BLASTX nr result

ID: Coptis24_contig00004554 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004554
         (1728 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275941.2| PREDICTED: uncharacterized protein LOC100252...   622   e-176
ref|XP_002275823.2| PREDICTED: ATP-dependent zinc metalloproteas...   614   e-173
ref|XP_002281222.1| PREDICTED: uncharacterized protein LOC100257...   608   e-171
ref|XP_002275965.1| PREDICTED: ATP-dependent zinc metalloproteas...   604   e-170
ref|XP_002517441.1| ATP binding protein, putative [Ricinus commu...   602   e-170

>ref|XP_002275941.2| PREDICTED: uncharacterized protein LOC100252565 [Vitis vinifera]
          Length = 520

 Score =  622 bits (1604), Expect = e-176
 Identities = 301/472 (63%), Positives = 369/472 (78%), Gaps = 1/472 (0%)
 Frame = +1

Query: 10   EMWSTGVGSSIATVMFLLAIFQQYLPYQLRGYVEKYAQRLFGFFNPYVQIKIHEYTGERF 189
            EMW+   GS +A  MFL  +FQQY P+Q R Y+EKY+Q+L  F  PY+QI   E++ +RF
Sbjct: 6    EMWAKP-GSLVAGAMFLWVMFQQYTPHQFRSYIEKYSQKLVSFVYPYIQITFQEFSEDRF 64

Query: 190  EQSEAYAAIQTYLSTNSSKQGKRLKADIAKNSKNLSLSMDDNEEVNDEYKGAQFWWASHK 369
            ++SEAY AI+ YLS N+S + KRLKAD+ K+S++L LSMDD EEV DE+KG + WWASHK
Sbjct: 65   KRSEAYVAIENYLSVNASTRAKRLKADVIKDSQSLVLSMDDREEVTDEFKGVKLWWASHK 124

Query: 370  TMSDKQTLSFYPTDADDNRYYMLTFHKKHRGLVTDSYMNHVLEEGKAIGVKNRLRKLYTN 549
                 QT SFYP  AD+ R+Y LTFHK HR +   SY+NHV++EGKAI V+NR RKLYTN
Sbjct: 125  NPPKTQTFSFYPA-ADEKRFYKLTFHKNHREMFVGSYLNHVMKEGKAIEVRNRQRKLYTN 183

Query: 550  NHSDNWYGYNKSVWSHVLFRHPSTFRTLAMDAEKKKEIIADLTSFRKGKDYYEKIGKAWK 729
            N SD W+GY +++WSHV F HP+ F TLAM+ +KK+EI+ DLT F + K+YY KIGKAWK
Sbjct: 184  NPSDKWHGYRRTLWSHVAFEHPARFETLAMEPKKKEEIVNDLTIFSRRKEYYSKIGKAWK 243

Query: 730  RGYLLYGPPGTGKSTMIAAIANFLDYDIYDLELTTVKNNTDLRKLLIETSNKSVIVIEDI 909
            RGYLLYGPPGTGKSTMIAA+AN LDYDIYDLELT+VK+NT+LR LLIET NKS+IVIEDI
Sbjct: 244  RGYLLYGPPGTGKSTMIAAMANLLDYDIYDLELTSVKSNTELRMLLIETRNKSIIVIEDI 303

Query: 910  DCSLDLTGQRXXXXXXXXXXXXXXXXXXXGNSDG-DSKVTLSGLLNFIDGLWSACGEERI 1086
            DCSLDLTGQR                      +  +SKVTLSGLLN IDGLWS CGEER+
Sbjct: 304  DCSLDLTGQRKKKKETNEEEKKDPIRKMEKEGESKESKVTLSGLLNVIDGLWSTCGEERL 363

Query: 1087 IIFTTNYKDKLDPALVRRGRMDKHIEMSYCSFGAFKVLAKNYLDLDSHHLFETVEQMLEK 1266
            IIFTTNY +KLDPAL+RRGRMDKHIE+SYC F AFKVLAKNYLDLDSHHLF ++ ++LE+
Sbjct: 364  IIFTTNYVEKLDPALIRRGRMDKHIELSYCCFEAFKVLAKNYLDLDSHHLFASIRRLLEE 423

