BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004759
         (895 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26741.3| unnamed protein product [Vitis vinifera]              270   3e-70
ref|XP_002276224.1| PREDICTED: uncharacterized protein LOC100260...   270   3e-70
ref|XP_002298854.1| predicted protein [Populus trichocarpa] gi|2...   256   4e-66
ref|XP_002864399.1| mitochondrial transcription termination fact...   255   8e-66
ref|XP_002529053.1| conserved hypothetical protein [Ricinus comm...   253   3e-65

>emb|CBI26741.3| unnamed protein product [Vitis vinifera]
          Length = 480

 Score =  270 bits (690), Expect = 3e-70
 Identities = 163/329 (49%), Positives = 201/329 (61%), Gaps = 57/329 (17%)
 Frame = +3

Query: 78  MTFICLYSFQYPPLNTNNPIANDDPALL-----LLHGTRKCRRPCRS--FVVLSTHSNSK 236
           M    LY+F   P ++++P A+ +P  L     +     K R  CR+  F VLSTHSN +
Sbjct: 1   MAAFYLYTFNLIP-HSHSPSASSNPDSLSNLNSISAKIDKRRSSCRTSGFTVLSTHSNPR 59

Query: 237 LLKPNRKSRYGQPISPYXXXXXXXXXXXXXXXXXXXXXX--FGYPEKKTSKNQGNRHTKR 410
           +LK NR+SRYGQ +SPY                        F    KK +  +GN  T++
Sbjct: 60  ILKSNRRSRYGQVLSPYDTDDNAGDEDGDWFFDDEDSETEEFDADRKKFNSQKGN-DTRQ 118

Query: 411 G-----------------------KGPID--NGSR-----------------------GK 446
           G                       KG +D  NG                         GK
Sbjct: 119 GSRRQLEEDQSIRSLKSEGSFNISKGELDVKNGKNTIGSSYHTFNKSEDYDSSEMHGIGK 178

Query: 447 LKIGKPVESRFHQLSEELDLDEKWFPLIDYLSTFGLKDSHFVQIYERHMSSLQINVTSAQ 626
           LK  K  E+++ +LSEE+DLDEKWFPL+DYLSTFGLK+SHF+Q+YERHM SLQIN  SAQ
Sbjct: 179 LKPRKSTENKYCRLSEEIDLDEKWFPLLDYLSTFGLKESHFIQMYERHMPSLQINACSAQ 238

Query: 627 ERLEFLLSVGVKHRDIRKIILRQPQILEYTVESNLKSHVAFLVDLGVPHSRIGHIISAAP 806
           ERLE+L SVGVKHRDI++IILRQPQILEYTVE+NLKSHVAFLV LG+P SRIGH+I+AAP
Sbjct: 239 ERLEYLSSVGVKHRDIKRIILRQPQILEYTVENNLKSHVAFLVGLGIPDSRIGHVIAAAP 298

Query: 807 SLFSYSVEQSLKPTIRYLVEEVGIKTSDV 893
           SLFSYSVE SLKPT+RYL+EEVGIK +D+
Sbjct: 299 SLFSYSVENSLKPTVRYLIEEVGIKKNDL 327


>ref|XP_002276224.1| PREDICTED: uncharacterized protein LOC100260706 [Vitis vinifera]
          Length = 514

 Score =  270 bits (690), Expect = 3e-70
 Identities = 163/329 (49%), Positives = 201/329 (61%), Gaps = 57/329 (17%)
 Frame = +3

Query: 78  MTFICLYSFQYPPLNTNNPIANDDPALL-----LLHGTRKCRRPCRS--FVVLSTHSNSK 236
           M    LY+F   P ++++P A+ +P  L     +     K R  CR+  F VLSTHSN +
Sbjct: 1   MAAFYLYTFNLIP-HSHSPSASSNPDSLSNLNSISAKIDKRRSSCRTSGFTVLSTHSNPR 59

Query: 237 LLKPNRKSRYGQPISPYXXXXXXXXXXXXXXXXXXXXXX--FGYPEKKTSKNQGNRHTKR 410
           +LK NR+SRYGQ +SPY                        F    KK +  +GN  T++
Sbjct: 60  ILKSNRRSRYGQVLSPYDTDDNAGDEDGDWFFDDEDSETEEFDADRKKFNSQKGN-DTRQ 118

