BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004694
         (2195 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307783.1| predicted protein [Populus trichocarpa] gi|2...   148   7e-33
ref|XP_002510662.1| ribosome biogenesis protein tsr1, putative [...   140   1e-30
gb|ACN29070.1| unknown [Zea mays] gi|413942217|gb|AFW74866.1| hy...   138   5e-30
ref|NP_001136680.1| uncharacterized protein LOC100216810 [Zea ma...   138   5e-30
ref|XP_002441596.1| hypothetical protein SORBIDRAFT_09g030040 [S...   138   7e-30

>ref|XP_002307783.1| predicted protein [Populus trichocarpa] gi|222857232|gb|EEE94779.1|
            predicted protein [Populus trichocarpa]
          Length = 798

 Score =  148 bits (373), Expect = 7e-33
 Identities = 69/95 (72%), Positives = 86/95 (90%)
 Frame = +2

Query: 1910 MNTSIKKHDSYNAPIKAKEDLIFHVGFCQFVTRPIFSSDAISSDKHKMERFLHAGRFSIA 2089
            ++ SIKKHD+Y+APIKAKE+L+FHVGF QFV RP+FS+D ++SDKHKMERFLHAGRFS+A
Sbjct: 603  LHFSIKKHDTYDAPIKAKEELVFHVGFRQFVARPVFSTDDMNSDKHKMERFLHAGRFSVA 662

Query: 2090 SVFAPISFPPLPIIVLKNGDGEVTPAAVAAVGSLR 2194
            S++APISFPPLP+IVLK+ +G   P A+AAVGSLR
Sbjct: 663  SIYAPISFPPLPLIVLKSAEGSAAP-AIAAVGSLR 696


>ref|XP_002510662.1| ribosome biogenesis protein tsr1, putative [Ricinus communis]
            gi|223551363|gb|EEF52849.1| ribosome biogenesis protein
            tsr1, putative [Ricinus communis]
          Length = 792

 Score =  140 bits (354), Expect = 1e-30
 Identities = 67/95 (70%), Positives = 84/95 (88%)
 Frame = +2

Query: 1910 MNTSIKKHDSYNAPIKAKEDLIFHVGFCQFVTRPIFSSDAISSDKHKMERFLHAGRFSIA 2089
            ++ SIKKHD+Y+APIK+KE+LIFHVGF QFV RPIFS+D I+SDKHKMERFLHAG+FS+A
Sbjct: 597  LHFSIKKHDTYDAPIKSKEELIFHVGFRQFVARPIFSTDNINSDKHKMERFLHAGQFSVA 656

Query: 2090 SVFAPISFPPLPIIVLKNGDGEVTPAAVAAVGSLR 2194
            S++APISFP LP++VLK+ +G   P  +AAVGSLR
Sbjct: 657  SIYAPISFPSLPLVVLKHAEGGAAP-TLAAVGSLR 690


>gb|ACN29070.1| unknown [Zea mays] gi|413942217|gb|AFW74866.1| hypothetical protein
            ZEAMMB73_498933 [Zea mays]
          Length = 785

 Score =  138 bits (348), Expect = 5e-30
 Identities = 69/95 (72%), Positives = 81/95 (85%)
 Frame = +2

Query: 1910 MNTSIKKHDSYNAPIKAKEDLIFHVGFCQFVTRPIFSSDAISSDKHKMERFLHAGRFSIA 2089
            ++ SIKKHDSY APIK+KE LIF+VGF QF  RP+FSSD I+ +KHKMERFLH GRFS+A
Sbjct: 594  LHFSIKKHDSYEAPIKSKEPLIFNVGFRQFTARPLFSSDNINCNKHKMERFLHHGRFSVA 653

Query: 2090 SVFAPISFPPLPIIVLKNGDGEVTPAAVAAVGSLR 2194
            SV+APISFPPLP+IVLKN DGE    A+AAVGSL+
Sbjct: 654  SVYAPISFPPLPLIVLKNRDGE--QPAIAAVGSLK 686


>ref|NP_001136680.1| uncharacterized protein LOC100216810 [Zea mays]
            gi|194696612|gb|ACF82390.1| unknown [Zea mays]
          Length = 195

 Score =  138 bits (348), Expect = 5e-30
 Identities = 69/95 (72%), Positives = 81/95 (85%)
 Frame = +2

Query: 1910 MNTSIKKHDSYNAPIKAKEDLIFHVGFCQFVTRPIFSSDAISSDKHKMERFLHAGRFSIA 2089
            ++ SIKKHDSY APIK+KE LIF+VGF QF  RP+FSSD I+ +KHKMERFLH GRFS+A
Sbjct: 4    LHFSIKKHDSYEAPIKSKEPLIFNVGFRQFTARPLFSSDNINCNKHKMERFLHHGRFSVA 63

Query: 2090 SVFAPISFPPLPIIVLKNGDGEVTPAAVAAVGSLR 2194
            SV+APISFPPLP+IVLKN DGE    A+AAVGSL+
Sbjct: 64   SVYAPISFPPLPLIVLKNRDGE--QPAIAAVGSLK 96


>ref|XP_002441596.1| hypothetical protein SORBIDRAFT_09g030040 [Sorghum bicolor]
            gi|241946881|gb|EES20026.1| hypothetical protein
            SORBIDRAFT_09g030040 [Sorghum bicolor]
          Length = 785

 Score =  138 bits (347), Expect = 7e-30
 Identities = 68/95 (71%), Positives = 81/95 (85%)
 Frame = +2

Query: 1910 MNTSIKKHDSYNAPIKAKEDLIFHVGFCQFVTRPIFSSDAISSDKHKMERFLHAGRFSIA 2089
            ++ SIKKHDSY APIK+KE LIF+VGF QF  RP+FSSD I+ +KHKMERFLH GRFS+A
Sbjct: 594  LHFSIKKHDSYEAPIKSKEPLIFNVGFRQFTARPLFSSDNINCNKHKMERFLHHGRFSVA 653

Query: 2090 SVFAPISFPPLPIIVLKNGDGEVTPAAVAAVGSLR 2194
            SV+APISFPPLP+IVLKN DGE    A+AA+GSL+
Sbjct: 654  SVYAPISFPPLPLIVLKNRDGE--QPAIAAIGSLK 686