: 1149 LRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTEEKSKFYGRVK 1289
            LRQSLLKQTSR+A+EEIKLKFIDTSSKFGHGRFQTTEEK+KFYGR+K
Sbjct: 342  LRQSLLKQTSRVAMEEIKLKFIDTSSKFGHGRFQTTEEKAKFYGRLK 388


>ref|XP_002331138.1| predicted protein [Populus trichocarpa] gi|222872866|gb|EEF09997.1|
            predicted protein [Populus trichocarpa]
          Length = 389

 Score =  689 bits (1778), Expect = 0.0
 Identities = 335/407 (82%), Positives = 355/407 (87%)
 Frame = +3

Query: 69   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPTKPCRLTAFLGYKAGMTHIVRDV 248
            MSHRKFEHPRHGSLGFLPRKRASRHRGK K+FP+DDPTKPCRLTAFLGYKAGMTHIVR+V
Sbjct: 1    MSHRKFEHPRHGSLGFLPRKRASRHRGKAKSFPKDDPTKPCRLTAFLGYKAGMTHIVREV 60

Query: 249  EKPGSKLHKKEACEAVTIVEAPPMIVVGVVGYVKTPRGLRSLCTVWAQHLNNEVRRRFYK 428
            EKPGSKLHKKE CEAVTI+E PPM+VVGVVGYV TP GLRSL TVWAQHL+ EVRRRFYK
Sbjct: 61   EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVNTPGGLRSLSTVWAQHLSEEVRRRFYK 120

Query: 429  HWCXXXXXXXXXXXXXXETDEGKKDIQSQLEKMKKYCTVIRVLAHTQITKMKGLKQKKAH 608
            +WC              E+++GKKDIQ+QLEK+KKYCTVIRVL HTQI KMKGLKQKKAH
Sbjct: 121  NWCKSKKKAFTKYCKKYESEDGKKDIQAQLEKLKKYCTVIRVLVHTQIRKMKGLKQKKAH 180

Query: 609  LMEIQVNGGDTAKKVDFAYSFFEKPVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 788
            LMEIQVNGGD AKKVDFAYSFFEK +P+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181  LMEIQVNGGDVAKKVDFAYSFFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 789  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTXXXXXXXXXXXXXXXXXXXXX 968
            LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRT                     
Sbjct: 241  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRT-------------------EL 281

Query: 969  XKKIYKLGKADQESHTADTEYDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVT 1148
             KKIYKLGK  QESH A TEYDRTEKDITP+GGFPHYGVVK DYLMIKGCCVGPKKRVVT
Sbjct: 282  NKKIYKLGKCGQESHCAVTEYDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVT 341

Query: 1149 LRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTEEKSKFYGRVK 1289
            LRQSLLKQTSR+A+EEIKLKFIDTSSKFGHGRFQTTEEK+KFYGR+K
Sbjct: 342  LRQSLLKQTSRVAMEEIKLKFIDTSSKFGHGRFQTTEEKAKFYGRLK 388


>ref|XP_002524302.1| 60S ribosomal protein L3, putative [Ricinus communis]
            gi|223536393|gb|EEF38042.1| 60S ribosomal protein L3,
            putative [Ricinus communis]
          Length = 389

 Score =  686 bits (1769), Expect = 0.0
 Identities = 337/408 (82%), Positives = 355/408 (87%)
 Frame = +3

Query: 69   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPTKPCRLTAFLGYKAGMTHIVRDV 248
            MSHRKFEHPRHGSLGFLPRKRASR RGKVKAFP+DDPTKPC+LTAFLGYKAGMTHI+R+V
Sbjct: 1    MSHRKFEHPRHGSLGFLPRKRASRQRGKVKAFPKDDPTKPCKLTAFLGYKAGMTHIMREV 60

Query: 249  EKPGSKLHKKEACEAVTIVEAPPMIVVGVVGYVKTPRGLRSLCTVWAQHLNNEVRRRFYK 428
            EKPGSKLHKKE CEAVTI+E PPM++VGVVGYVKTPRGLRSL TVWAQHL+ EV+RRFYK
Sbjct: 61   EKPGSKLHKKETCEAVTIIETPPMVIVGVVGYVKTPRGLRSLNTVWAQHLSEEVKRRFYK 120

Query: 429  HWCXXXXXXXXXXXXXXETDEGKKDIQSQLEKMKKYCTVIRVLAHTQITKMKGLKQKKAH 608
            +WC              ET+EGKK IQ+QLEKMKKY TVIRVLAHTQI KMKGLKQKKAH
Sbjct: 121  NWCKSKKKAFTKYSRQLETEEGKKSIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 609  LMEIQVNGGDTAKKVDFAYSFFEKPVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 788
            LMEIQVNGG  A+KVDFAY FFEK VP+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181  LMEIQVNGGTIAQKVDFAYGFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 789  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTXXXXXXXXXXXXXXXXXXXXX 968
            LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRT                     
Sbjct: 241  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRT-------------------EM 281

Query: 969  XKKIYKLGKADQESHTADTEYDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVT 1148
             KKIYKLGK  QESHTA TEYDRTEKDITP+GGFPHYGVVK DYLMIKGCCVGPKKRVVT
Sbjct: 282  NKKIYKLGKGGQESHTAITEYDRTEKDITPIGGFPHYGVVKDDYLMIKGCCVGPKKRVVT 341