Query: 411 G-----------------------KGPID--NGSR-----------------------GK 446
           G                       KG +D  NG                         GK
Sbjct: 119 GSRRQLEEDQSIRSLKSEGSFNISKGELDVKNGKNTIGSSYHTFNKSEDYDSSEMHGIGK 178

Query: 447 LKIGKPVESRFHQLSEELDLDEKWFPLIDYLSTFGLKDSHFVQIYERHMSSLQINVTSAQ 626
           LK  K  E+++ +LSEE+DLDEKWFPL+DYLSTFGLK+SHF+Q+YERHM SLQIN  SAQ
Sbjct: 179 LKPRKSTENKYCRLSEEIDLDEKWFPLLDYLSTFGLKESHFIQMYERHMPSLQINACSAQ 238

Query: 627 ERLEFLLSVGVKHRDIRKIILRQPQILEYTVESNLKSHVAFLVDLGVPHSRIGHIISAAP 806
           ERLE+L SVGVKHRDI++IILRQPQILEYTVE+NLKSHVAFLV LG+P SRIGH+I+AAP
Sbjct: 239 ERLEYLSSVGVKHRDIKRIILRQPQILEYTVENNLKSHVAFLVGLGIPDSRIGHVIAAAP 298

Query: 807 SLFSYSVEQSLKPTIRYLVEEVGIKTSDV 893
           SLFSYSVE SLKPT+RYL+EEVGIK +D+
Sbjct: 299 SLFSYSVENSLKPTVRYLIEEVGIKKNDL 327


>ref|XP_002298854.1| predicted protein [Populus trichocarpa] gi|222846112|gb|EEE83659.1|
           predicted protein [Populus trichocarpa]
          Length = 448

 Score =  256 bits (655), Expect = 4e-66
 Identities = 140/257 (54%), Positives = 167/257 (64%), Gaps = 29/257 (11%)
 Frame = +3

Query: 210 VLSTHSNSKLLKPNRKSRYGQPISPYXXXXXXXXXXXXXXXXXXXXXXFG-----YPEKK 374
           VLSTHSN+K+L P RKSRYG   S Y                               +KK
Sbjct: 5   VLSTHSNAKILNPKRKSRYGHTFSLYDTDIGLDDWLLDDEFAEPVDFEVDGKKRVNSQKK 64

Query: 375 TSKNQGNRH--------TKRGKGPIDN----------------GSRGKLKIGKPVESRFH 482
           TS  +G +           R K  + N                  +GKL  GK  E R+ 
Sbjct: 65  TSTREGGQRLFNSRTSKNTREKSMVGNFYGTKTRTKEADSSDINGQGKLMTGKSTEDRYP 124

Query: 483 QLSEELDLDEKWFPLIDYLSTFGLKDSHFVQIYERHMSSLQINVTSAQERLEFLLSVGVK 662
           +LSEE+DLDEKW PL+DYLSTFGLK+SHF+QIYERHM SLQINV SA+ERLE+L S+GVK
Sbjct: 125 KLSEEIDLDEKWLPLLDYLSTFGLKESHFIQIYERHMPSLQINVCSARERLEYLQSIGVK 184

Query: 663 HRDIRKIILRQPQILEYTVESNLKSHVAFLVDLGVPHSRIGHIISAAPSLFSYSVEQSLK 842
           HRDI++I+LRQPQILEYTVESNLKSH AFL+ LG+P+SRIG II+AAPSLFSYSVE SLK
Sbjct: 185 HRDIKRILLRQPQILEYTVESNLKSHTAFLIGLGIPNSRIGQIIAAAPSLFSYSVENSLK 244

Query: 843 PTIRYLVEEVGIKTSDV 893
           PT+RY+VEEVGI   ++
Sbjct: 245 PTVRYMVEEVGIDEKNI 261


>ref|XP_002864399.1| mitochondrial transcription termination factor family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297310234|gb|EFH40658.1| mitochondrial transcription
           termination factor family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 493

 Score =  255 bits (652), Expect = 8e-66
 Identities = 139/271 (51%), Positives = 175/271 (64%), Gaps = 31/271 (11%)
 Frame = +3

