BLASTX nr result

ID: Coptis24_contig00004501 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004501
         (1539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266734.2| PREDICTED: transaldolase-like [Vitis vinifer...   547   e-153
ref|XP_003631434.1| PREDICTED: transaldolase isoform 1 [Vitis vi...   543   e-152
ref|XP_003631436.1| PREDICTED: transaldolase isoform 3 [Vitis vi...   532   e-149
ref|XP_002329906.1| predicted protein [Populus trichocarpa] gi|2...   529   e-148
ref|XP_003631435.1| PREDICTED: transaldolase isoform 2 [Vitis vi...   529   e-148

>ref|XP_002266734.2| PREDICTED: transaldolase-like [Vitis vinifera]
            gi|298204833|emb|CBI25778.3| unnamed protein product
            [Vitis vinifera]
          Length = 396

 Score =  547 bits (1410), Expect = e-153
 Identities = 282/377 (74%), Positives = 308/377 (81%), Gaps = 1/377 (0%)
 Frame = -1

Query: 1404 FSTPSISPNLHFGFHKSFPLIRASIGNNXXXXXXXXXXXXXSELDAIASYSEIVPDTVIF 1225
            F   S +P     F +SFP IRAS   +              E DA++  SEIVPDTVIF
Sbjct: 25   FLARSATPRFALSFQRSFPQIRASANFSSSLDKGLST-----EFDAVSDLSEIVPDTVIF 79

Query: 1224 DDFERFPPTAATVSSALLLGICSLPDTIFRNAIDNALSATECYGLED-SSRFSCFYNKAL 1048
            DDFERFPPTAATVSS+LLLGICSLPDTIFR+A++ AL+ + CYGLE   +R SCF+NKAL
Sbjct: 80   DDFERFPPTAATVSSSLLLGICSLPDTIFRSAVETALADSVCYGLESPDARMSCFFNKAL 139

Query: 1047 VNVGVDLAKFVPGRVSTEVDARLAYDTHGIIRKVHELLRLYSEMDVPPERLLFKIPSTWQ 868
            V VG DL K VPGRVSTEVDARLAYDTHGIIRKVH+LL LY+E+DVPPERLLFKIPSTWQ
Sbjct: 140  VKVGSDLVKLVPGRVSTEVDARLAYDTHGIIRKVHDLLTLYNEIDVPPERLLFKIPSTWQ 199

Query: 867  GIEASRVLESEGIQTHMTFVYSFCXXXXXXXXXASVIQIFVGRLRDWARNHSGDAEIDAA 688
            GIEASR+LESEGIQTH+TFVYSFC         ASVIQIFVGR+RDWARNHSGD EI+AA
Sbjct: 200  GIEASRLLESEGIQTHLTFVYSFCQAAAAAQAGASVIQIFVGRVRDWARNHSGDPEIEAA 259

Query: 687  LERGEDPGLALVTKAYNYIHKCGSKSKLMAAAVRNKQDLFSLLGVDYIIAPLKVMQSLKE 508
            L+RGEDPGLALVTKAYNYIHK G KSKLMAAAVRNKQDLFSLLGVDYIIAPLKV++SLKE
Sbjct: 260  LKRGEDPGLALVTKAYNYIHKHGYKSKLMAAAVRNKQDLFSLLGVDYIIAPLKVLESLKE 319

Query: 507  TTAPANEKYSFVRRLSPNSAIGYKFIEEELVKWDQLTFASAMGPAAEELLATGLEGYINQ 328
            +    +EKYSFVRRLSPNSA  Y F EEELVKWDQL FAS+MGPAA ELLA GLEGY  Q
Sbjct: 320  SITSPDEKYSFVRRLSPNSAASYSFSEEELVKWDQLNFASSMGPAAVELLAAGLEGYATQ 379

Query: 327  TKRVEELFGKIWPPPNV 277
             KRVEELFGKIWPPPNV
Sbjct: 380  AKRVEELFGKIWPPPNV 396


>ref|XP_003631434.1| PREDICTED: transaldolase isoform 1 [Vitis vinifera]
            gi|297741155|emb|CBI31886.3| unnamed protein product
            [Vitis vinifera]
          Length = 396

 Score =  543 bits (1400), Expect = e-152
 Identities = 281/377 (74%), Positives = 307/377 (81%), Gaps = 1/377 (0%)
 Frame = -1