Query: 1149 LRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTEEKSKFYGRVKA 1292
            LRQSLLKQTSR+ALEEIKLKFIDTSSKFGHGRFQTT+EK KFYGR+KA
Sbjct: 342  LRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKFYGRLKA 389


>ref|XP_002263053.2| PREDICTED: 60S ribosomal protein L3 [Vitis vinifera]
            gi|297739519|emb|CBI29701.3| unnamed protein product
            [Vitis vinifera]
          Length = 389

 Score =  685 bits (1768), Expect = 0.0
 Identities = 331/408 (81%), Positives = 358/408 (87%)
 Frame = +3

Query: 69   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPTKPCRLTAFLGYKAGMTHIVRDV 248
            MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFP+DDPT PCRLTAFLGYKAGMTHIVR+V
Sbjct: 1    MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTNPCRLTAFLGYKAGMTHIVREV 60

Query: 249  EKPGSKLHKKEACEAVTIVEAPPMIVVGVVGYVKTPRGLRSLCTVWAQHLNNEVRRRFYK 428
            EKPGSKLHKKE CEAVTI+E PPM+VVGVVGY+KTPRGLRSL TVWAQHL+ EV+RRFYK
Sbjct: 61   EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYLKTPRGLRSLNTVWAQHLSEEVKRRFYK 120

Query: 429  HWCXXXXXXXXXXXXXXETDEGKKDIQSQLEKMKKYCTVIRVLAHTQITKMKGLKQKKAH 608
            +WC              E+++GKKDIQ+QLEKMKKYC VIRVLAHTQI KMKGLKQKKAH
Sbjct: 121  NWCKSKKKAFTKYSKKYESEDGKKDIQAQLEKMKKYCNVIRVLAHTQIRKMKGLKQKKAH 180

Query: 609  LMEIQVNGGDTAKKVDFAYSFFEKPVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 788
            LMEIQVNGGD AKKVD+AY FFEK +P+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181  LMEIQVNGGDVAKKVDYAYGFFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 789  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTXXXXXXXXXXXXXXXXXXXXX 968
            LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRT                     
Sbjct: 241  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRT-------------------EM 281

Query: 969  XKKIYKLGKADQESHTADTEYDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVT 1148
             KKIYK+GK  QESH+A TE+DRTEKDITPMGGFPHYGVVK DYL+IKGCCVGPKKRVVT
Sbjct: 282  NKKIYKVGKTGQESHSAMTEFDRTEKDITPMGGFPHYGVVKDDYLLIKGCCVGPKKRVVT 341

Query: 1149 LRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTEEKSKFYGRVKA 1292
            LRQSLLKQTSR+A+EEIKLKFIDTSSKFGHGRFQTT+EK+KF+GR+KA
Sbjct: 342  LRQSLLKQTSRVAMEEIKLKFIDTSSKFGHGRFQTTQEKAKFFGRLKA 389


>emb|CAN83050.1| hypothetical protein VITISV_042376 [Vitis vinifera]
          Length = 389

 Score =  684 bits (1765), Expect = 0.0
 Identities = 331/408 (81%), Positives = 358/408 (87%)
 Frame = +3

Query: 69   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPTKPCRLTAFLGYKAGMTHIVRDV 248
            MSHRKFEHPRHGSLGFL RKRA+RHRGKVKAFP+DDPTKPCRLTAFLGYKAGMTHIVR+V
Sbjct: 1    MSHRKFEHPRHGSLGFLXRKRAARHRGKVKAFPKDDPTKPCRLTAFLGYKAGMTHIVREV 60

Query: 249  EKPGSKLHKKEACEAVTIVEAPPMIVVGVVGYVKTPRGLRSLCTVWAQHLNNEVRRRFYK 428
            EKPGSKLHKKE CEAVTI+E PPM+VVGVVGY+KTPRGLRSL TVWAQHL+ EV+RRFYK
Sbjct: 61   EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYLKTPRGLRSLNTVWAQHLSEEVKRRFYK 120

Query: 429  HWCXXXXXXXXXXXXXXETDEGKKDIQSQLEKMKKYCTVIRVLAHTQITKMKGLKQKKAH 608
            +WC              E+++GKKDIQ+QLEKMKKYC VIRVLAHTQI KMKGLKQKKAH
Sbjct: 121  NWCKSKKKAFTKYSKKYESEDGKKDIQAQLEKMKKYCNVIRVLAHTQIRKMKGLKQKKAH 180

Query: 609  LMEIQVNGGDTAKKVDFAYSFFEKPVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 788
            LMEIQVNGGD AKKVD+AY FFEK +P+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181  LMEIQVNGGDVAKKVDYAYGFFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 789  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTXXXXXXXXXXXXXXXXXXXXX 968
            LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRT                     
Sbjct: 241  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRT-------------------EM 281

Query: 969  XKKIYKLGKADQESHTADTEYDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVT 1148
             KKIYK+GK  QESH+A TE+DRTEKDITPMGGFPHYGVVK DYL+IKGCCVGPKKRVVT
Sbjct: 282  NKKIYKVGKTGQESHSAMTEFDRTEKDITPMGGFPHYGVVKDDYLLIKGCCVGPKKRVVT 341

Query: 1149 LRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTEEKSKFYGRVKA 1292
            LRQSLLKQTSR+A+EEIKLKFIDTSSKFGHGRFQTT+EK+KF+GR+KA
Sbjct: 342  LRQSLLKQTSRVAMEEIKLKFIDTSSKFGHGRFQTTQEKAKFFGRLKA 389