Query: 174 TRKCRRPCRSFVVLSTHSNSKLLKPNRKSRYGQPISPYXXXXXXXXXXXXXXXXXXXXXX 353
           TR+  R  R FVV   HSN K++ P +KSRYGQ +SPY                      
Sbjct: 36  TRRRSRKTRGFVVTYAHSNPKIINPKKKSRYGQTLSPYDSDEDEELDDDEDDDWLLNDDF 95

Query: 354 FGYPE--KKTSKNQGNRHTKRG--KGPIDN---------------------------GSR 440
               E  KK  K+Q     K+G  KG + N                             R
Sbjct: 96  AEVTEYEKKKPKSQKQTMAKKGVKKGIVKNWEKPEESETDEDDLDIGISRNRESWRLDGR 155

Query: 441 GKLKIGKPVESRFHQLSEELDLDEKWFPLIDYLSTFGLKDSHFVQIYERHMSSLQINVTS 620
           GK+   K VE  + +LSEE+D+D KW PL+DYLSTFGLK+SHFVQ+YERHM SLQINV S
Sbjct: 156 GKVSSRKYVEKLYPRLSEEIDIDPKWVPLLDYLSTFGLKESHFVQMYERHMPSLQINVLS 215

Query: 621 AQERLEFLLSVGVKHRDIRKIILRQPQILEYTVESNLKSHVAFLVDLGVPHSRIGHIISA 800
           AQERL++LLSVGVKHRDI++++LRQPQIL+YTVE+NLK+H++FL+ LG+P+S+IG I++A
Sbjct: 216 AQERLDYLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAA 275

Query: 801 APSLFSYSVEQSLKPTIRYLVEEVGIKTSDV 893
            PSLFSYSVE SL+PTIRYL+EEVGIK +DV
Sbjct: 276 TPSLFSYSVENSLRPTIRYLIEEVGIKETDV 306


>ref|XP_002529053.1| conserved hypothetical protein [Ricinus communis]
           gi|223531533|gb|EEF33364.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 508

 Score =  253 bits (647), Expect = 3e-65
 Identities = 152/329 (46%), Positives = 186/329 (56%), Gaps = 57/329 (17%)
 Frame = +3

Query: 78  MTFICLYSFQYPPLNTNNPIANDDPALLLLHGT----------------RKCRRPCRSFV 209
           M   C+Y F       NNP     P L L H                  R+  R     V
Sbjct: 1   MAVSCMYPF-------NNPTLPSQPHLFL-HSVSSESKMREFYYIEDRRRRRSRVSSKLV 52

Query: 210 VLSTHSNSKLLKPNRKSRYGQPISPYXXXXXXXXXXXXXXXXXXXXXXFGYPE------- 368
           VLSTHSN+K+LK NRKSR+GQ +SPY                      F   E       
Sbjct: 53  VLSTHSNAKILKSNRKSRFGQTLSPYASDDDEEEEEDDDDDNDSDKSWFSDDEFAEPVDF 112

Query: 369 ----------KKTSKNQGNR---------------------HTKRGKGPIDN---GSRGK 446
                     KK S+ QG R                     HTK      D+     + +
Sbjct: 113 KVNGKRFKLQKKISERQGGRRQLDAKIGRNTQEKRIIGNFYHTKNKTKQPDSMHVDRKER 172

Query: 447 LKIGKPVESRFHQLSEELDLDEKWFPLIDYLSTFGLKDSHFVQIYERHMSSLQINVTSAQ 626
           L   +P E+R+ +LSEE+DLD +W PL+DYL TFGLK+S F+Q+YERHM SLQINV+SAQ
Sbjct: 173 LMSKEPTENRYEKLSEEIDLDNRWLPLLDYLCTFGLKESDFIQMYERHMPSLQINVSSAQ 232

Query: 627 ERLEFLLSVGVKHRDIRKIILRQPQILEYTVESNLKSHVAFLVDLGVPHSRIGHIISAAP 806
           ERLE+LLSVGVKHRDIR+I+LRQPQILEYTV++NLKSHVAFL  LG+P+SRIG II+  P
Sbjct: 233 ERLEYLLSVGVKHRDIRRILLRQPQILEYTVDNNLKSHVAFLSSLGIPNSRIGQIIAVTP 292

Query: 807 SLFSYSVEQSLKPTIRYLVEEVGIKTSDV 893
           SLFSYSV+ SLKPT+RYLVEE+GI   ++
Sbjct: 293 SLFSYSVQNSLKPTVRYLVEELGINEKNI 321