Query: 1404 FSTPSISPNLHFGFHKSFPLIRASIGNNXXXXXXXXXXXXXSELDAIASYSEIVPDTVIF 1225
            F   S +P     F +SFP IRAS   +              E DA++  SEIVPDTVIF
Sbjct: 25   FLARSAAPRFALSFQRSFPQIRASANFSSSLDKGLST-----EFDAVSDLSEIVPDTVIF 79

Query: 1224 DDFERFPPTAATVSSALLLGICSLPDTIFRNAIDNALSATECYGLED-SSRFSCFYNKAL 1048
            DDFERFPPTAATVSS+LLLGICSLPDTIFR+A++ AL+ + CYGLE   +R SCF+NKAL
Sbjct: 80   DDFERFPPTAATVSSSLLLGICSLPDTIFRSAVETALADSVCYGLESPDARMSCFFNKAL 139

Query: 1047 VNVGVDLAKFVPGRVSTEVDARLAYDTHGIIRKVHELLRLYSEMDVPPERLLFKIPSTWQ 868
            V VG DL K VPGRVSTEVDARLAYDTHGIIRKVH+LL LY+E+DVP ERLLFKIPSTWQ
Sbjct: 140  VKVGSDLVKLVPGRVSTEVDARLAYDTHGIIRKVHDLLTLYNEIDVPLERLLFKIPSTWQ 199

Query: 867  GIEASRVLESEGIQTHMTFVYSFCXXXXXXXXXASVIQIFVGRLRDWARNHSGDAEIDAA 688
            GIEASR+LESEGIQTH+TFVYSFC         ASVIQIFVGR+RDWARNHSGD EI+AA
Sbjct: 200  GIEASRLLESEGIQTHLTFVYSFCQAAAAAQAGASVIQIFVGRVRDWARNHSGDPEIEAA 259

Query: 687  LERGEDPGLALVTKAYNYIHKCGSKSKLMAAAVRNKQDLFSLLGVDYIIAPLKVMQSLKE 508
            L+RGEDPGLALVTKAYNYIHK G KSKLMAAAVRNKQDLFSLLGVDYIIAPLKV++SLKE
Sbjct: 260  LKRGEDPGLALVTKAYNYIHKHGYKSKLMAAAVRNKQDLFSLLGVDYIIAPLKVLESLKE 319

Query: 507  TTAPANEKYSFVRRLSPNSAIGYKFIEEELVKWDQLTFASAMGPAAEELLATGLEGYINQ 328
            +    +EKYSFVRRLSPNSA  Y F EEELVKWDQL FAS+MGPAA ELLA GLEGY  Q
Sbjct: 320  SITSPDEKYSFVRRLSPNSAASYSFSEEELVKWDQLNFASSMGPAAVELLAAGLEGYATQ 379

Query: 327  TKRVEELFGKIWPPPNV 277
             KRVEELFGKIWPPPNV
Sbjct: 380  AKRVEELFGKIWPPPNV 396


>ref|XP_003631436.1| PREDICTED: transaldolase isoform 3 [Vitis vinifera]
          Length = 414

 Score =  532 bits (1371), Expect = e-149
 Identities = 281/395 (71%), Positives = 307/395 (77%), Gaps = 19/395 (4%)
 Frame = -1

Query: 1404 FSTPSISPNLHFGFHKSFPLIRASIGNNXXXXXXXXXXXXXSELDAIASYSEIVPDTVIF 1225
            F   S +P     F +SFP IRAS   +              E DA++  SEIVPDTVIF
Sbjct: 25   FLARSAAPRFALSFQRSFPQIRASANFSSSLDKGLST-----EFDAVSDLSEIVPDTVIF 79

Query: 1224 DDFERFPPTAATVSSALLLGICSLPDTIFRNAIDNALSATECYGLED-SSRFSCFYNKAL 1048
            DDFERFPPTAATVSS+LLLGICSLPDTIFR+A++ AL+ + CYGLE   +R SCF+NKAL
Sbjct: 80   DDFERFPPTAATVSSSLLLGICSLPDTIFRSAVETALADSVCYGLESPDARMSCFFNKAL 139

