BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004767
         (678 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536302.1| PREDICTED: uncharacterized protein LOC100790...    59   7e-07
ref|XP_002270246.1| PREDICTED: uncharacterized protein LOC100263...    58   1e-06
gb|AFK36549.1| unknown [Lotus japonicus]                               58   2e-06

>ref|XP_003536302.1| PREDICTED: uncharacterized protein LOC100790892 [Glycine max]
          Length = 206

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 24/48 (50%), Positives = 36/48 (75%)
 Frame = +3

Query: 498 TMNPPLTMPGGTSTAVTNGLPSLVTQAVYQGNPTASGSGAFDSYNNNA 641
           ++ PP T+PG T+T  +NG PS+V+ A+YQ NP A  SG++D+YN +A
Sbjct: 152 SLAPPPTVPGSTATPASNGAPSMVSSAMYQANPPAPSSGSYDNYNTSA 199


>ref|XP_002270246.1| PREDICTED: uncharacterized protein LOC100263028 [Vitis vinifera]
           gi|363805533|sp|F6HQ26.1|RU1C_VITVI RecName: Full=U1
           small nuclear ribonucleoprotein C; Short=U1 snRNP C;
           Short=U1-C; Short=U1C
          Length = 213

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/48 (54%), Positives = 32/48 (66%)
 Frame = +3

Query: 498 TMNPPLTMPGGTSTAVTNGLPSLVTQAVYQGNPTASGSGAFDSYNNNA 641
           TMN P  +PG TST  + G PS++TQ +YQ NP    SG FDS+N NA
Sbjct: 159 TMNVPPAVPGSTSTPTSGGAPSMMTQPMYQANPAGPTSGGFDSFNINA 206


>gb|AFK36549.1| unknown [Lotus japonicus]
          Length = 192

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 24/45 (53%), Positives = 32/45 (71%)
 Frame = +3

Query: 507 PPLTMPGGTSTAVTNGLPSLVTQAVYQGNPTASGSGAFDSYNNNA 641
           PP T PG T+   +NG PS+V+ A+YQ NP+A  SG +D+YN NA
Sbjct: 141 PPTTAPGSTAAPASNGAPSMVSSAMYQPNPSAPSSGGYDNYNANA 185