BLASTX nr result

ID: Coptis24_contig00004335 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004335
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543681.1| PREDICTED: uncharacterized protein LOC100786...   145   4e-33
gb|ACU21364.1| unknown [Glycine max]                                  145   4e-33
ref|XP_002517633.1| Nucleosome-binding protein, putative [Ricinu...   143   1e-32
ref|NP_001240074.1| uncharacterized protein LOC100776785 [Glycin...   142   2e-32
emb|CBI28258.3| unnamed protein product [Vitis vinifera]              140   8e-32

>ref|XP_003543681.1| PREDICTED: uncharacterized protein LOC100786540 [Glycine max]
          Length = 276

 Score =  145 bits (365), Expect = 4e-33
 Identities = 66/94 (70%), Positives = 83/94 (88%)
 Frame = +3

Query: 111 KDIEIKKPQDDEIISVELPAPLGWTKKFFPKQGGTPKKNEIIFIAPTGEEFNNRKQLEQF 290
           ++ E ++ Q++E++SVELPAP GW K FFPK+ GTP+K+EI+FIAPTGEE N +KQLEQ+
Sbjct: 2   ENAEEQQQQNEEVLSVELPAPSGWNKLFFPKKVGTPRKSEIVFIAPTGEEINTKKQLEQY 61

Query: 291 LKSHPGSIPISEFDWGTGETPRRSARISEKVKAT 392
           LK+HPG+  ISEFDWGTGETPRRSARISEKVK+T
Sbjct: 62  LKAHPGNPVISEFDWGTGETPRRSARISEKVKST 95


>gb|ACU21364.1| unknown [Glycine max]
          Length = 276

 Score =  145 bits (365), Expect = 4e-33
 Identities = 66/94 (70%), Positives = 83/94 (88%)
 Frame = +3

Query: 111 KDIEIKKPQDDEIISVELPAPLGWTKKFFPKQGGTPKKNEIIFIAPTGEEFNNRKQLEQF 290
           ++ E ++ Q++E++SVELPAP GW K FFPK+ GTP+K+EI+FIAPTGEE N +KQLEQ+
Sbjct: 2   ENAEEQQQQNEEVLSVELPAPSGWNKLFFPKKVGTPRKSEIVFIAPTGEEINTKKQLEQY 61

Query: 291 LKSHPGSIPISEFDWGTGETPRRSARISEKVKAT 392
           LK+HPG+  ISEFDWGTGETPRRSARISEKVK+T
Sbjct: 62  LKAHPGNPVISEFDWGTGETPRRSARISEKVKST 95


>ref|XP_002517633.1| Nucleosome-binding protein, putative [Ricinus communis]
           gi|223543265|gb|EEF44797.1| Nucleosome-binding protein,
           putative [Ricinus communis]
          Length = 331

 Score =  143 bits (361), Expect = 1e-32
 Identities = 64/84 (76%), Positives = 77/84 (91%)
 Frame = +3

Query: 141 DEIISVELPAPLGWTKKFFPKQGGTPKKNEIIFIAPTGEEFNNRKQLEQFLKSHPGSIPI 320
           +E++SVELPAP  W K +FPK+ GTP+K+EI+FI+PTGEE N+RKQLEQ+LKSHPG+ PI
Sbjct: 5   EEVVSVELPAPSSWKKMYFPKRAGTPRKSEIMFISPTGEEINSRKQLEQYLKSHPGNPPI 64

Query: 321 SEFDWGTGETPRRSARISEKVKAT 392
           +EFDWGTGETPRRSARISEKVKAT
Sbjct: 65  AEFDWGTGETPRRSARISEKVKAT 88


>ref|NP_001240074.1| uncharacterized protein LOC100776785 [Glycine max]
           gi|255645971|gb|ACU23474.1| unknown [Glycine max]
          Length = 275

 Score =  142 bits (359), Expect = 2e-32
 Identities = 65/86 (75%), Positives = 78/86 (90%)
 Frame = +3

Query: 135 QDDEIISVELPAPLGWTKKFFPKQGGTPKKNEIIFIAPTGEEFNNRKQLEQFLKSHPGSI 314
           Q+DE++SVELPAP GW K FFPK+ GTP+K+EI+FIAPTGEE + +KQLEQ+LK+HPG+ 
Sbjct: 10  QNDEVLSVELPAPSGWNKLFFPKKLGTPRKSEIVFIAPTGEEISTKKQLEQYLKAHPGNP 69

Query: 315 PISEFDWGTGETPRRSARISEKVKAT 392
            ISEFDWGTGETPRRSARISEKVK+T
Sbjct: 70  VISEFDWGTGETPRRSARISEKVKST 95


>emb|CBI28258.3| unnamed protein product [Vitis vinifera]
          Length = 315

 Score =  140 bits (354), Expect = 8e-32
 Identities = 65/102 (63%), Positives = 83/102 (81%)
 Frame = +3

Query: 87  MATSSAEKKDIEIKKPQDDEIISVELPAPLGWTKKFFPKQGGTPKKNEIIFIAPTGEEFN 266
           MAT+ A+K D   ++   D+++S++LPAP GWTKKF PK+GGTP++NEIIF++PTGEE  
Sbjct: 1   MATAQADK-DFMKEQHSPDDVVSIDLPAPQGWTKKFTPKKGGTPRRNEIIFVSPTGEEIK 59

Query: 267 NRKQLEQFLKSHPGSIPISEFDWGTGETPRRSARISEKVKAT 392
           NR QL++FLKSHPG    SEFDWGTG++PRRSARIS K KAT
Sbjct: 60  NRSQLDRFLKSHPGGPSCSEFDWGTGDSPRRSARISGKSKAT 101


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