Query: 1047 VNVGVDLAKFVPGRVSTEVDARLAYDTHGIIRK------------------VHELLRLYS 922
            V VG DL K VPGRVSTEVDARLAYDTHGIIRK                  VH+LL LY+
Sbjct: 140  VKVGSDLVKLVPGRVSTEVDARLAYDTHGIIRKFPKFGSLLVMNYPKNFGLVHDLLTLYN 199

Query: 921  EMDVPPERLLFKIPSTWQGIEASRVLESEGIQTHMTFVYSFCXXXXXXXXXASVIQIFVG 742
            E+DVP ERLLFKIPSTWQGIEASR+LESEGIQTH+TFVYSFC         ASVIQIFVG
Sbjct: 200  EIDVPLERLLFKIPSTWQGIEASRLLESEGIQTHLTFVYSFCQAAAAAQAGASVIQIFVG 259

Query: 741  RLRDWARNHSGDAEIDAALERGEDPGLALVTKAYNYIHKCGSKSKLMAAAVRNKQDLFSL 562
            R+RDWARNHSGD EI+AAL+RGEDPGLALVTKAYNYIHK G KSKLMAAAVRNKQDLFSL
Sbjct: 260  RVRDWARNHSGDPEIEAALKRGEDPGLALVTKAYNYIHKHGYKSKLMAAAVRNKQDLFSL 319

Query: 561  LGVDYIIAPLKVMQSLKETTAPANEKYSFVRRLSPNSAIGYKFIEEELVKWDQLTFASAM 382
            LGVDYIIAPLKV++SLKE+    +EKYSFVRRLSPNSA  Y F EEELVKWDQL FAS+M
Sbjct: 320  LGVDYIIAPLKVLESLKESITSPDEKYSFVRRLSPNSAASYSFSEEELVKWDQLNFASSM 379

Query: 381  GPAAEELLATGLEGYINQTKRVEELFGKIWPPPNV 277
            GPAA ELLA GLEGY  Q KRVEELFGKIWPPPNV
Sbjct: 380  GPAAVELLAAGLEGYATQAKRVEELFGKIWPPPNV 414


>ref|XP_002329906.1| predicted protein [Populus trichocarpa] gi|222871143|gb|EEF08274.1|
            predicted protein [Populus trichocarpa]
          Length = 399

 Score =  529 bits (1363), Expect = e-148
 Identities = 275/369 (74%), Positives = 305/369 (82%), Gaps = 2/369 (0%)
 Frame = -1

Query: 1377 LHFGFHK-SFPLIRASIGNNXXXXXXXXXXXXXSELDAIASYSEIVPDTVIFDDFERFPP 1201
            + F  H  SFP IRAS                 +ELDA++S SEIVPDTV+FDDF++FPP
Sbjct: 41   IFFKLHNPSFPQIRAS----------SLDAGASTELDAVSSLSEIVPDTVVFDDFQKFPP 90

Query: 1200 TAATVSSALLLGICSLPDTIFRNAIDNALSATECYGLE-DSSRFSCFYNKALVNVGVDLA 1024
            TAATVSS+LLLGICSLPDTIFR+A+D AL+ + C  LE D  R SCF NKALVNVG DL+
Sbjct: 91   TAATVSSSLLLGICSLPDTIFRSAVDTALADSGCSSLENDVLRLSCFANKALVNVGGDLS 150

Query: 1023 KFVPGRVSTEVDARLAYDTHGIIRKVHELLRLYSEMDVPPERLLFKIPSTWQGIEASRVL 844
            K VPGRVSTEVDARLAYDTHGIIRKVH+LL+ Y E+DVPPERLLFKIP+TWQGIEASR+L
Sbjct: 151  KLVPGRVSTEVDARLAYDTHGIIRKVHDLLKSYGEIDVPPERLLFKIPATWQGIEASRLL 210

Query: 843  ESEGIQTHMTFVYSFCXXXXXXXXXASVIQIFVGRLRDWARNHSGDAEIDAALERGEDPG 664
            ESEGIQTH+TFVYSF          ASVIQIFVGRLRDW+RNHSGD EI+AAL+RGEDPG
Sbjct: 211  ESEGIQTHLTFVYSFVQAAAAAQAGASVIQIFVGRLRDWSRNHSGDPEIEAALKRGEDPG 270

