BLASTX nr result

ID: Coptis24_contig00004524 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004524
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAC53927.1| hypothetical protein [Nicotiana tabacum]               86   4e-15
ref|XP_003549088.1| PREDICTED: uncharacterized protein LOC100810...    85   7e-15
ref|XP_002268167.1| PREDICTED: low-temperature-induced 65 kDa pr...    84   2e-14
ref|XP_003557062.1| PREDICTED: uncharacterized protein LOC100796...    83   2e-14
gb|AAD51627.1| seed maturation protein PM39 [Glycine max]              82   6e-14

>dbj|BAC53927.1| hypothetical protein [Nicotiana tabacum]
          Length = 669

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 60/156 (38%), Positives = 71/156 (45%), Gaps = 6/156 (3%)
 Frame = -3

Query: 466 TDKGVASVKGYIAEKLKPGEEDKALSEVISGAFHKPKVVVDSDEKKAMGQGVSDAFHXXX 287
           TDKGV S+K Y+AEK KPGEEDKALSEVISG+  + K   +                   
Sbjct: 546 TDKGV-SMKEYLAEKFKPGEEDKALSEVISGSLSRQKEKTE------------------- 585

Query: 286 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXRENKPMGKVTESEKVADRLGSSESEK----- 122
                                         E+KPMGKVTESE+   RLG  E  K     
Sbjct: 586 ------------------------------ESKPMGKVTESEEEERRLGPIEDAKKEEDG 615

Query: 121 -GGHVSGNDSPGKGVVDKFKGAFTSWFGKGGETNPS 17
             G     +  G+GVVD+ K A T+W GKGGET  S
Sbjct: 616 ASGETQVGEGFGQGVVDRLKDAVTTWLGKGGETQTS 651


>ref|XP_003549088.1| PREDICTED: uncharacterized protein LOC100810490 [Glycine max]
          Length = 398

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 59/154 (38%), Positives = 76/154 (49%), Gaps = 2/154 (1%)
 Frame = -3

Query: 469 ETDKGVASVKGYIAEKLKPGEEDKALSEVISGAFHKPKVVVDSDEKKAMGQGVSDAFHXX 290
           E DKGV SVK Y+ +KL+PG+ED+ALSEVIS   HK ++      ++ + + VSDA H  
Sbjct: 237 EQDKGV-SVKDYLVDKLRPGDEDRALSEVISETLHKKELPPVEVTEEGVRKVVSDAVH-- 293

Query: 289 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRENKPMGKVTESEKVADRLG--SSESEKGG 116
                                            + +GKVTESE+V  RLG  S  +EK  
Sbjct: 294 --------------------KREDDPERRMEHQRILGKVTESEEVKRRLGGESVVTEKKN 333

Query: 115 HVSGNDSPGKGVVDKFKGAFTSWFGKGGETNPSQ 14
                +SPGKGVVDK KG   +WF    E   SQ
Sbjct: 334 QEMYVNSPGKGVVDKLKGVVGTWFTNPAENQSSQ 367


>ref|XP_002268167.1| PREDICTED: low-temperature-induced 65 kDa protein-like [Vitis
           vinifera]
          Length = 542

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 66/180 (36%), Positives = 82/180 (45%), Gaps = 20/180 (11%)
 Frame = -3

Query: 505 TGSQVDKGRGVGETDKG-----------VASVKGYIAEKLKPGEEDKALSEVISGAFHKP 359
           TGS+ +   G  E DKG           V S+K Y+AEKLKP +ED+ALSEVIS A  K 
Sbjct: 379 TGSERE---GPKEHDKGSEPEGCRAPDNVVSMKAYLAEKLKPSDEDRALSEVISDALQKR 435

Query: 358 KVVVDSDEKKAMGQGVSDAFHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRENKPMG 179
           K   + + K                                              +KPMG
Sbjct: 436 KQEPELETK----------------------------------------------SKPMG 449

Query: 178 KVTESEKVADRLG-----SSESEKGGHV----SGNDSPGKGVVDKFKGAFTSWFGKGGET 26
           KVTESE+VA RLG     S E+   G V    S N + G GVVDK +GA +SW GKGG++
Sbjct: 450 KVTESEEVARRLGTENKPSGEASDSGDVKFDSSSNVNSGSGVVDKLRGAVSSWLGKGGDS 509


>ref|XP_003557062.1| PREDICTED: uncharacterized protein LOC100796932 [Glycine max]
          Length = 199

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 59/154 (38%), Positives = 76/154 (49%), Gaps = 2/154 (1%)
 Frame = -3

Query: 469 ETDKGVASVKGYIAEKLKPGEEDKALSEVISGAFHKPKVVVDSDEKKAMGQGVSDAFHXX 290
           E DKGV SVK Y+ +KL+PG+ED+ALSEVIS   HK ++      ++ + + VSDA H  
Sbjct: 38  EQDKGV-SVKDYLVDKLRPGDEDRALSEVISETLHKKELPPVEVTEEGVRKVVSDAVH-- 94

Query: 289 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRENKPMGKVTESEKVADRLG--SSESEKGG 116
                                            + +GKVTESE+V  RLG  S  +EK  
Sbjct: 95  --------------------KRDDDPEGKMEHQRILGKVTESEEVKRRLGGESVVTEKKY 134

Query: 115 HVSGNDSPGKGVVDKFKGAFTSWFGKGGETNPSQ 14
                +SPGKGVVDK KG   +WF    E   SQ
Sbjct: 135 QEMYVNSPGKGVVDKLKGMVGTWFTNPAENQSSQ 168


>gb|AAD51627.1| seed maturation protein PM39 [Glycine max]
          Length = 441

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 62/165 (37%), Positives = 79/165 (47%), Gaps = 3/165 (1%)
 Frame = -3

Query: 499 SQVDKGRGVG-ETDKGVASVKGYIAEKLKPGEEDKALSEVISGAFHKPKVVVDSDEKKAM 323
           S  +K   VG E DKGV SVK Y+ +KL+PG+ED+ALS+VIS   HK +V      ++ +
Sbjct: 271 SGTEKISNVGVEQDKGV-SVKDYLVDKLRPGDEDRALSKVISETLHKKEVHPVEVTEEGV 329

Query: 322 GQGVSDAFHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRENKPMGKVTESEKVADRL 143
            + VSDA H                                   K +GKVTESE+V  RL
Sbjct: 330 RKMVSDAVH----------------------KREDEPERKVEHQKILGKVTESEEVKRRL 367

Query: 142 GSS--ESEKGGHVSGNDSPGKGVVDKFKGAFTSWFGKGGETNPSQ 14
           G    E+EK       +SPG GVVDK  G   +WF    E   SQ
Sbjct: 368 GGEDVETEKKYQEMYVNSPGTGVVDKLTGMVGTWFTNPAENQSSQ 412


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