BLASTX nr result

ID: Coptis24_contig00004792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004792
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633838.1| PREDICTED: ABC transporter B family member 1...   149   3e-34
emb|CBI35014.3| unnamed protein product [Vitis vinifera]              149   3e-34
emb|CAN63836.1| hypothetical protein VITISV_036111 [Vitis vinifera]   149   3e-34
ref|XP_002324019.1| multidrug/pheromone exporter, MDR family, AB...   147   7e-34
ref|XP_002517423.1| multidrug resistance protein 1, 2, putative ...   147   9e-34

>ref|XP_003633838.1| PREDICTED: ABC transporter B family member 15-like [Vitis vinifera]
          Length = 1242

 Score =  149 bits (375), Expect = 3e-34
 Identities = 72/101 (71%), Positives = 85/101 (84%)
 Frame = +1

Query: 1    AAMGEILTTRIRYKMLSKIFTFEVGWFDQDANSSSTVCSRFAEDARVVR*LVGDRMAHLI 180
            AAMGE LT R+R +M SKI TFEVGWFDQD NS+  +CSR A+DA VVR LVGDRMA L+
Sbjct: 735  AAMGEYLTKRVRERMFSKILTFEVGWFDQDQNSTGAICSRLAKDANVVRSLVGDRMALLV 794

Query: 181  QTFSAVSLACTLGLLIAWRCTVVIIAVQPLIILCFYLRQVL 303
            QTFSAV +ACT+GL+IAWR  VV+IAVQPLII+C+Y R+VL
Sbjct: 795  QTFSAVIIACTMGLVIAWRLAVVMIAVQPLIIVCYYTRRVL 835


>emb|CBI35014.3| unnamed protein product [Vitis vinifera]
          Length = 1216

 Score =  149 bits (375), Expect = 3e-34
 Identities = 72/101 (71%), Positives = 85/101 (84%)
 Frame = +1

Query: 1    AAMGEILTTRIRYKMLSKIFTFEVGWFDQDANSSSTVCSRFAEDARVVR*LVGDRMAHLI 180
            AAMGE LT R+R +M SKI TFEVGWFDQD NS+  +CSR A+DA VVR LVGDRMA L+
Sbjct: 710  AAMGEYLTKRVRERMFSKILTFEVGWFDQDQNSTGAICSRLAKDANVVRSLVGDRMALLV 769

Query: 181  QTFSAVSLACTLGLLIAWRCTVVIIAVQPLIILCFYLRQVL 303
            QTFSAV +ACT+GL+IAWR  VV+IAVQPLII+C+Y R+VL
Sbjct: 770  QTFSAVIIACTMGLVIAWRLAVVMIAVQPLIIVCYYTRRVL 810


>emb|CAN63836.1| hypothetical protein VITISV_036111 [Vitis vinifera]
          Length = 815

 Score =  149 bits (375), Expect = 3e-34
 Identities = 72/101 (71%), Positives = 85/101 (84%)
 Frame = +1

Query: 1   AAMGEILTTRIRYKMLSKIFTFEVGWFDQDANSSSTVCSRFAEDARVVR*LVGDRMAHLI 180
           AAMGE LT R+R +M SKI TFEVGWFDQD NS+  +CSR A+DA VVR LVGDRMA L+
Sbjct: 307 AAMGEYLTKRVRERMFSKILTFEVGWFDQDQNSTGAICSRLAKDANVVRSLVGDRMALLV 366

Query: 181 QTFSAVSLACTLGLLIAWRCTVVIIAVQPLIILCFYLRQVL 303
           QTFSAV +ACT+GL+IAWR  VV+IAVQPLII+C+Y R+VL
Sbjct: 367 QTFSAVIIACTMGLVIAWRLAVVMIAVQPLIIVCYYTRRVL 407


>ref|XP_002324019.1| multidrug/pheromone exporter, MDR family, ABC transporter family
            [Populus trichocarpa] gi|222867021|gb|EEF04152.1|
            multidrug/pheromone exporter, MDR family, ABC transporter
            family [Populus trichocarpa]
          Length = 1242

 Score =  147 bits (372), Expect = 7e-34
 Identities = 72/101 (71%), Positives = 85/101 (84%)
 Frame = +1

Query: 1    AAMGEILTTRIRYKMLSKIFTFEVGWFDQDANSSSTVCSRFAEDARVVR*LVGDRMAHLI 180
            A MGE LT RIR +MLSKI TFEVGWFDQD NSS  +CSR A DA VVR LVGDRMA ++
Sbjct: 745  AYMGEHLTKRIRERMLSKILTFEVGWFDQDKNSSGAICSRLATDANVVRSLVGDRMALIV 804

Query: 181  QTFSAVSLACTLGLLIAWRCTVVIIAVQPLIILCFYLRQVL 303
            QT SAV++ACT+GL+IAWR  VV+IAVQP+II+CFY+R+VL
Sbjct: 805  QTISAVTIACTMGLIIAWRLAVVMIAVQPIIIVCFYVRRVL 845


>ref|XP_002517423.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
           gi|223543434|gb|EEF44965.1| multidrug resistance protein
           1, 2, putative [Ricinus communis]
          Length = 672

 Score =  147 bits (371), Expect = 9e-34
 Identities = 73/101 (72%), Positives = 84/101 (83%)
 Frame = +1

Query: 1   AAMGEILTTRIRYKMLSKIFTFEVGWFDQDANSSSTVCSRFAEDARVVR*LVGDRMAHLI 180
           A MGE LT RIR +MLSKI TFEVGWFDQD NSS  +CSR A+DA VVR LVGDRMA ++
Sbjct: 178 AYMGEYLTKRIRERMLSKILTFEVGWFDQDENSSGAICSRLAKDANVVRSLVGDRMALVV 237

Query: 181 QTFSAVSLACTLGLLIAWRCTVVIIAVQPLIILCFYLRQVL 303
           QT SAV +ACT+GL+IAWR  VV+IAVQPLII+CFY R+VL
Sbjct: 238 QTVSAVVIACTMGLVIAWRLAVVMIAVQPLIIICFYCRRVL 278


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