Query: 1267 TQITPADVAENLMPKTINGNFADVCLENLVQALKDVQEEARLKAVEEAKERD 1422
            T +TPADVAENLMPK++ G+    CLE+L+QAL+  +EEAR+KA +EAKE++
Sbjct: 424  TNMTPADVAENLMPKSVTGDPGTTCLESLIQALETAKEEARVKAEKEAKEKE 475


>ref|XP_002275823.2| PREDICTED: ATP-dependent zinc metalloprotease FtsH-like [Vitis
            vinifera]
          Length = 528

 Score =  614 bits (1583), Expect = e-173
 Identities = 308/493 (62%), Positives = 379/493 (76%), Gaps = 8/493 (1%)
 Frame = +1

Query: 28   VGSSIATVMFLLAIFQQYLPYQLRGYVEKYAQRLFGFFNPYVQIKIHEYTGERF--EQSE 201
            +GS  A  MFL A+F+QY PYQLR Y+EKY+  L  F  PY+QI + E+T   F  ++SE
Sbjct: 10   LGSLAAGAMFLWAMFRQYFPYQLRPYIEKYSHNLVSFVYPYIQITVQEFTENSFRRKRSE 69

Query: 202  AYAAIQTYLSTNSSKQGKRLKADIAKNSKNLSLSMDDNEEVNDEYKGAQFWWASHKTMSD 381
            AYAAI+ YLS NSS + KRLKADI K+S+++ LSMDD+EEV DE+KG + WWAS+K    
Sbjct: 70   AYAAIENYLSANSSTRAKRLKADIVKDSQSVVLSMDDHEEVTDEFKGVKLWWASNKNPPP 129

Query: 382  KQTLSFYPTDADDNRYYMLTFHKKHRGLVTDSYMNHVLEEGKAIGVKNRLRKLYTNNHSD 561
             QT+SFYP  AD  RYY LTFHK++R L+  SY+NHV++EGKAI V+NR RKLYTNN S 
Sbjct: 130  MQTISFYPA-ADGKRYYKLTFHKQYRDLIVGSYLNHVIKEGKAIAVRNRQRKLYTNNPSQ 188

Query: 562  NWYGYNKSVWSHVLFRHPSTFRTLAMDAEKKKEIIADLTSFRKGKDYYEKIGKAWKRGYL 741
            NWYGY KSVWSHV F HP+TF TLAM+++KK+EI+ DLT FR  K+YY KIGKAWKRGYL
Sbjct: 189  NWYGYKKSVWSHVTFEHPATFETLAMESKKKEEIVNDLTIFRTRKEYYSKIGKAWKRGYL 248

Query: 742  LYGPPGTGKSTMIAAIANFLDYDIYDLELTTVKNNTDLRKLLIETSNKSVIVIEDIDCSL 921
            L+GPPGTGKS+MIAA+AN L+YDIYDLELT+VK+NT+LRKLLIET++KS++VIEDIDCSL
Sbjct: 249  LHGPPGTGKSSMIAAMANLLNYDIYDLELTSVKDNTELRKLLIETTSKSILVIEDIDCSL 308

Query: 922  DLTGQR----XXXXXXXXXXXXXXXXXXXGNSDGDSKVTLSGLLNFIDGLWSACGEERII 1089
            DLTGQR                            +SKVTLSGLLNFIDGLWSACGEER+I
Sbjct: 309  DLTGQRKKKKEKEEEDEESKDNPILKKGKEGESKESKVTLSGLLNFIDGLWSACGEERLI 368

Query: 1090 IFTTNYKDKLDPALVRRGRMDKHIEMSYCSFGAFKVLAKNYLDLDSHHLFETVEQMLEKT 1269
            +FTTN+ +KLDPAL+RRGRMDKHIE+SYC F AFKVLAKNYLDLDSHHLF ++ ++LE+T
Sbjct: 369  VFTTNHVEKLDPALIRRGRMDKHIELSYCCFEAFKVLAKNYLDLDSHHLFASIRRLLEET 428

Query: 1270 QITPADVAENLMPKTIN-GNFADVCLENLVQALKDVQEEARLKA-VEEAKERDSCTKDEL 1443
             +TPADVAENLMPK+I+  +    CLENL+QAL+  +EEAR+KA  EE +ER    K+  
Sbjct: 429  NMTPADVAENLMPKSISTDDPGTACLENLIQALETAKEEARVKAEKEEEEERLKAEKEGK 488