Query: 663  LALVTKAYNYIHKCGSKSKLMAAAVRNKQDLFSLLGVDYIIAPLKVMQSLKETTAPANEK 484
            LALVTKAYNYIHK G KSKLMAAAVRNKQDLFSLLGVDYIIAPLKVMQSLKE+    +EK
Sbjct: 271  LALVTKAYNYIHKYGYKSKLMAAAVRNKQDLFSLLGVDYIIAPLKVMQSLKESLTTPDEK 330

Query: 483  YSFVRRLSPNSAIGYKFIEEELVKWDQLTFASAMGPAAEELLATGLEGYINQTKRVEELF 304
            YSFVRRLSP+SA  Y F EEEL+KWDQL+ ASAMGPA+ ELLA GL+GY+NQ KRVEELF
Sbjct: 331  YSFVRRLSPHSAAAYSFSEEELIKWDQLSLASAMGPASVELLAAGLDGYVNQAKRVEELF 390

Query: 303  GKIWPPPNV 277
             KIWPPPNV
Sbjct: 391  AKIWPPPNV 399


>ref|XP_003631435.1| PREDICTED: transaldolase isoform 2 [Vitis vinifera]
          Length = 423

 Score =  529 bits (1362), Expect = e-148
 Identities = 281/404 (69%), Positives = 307/404 (75%), Gaps = 28/404 (6%)
 Frame = -1

Query: 1404 FSTPSISPNLHFGFHKSFPLIRASIGNNXXXXXXXXXXXXXSELDAIASYSEIVPDTVIF 1225
            F   S +P     F +SFP IRAS   +              E DA++  SEIVPDTVIF
Sbjct: 25   FLARSAAPRFALSFQRSFPQIRASANFSSSLDKGLST-----EFDAVSDLSEIVPDTVIF 79

Query: 1224 DDFER---------------------------FPPTAATVSSALLLGICSLPDTIFRNAI 1126
            DDFER                           FPPTAATVSS+LLLGICSLPDTIFR+A+
Sbjct: 80   DDFERLHTLSLSLFFIYKKINSSRILNYLKFRFPPTAATVSSSLLLGICSLPDTIFRSAV 139

Query: 1125 DNALSATECYGLED-SSRFSCFYNKALVNVGVDLAKFVPGRVSTEVDARLAYDTHGIIRK 949
            + AL+ + CYGLE   +R SCF+NKALV VG DL K VPGRVSTEVDARLAYDTHGIIRK
Sbjct: 140  ETALADSVCYGLESPDARMSCFFNKALVKVGSDLVKLVPGRVSTEVDARLAYDTHGIIRK 199

Query: 948  VHELLRLYSEMDVPPERLLFKIPSTWQGIEASRVLESEGIQTHMTFVYSFCXXXXXXXXX 769
            VH+LL LY+E+DVP ERLLFKIPSTWQGIEASR+LESEGIQTH+TFVYSFC         
Sbjct: 200  VHDLLTLYNEIDVPLERLLFKIPSTWQGIEASRLLESEGIQTHLTFVYSFCQAAAAAQAG 259

Query: 768  ASVIQIFVGRLRDWARNHSGDAEIDAALERGEDPGLALVTKAYNYIHKCGSKSKLMAAAV 589
            ASVIQIFVGR+RDWARNHSGD EI+AAL+RGEDPGLALVTKAYNYIHK G KSKLMAAAV
Sbjct: 260  ASVIQIFVGRVRDWARNHSGDPEIEAALKRGEDPGLALVTKAYNYIHKHGYKSKLMAAAV 319

Query: 588  RNKQDLFSLLGVDYIIAPLKVMQSLKETTAPANEKYSFVRRLSPNSAIGYKFIEEELVKW 409
            RNKQDLFSLLGVDYIIAPLKV++SLKE+    +EKYSFVRRLSPNSA  Y F EEELVKW
Sbjct: 320  RNKQDLFSLLGVDYIIAPLKVLESLKESITSPDEKYSFVRRLSPNSAASYSFSEEELVKW 379

Query: 408  DQLTFASAMGPAAEELLATGLEGYINQTKRVEELFGKIWPPPNV 277
            DQL FAS+MGPAA ELLA GLEGY  Q KRVEELFGKIWPPPNV
Sbjct: 380  DQLNFASSMGPAAVELLAAGLEGYATQAKRVEELFGKIWPPPNV 423


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