BLASTX nr result
ID: Coptis24_contig00004335
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00004335 (480 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003543681.1| PREDICTED: uncharacterized protein LOC100786... 145 4e-33 gb|ACU21364.1| unknown [Glycine max] 145 4e-33 ref|XP_002517633.1| Nucleosome-binding protein, putative [Ricinu... 143 1e-32 ref|NP_001240074.1| uncharacterized protein LOC100776785 [Glycin... 142 2e-32 emb|CBI28258.3| unnamed protein product [Vitis vinifera] 140 8e-32 >ref|XP_003543681.1| PREDICTED: uncharacterized protein LOC100786540 [Glycine max] Length = 276 Score = 145 bits (365), Expect = 4e-33 Identities = 66/94 (70%), Positives = 83/94 (88%) Frame = +3 Query: 111 KDIEIKKPQDDEIISVELPAPLGWTKKFFPKQGGTPKKNEIIFIAPTGEEFNNRKQLEQF 290 ++ E ++ Q++E++SVELPAP GW K FFPK+ GTP+K+EI+FIAPTGEE N +KQLEQ+ Sbjct: 2 ENAEEQQQQNEEVLSVELPAPSGWNKLFFPKKVGTPRKSEIVFIAPTGEEINTKKQLEQY 61 Query: 291 LKSHPGSIPISEFDWGTGETPRRSARISEKVKAT 392 LK+HPG+ ISEFDWGTGETPRRSARISEKVK+T Sbjct: 62 LKAHPGNPVISEFDWGTGETPRRSARISEKVKST 95 >gb|ACU21364.1| unknown [Glycine max] Length = 276 Score = 145 bits (365), Expect = 4e-33 Identities = 66/94 (70%), Positives = 83/94 (88%) Frame = +3 Query: 111 KDIEIKKPQDDEIISVELPAPLGWTKKFFPKQGGTPKKNEIIFIAPTGEEFNNRKQLEQF 290 ++ E ++ Q++E++SVELPAP GW K FFPK+ GTP+K+EI+FIAPTGEE N +KQLEQ+ Sbjct: 2 ENAEEQQQQNEEVLSVELPAPSGWNKLFFPKKVGTPRKSEIVFIAPTGEEINTKKQLEQY 61 Query: 291 LKSHPGSIPISEFDWGTGETPRRSARISEKVKAT 392 LK+HPG+ ISEFDWGTGETPRRSARISEKVK+T Sbjct: 62 LKAHPGNPVISEFDWGTGETPRRSARISEKVKST 95 >ref|XP_002517633.1| Nucleosome-binding protein, putative [Ricinus communis] gi|223543265|gb|EEF44797.1| Nucleosome-binding protein, putative [Ricinus communis] Length = 331 Score = 143 bits (361), Expect = 1e-32 Identities = 64/84 (76%), Positives = 77/84 (91%) Frame = +3 Query: 141 DEIISVELPAPLGWTKKFFPKQGGTPKKNEIIFIAPTGEEFNNRKQLEQFLKSHPGSIPI 320 +E++SVELPAP W K +FPK+ GTP+K+EI+FI+PTGEE N+RKQLEQ+LKSHPG+ PI Sbjct: 5 EEVVSVELPAPSSWKKMYFPKRAGTPRKSEIMFISPTGEEINSRKQLEQYLKSHPGNPPI 64 Query: 321 SEFDWGTGETPRRSARISEKVKAT 392 +EFDWGTGETPRRSARISEKVKAT Sbjct: 65 AEFDWGTGETPRRSARISEKVKAT 88 >ref|NP_001240074.1| uncharacterized protein LOC100776785 [Glycine max] gi|255645971|gb|ACU23474.1| unknown [Glycine max] Length = 275 Score = 142 bits (359), Expect = 2e-32 Identities = 65/86 (75%), Positives = 78/86 (90%) Frame = +3 Query: 135 QDDEIISVELPAPLGWTKKFFPKQGGTPKKNEIIFIAPTGEEFNNRKQLEQFLKSHPGSI 314 Q+DE++SVELPAP GW K FFPK+ GTP+K+EI+FIAPTGEE + +KQLEQ+LK+HPG+ Sbjct: 10 QNDEVLSVELPAPSGWNKLFFPKKLGTPRKSEIVFIAPTGEEISTKKQLEQYLKAHPGNP 69 Query: 315 PISEFDWGTGETPRRSARISEKVKAT 392 ISEFDWGTGETPRRSARISEKVK+T Sbjct: 70 VISEFDWGTGETPRRSARISEKVKST 95 >emb|CBI28258.3| unnamed protein product [Vitis vinifera] Length = 315 Score = 140 bits (354), Expect = 8e-32 Identities = 65/102 (63%), Positives = 83/102 (81%) Frame = +3 Query: 87 MATSSAEKKDIEIKKPQDDEIISVELPAPLGWTKKFFPKQGGTPKKNEIIFIAPTGEEFN 266 MAT+ A+K D ++ D+++S++LPAP GWTKKF PK+GGTP++NEIIF++PTGEE Sbjct: 1 MATAQADK-DFMKEQHSPDDVVSIDLPAPQGWTKKFTPKKGGTPRRNEIIFVSPTGEEIK 59 Query: 267 NRKQLEQFLKSHPGSIPISEFDWGTGETPRRSARISEKVKAT 392 NR QL++FLKSHPG SEFDWGTG++PRRSARIS K KAT Sbjct: 60 NRSQLDRFLKSHPGGPSCSEFDWGTGDSPRRSARISGKSKAT 101