Query: 1444 NVDAALAEIVTKD 1482
              +A   E+  K+
Sbjct: 489  EKEATAGEVKEKE 501


>ref|XP_002281222.1| PREDICTED: uncharacterized protein LOC100257701 [Vitis vinifera]
          Length = 526

 Score =  608 bits (1568), Expect = e-171
 Identities = 305/493 (61%), Positives = 380/493 (77%), Gaps = 8/493 (1%)
 Frame = +1

Query: 28   VGSSIATVMFLLAIFQQYLPYQLRGYVEKYAQRLFGFFNPYVQIKIHEYTGERF--EQSE 201
            +GS  A  +FL A+FQQY PYQLR Y+EKY+Q+L  F  PY+QI   E+T   F  ++SE
Sbjct: 8    LGSVAAGAIFLWAMFQQYFPYQLRPYIEKYSQKLVSFVYPYIQITFQEFTENSFRRKRSE 67

Query: 202  AYAAIQTYLSTNSSKQGKRLKADIAKNSKNLSLSMDDNEEVNDEYKGAQFWWASHKTMSD 381
            AYAAI+ YLS NSS + KRLKADI K+S+++ LSMDD+EEV DE++G + WW S+K+   
Sbjct: 68   AYAAIENYLSANSSARAKRLKADIIKDSQSVVLSMDDHEEVTDEFQGVKLWWVSNKSPPK 127

Query: 382  KQTLSFYPTDADDNRYYMLTFHKKHRGLVTDSYMNHVLEEGKAIGVKNRLRKLYTNNHSD 561
             Q +SFYP  AD+ RYY LTFH+++R L+  SY+NHV++EGKAI V+NR RKL TNN SD
Sbjct: 128  MQAISFYPA-ADEKRYYRLTFHQQYRDLIVGSYLNHVIKEGKAIAVRNRQRKLCTNNPSD 186

Query: 562  NWYGYNKSVWSHVLFRHPSTFRTLAMDAEKKKEIIADLTSFRKGKDYYEKIGKAWKRGYL 741
            NW+GY KSVWSHV F HP+TF TLAM+++KK+EI+ DLT FR  KDYY KIGKAWKRGYL
Sbjct: 187  NWHGYKKSVWSHVAFEHPATFETLAMESKKKEEIVNDLTIFRTRKDYYSKIGKAWKRGYL 246

Query: 742  LYGPPGTGKSTMIAAIANFLDYDIYDLELTTVKNNTDLRKLLIETSNKSVIVIEDIDCSL 921
            L+GPPGTGKS+MIAA+AN L+YDIYDLELT+VK+NT+LRKLLIET++KS+IVIEDIDCSL
Sbjct: 247  LHGPPGTGKSSMIAAMANLLNYDIYDLELTSVKDNTELRKLLIETTSKSIIVIEDIDCSL 306

Query: 922  DLTGQR----XXXXXXXXXXXXXXXXXXXGNSDGDSKVTLSGLLNFIDGLWSACGEERII 1089
            DLTGQR                            +SKVTLSGLLNFIDGLWSACGEER+I
Sbjct: 307  DLTGQRKKKKEKEEEDEESKDNPIPKKGKEGESKESKVTLSGLLNFIDGLWSACGEERLI 366

Query: 1090 IFTTNYKDKLDPALVRRGRMDKHIEMSYCSFGAFKVLAKNYLDLDSHHLFETVEQMLEKT 1269
            +FTTN+ +KLDPAL+RRGRMD+HIE+SYC F AFKVLAKNYLDLDSHHLF ++ ++LE+T
Sbjct: 367  VFTTNHVEKLDPALIRRGRMDRHIELSYCCFEAFKVLAKNYLDLDSHHLFASIRRLLEET 426

Query: 1270 QITPADVAENLMPKTIN-GNFADVCLENLVQALKDVQEEARLKA-VEEAKERDSCTKDEL 1443
             +TPADVAENLMPK+I+  +    CLENL+QAL+  +EEAR+KA  EE +ER    K+  
Sbjct: 427  NMTPADVAENLMPKSISTDDPGTACLENLIQALETAKEEARVKAEKEEEEERLKAEKEGK 486

Query: 1444 NVDAALAEIVTKD 1482
              +A   E+  K+
Sbjct: 487  EKEATAGEVKEKE 499


>ref|XP_002275965.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH-like [Vitis
            vinifera]
          Length = 521

 Score =  604 bits (1557), Expect = e-170
 Identities = 298/497 (59%), Positives = 370/497 (74%), Gaps = 6/497 (1%)
 Frame = +1

Query: 10   EMWSTGVGSSIATVMFLLAIFQQYLPYQLRGYVEKYAQRLFGFFNPYVQIKIHEYTGERF 189
            EMW+   GS +A  MFL  +FQQ +P+Q R Y+EKY+Q+L  F  PY+QI   EY+  R+
Sbjct: 7    EMWAKP-GSLVAGAMFLWVMFQQCMPHQFRSYIEKYSQKLVSFVYPYIQITFQEYSENRY 65

Query: 190  EQSEAYAAIQTYLSTNSSKQGKRLKADIAKNSKNLSLSMDDNEEVNDEYKGAQFWWASHK 369
             +SEAY AI+ YLS ++S + KRLKAD+ K+S++L LSMD+ EEV +E+KG + WWAS K
Sbjct: 66   RRSEAYVAIENYLSVDASTRAKRLKADVIKDSQSLVLSMDEREEVREEFKGVKLWWASDK 125

Query: 370  TMSDKQTLSFYPTDADDNRYYMLTFHKKHRGLVTDSYMNHVLEEGKAIGVKNRLRKLYTN 549
            T    QT SF P  AD+ RYY LTFHK HR ++  SY+NHV++EGKAI V+NR RKL+TN
Sbjct: 126  TPPKMQTFSFAPA-ADEKRYYKLTFHKNHREMIVGSYLNHVMKEGKAIEVRNRQRKLFTN 184

Query: 550  NHSDNWYGYNKSVWSHVLFRHPSTFRTLAMDAEKKKEIIADLTSFRKGKDYYEKIGKAWK 729
            N  D WYGY K+VWSHV F HP+ F TLAM+ +KK+EII DLT F + K+YY KIGKAWK
Sbjct: 185  NSRDTWYGYKKAVWSHVAFEHPARFETLAMEPKKKEEIINDLTIFSRRKEYYSKIGKAWK 244

Query: 730  RGYLLYGPPGTGKSTMIAAIANFLDYDIYDLELTTVKNNTDLRKLLIETSNKSVIVIEDI 909
            RGYLLYGPPGTGKSTMIAA+AN LDYD+YDLELT+VK+NT+LRKLLI+T +KS+IVIEDI
Sbjct: 245  RGYLLYGPPGTGKSTMIAAMANLLDYDLYDLELTSVKDNTELRKLLIDTRSKSIIVIEDI 304

Query: 910  DCSLDLTGQRXXXXXXXXXXXXXXXXXXXGNSDGDSKVTLSGLLNFIDGLWSACGEERII 1089
            DCSLDLTGQR                      + +SKVTLSGLLN IDGLWS CGEER+I
Sbjct: 305  DCSLDLTGQRKKKKEKEEDEESKDNSITKKGKEDESKVTLSGLLNVIDGLWSTCGEERLI 364

Query: 1090 IFTTNYKDKLDPALVRRGRMDKHIEMSYCSFGAFKVLAKNYLDLDSHHLFETVEQMLEKT 1269
            +FTTNY +KLDPAL+RRGRMDKHIE+SYC F AFKVLAKNYLDLDSHHLF ++ +++E+T
Sbjct: 365  VFTTNYVEKLDPALIRRGRMDKHIELSYCCFDAFKVLAKNYLDLDSHHLFASIRRLMEET 424

Query: 1270 QITPADVAENLMPKTINGNFADVCLENLVQALKDVQEEARLKAVEEAKERD------SCT 1431
             +TPADVAE LMPKTI  +    CLENL+ AL   + EAR+KA +EAKE++         
Sbjct: 425  NMTPADVAEYLMPKTITDD-PGTCLENLILALGTAKGEARVKAEKEAKEKEEEEKRVKAE 483

Query: 1432 KDELNVDAALAEIVTKD 1482
            K+    +A   E+  K+
Sbjct: 484  KEAKEKEATAGEVKEKE 500


>ref|XP_002517441.1| ATP binding protein, putative [Ricinus communis]
            gi|223543452|gb|EEF44983.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 523

 Score =  602 bits (1553), Expect = e-170
 Identities = 297/496 (59%), Positives = 374/496 (75%), Gaps = 19/496 (3%)
 Frame = +1

Query: 10   EMWSTGVGSSIATVMFLLAIFQQYLPYQLRGYVEKYAQRLFGFFNPYVQIKIHEYTGERF 189
            EMW T +GS+IA +MF  A+FQQY PYQ RGY+++Y ++L  +  PY+QI  HEYTGER 
Sbjct: 5    EMW-TNLGSAIAGIMFAWAMFQQYFPYQFRGYLDRYTRKLVAYVYPYLQITFHEYTGERL 63

Query: 190  EQSEAYAAIQTYLSTNSSKQGKRLKADIAKNSKNLSLSMDDNEEVNDEYKGAQFWWASHK 369
            ++SE YA IQ YLS  SS   KRLKAD+ K+ ++L LSMDD+EE+ DEY G + WWAS K
Sbjct: 64   KRSELYANIQNYLSATSSTTAKRLKADVVKDGQSLILSMDDHEEITDEYNGIKVWWASSK 123

Query: 370  TMSDKQTLSFYPTDADDNRYYMLTFHKKHRGLVTDSYMNHVLEEGKAIGVKNRLRKLYTN 549
            T    QT+S+YP +A++ RY+ LT H++HR ++T SY++HVL+EGK I ++NR RKLYTN
Sbjct: 124  TTPKSQTISWYP-EAEERRYFKLTVHRRHRDIITTSYIDHVLKEGKTISIRNRQRKLYTN 182

Query: 550  NHSDNWYGYNKSVWSHVLFRHPSTFRTLAMDAEKKKEIIADLTSFRKGKDYYEKIGKAWK 729
            N S NWYG+  S WSHV+F HP+TF TL M  +KK+EI  DL  F KGK+YY KIGKAWK
Sbjct: 183  NPSQNWYGWKASKWSHVVFEHPATFDTLGMATKKKQEIKNDLIKFSKGKEYYAKIGKAWK 242

Query: 730  RGYLLYGPPGTGKSTMIAAIANFLDYDIYDLELTTVKNNTDLRKLLIETSNKSVIVIEDI 909
            RGYLLYGPPGTGKSTMIAA+ANFL+YD+YDLELTTVK+N++LRKLLIET++KS+IVIEDI
Sbjct: 243  RGYLLYGPPGTGKSTMIAAMANFLNYDVYDLELTTVKDNSELRKLLIETTSKSIIVIEDI 302

Query: 910  DCSLDLTGQR-----------XXXXXXXXXXXXXXXXXXXGNSDGDSKVTLSGLLNFIDG 1056
            DCSLDLTGQR                                S+  SKVTLSGLLNFIDG
Sbjct: 303  DCSLDLTGQRKPKKEKDDDDDDNDDEKKKDPVSKKKKKDEDESNKGSKVTLSGLLNFIDG 362

Query: 1057 LWSACGEERIIIFTTNYKDKLDPALVRRGRMDKHIEMSYCSFGAFKVLAKNYLDLDSHHL 1236
            +WSACG ERII+FTTNY +KLDPAL+RRGRMDKHIEMSYC F AFKVLAKNYLD++SH L
Sbjct: 363  IWSACGGERIIVFTTNYVEKLDPALIRRGRMDKHIEMSYCCFEAFKVLAKNYLDVESHEL 422

Query: 1237 FETVEQMLEKTQITPADVAENLMPKTINGNFADVCLENLVQALKDVQ--------EEARL 1392
            +  + ++LE+T +TPADVAENLMPK+ +    D CL+NL+ AL++ +        EEA+L
Sbjct: 423  YGKISKLLEETNMTPADVAENLMPKS-DEEDEDTCLKNLIAALEETKEEEARKKAEEAKL 481

Query: 1393 KAVEEAKERDSCTKDE 1440
            KA +EAKE++  +K++
Sbjct: 482  KAEQEAKEKEKASKED 497


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