BLASTX nr result
ID: Coptis24_contig00004313
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00004313
(679 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284402.1| PREDICTED: UDP-glucose 6-dehydrogenase [Viti... 114 6e-25
ref|NP_001066706.1| Os12g0443600 [Oryza sativa Japonica Group] g... 113 1e-24
ref|NP_001066705.1| Os12g0443500 [Oryza sativa Japonica Group] g... 113 1e-24
dbj|BAJ88568.1| predicted protein [Hordeum vulgare subsp. vulgare] 113 1e-24
ref|NP_001149225.1| LOC100282847 [Zea mays] gi|195625582|gb|ACG3... 112 2e-24
>ref|XP_002284402.1| PREDICTED: UDP-glucose 6-dehydrogenase [Vitis vinifera]
gi|147859988|emb|CAN81053.1| hypothetical protein
VITISV_021451 [Vitis vinifera]
Length = 480
Score = 114 bits (285), Expect(2) = 6e-25
Identities = 69/117 (58%), Positives = 83/117 (70%), Gaps = 12/117 (10%)
Frame = +1
Query: 94 HNSKGINYQILSNPSSLQKG-----LLSMISLLLIVPSGGRGNPC------ALKSVYAHW 240
HNSKGI+YQILSNP L +G LL+ +L+ GGR P ALK VYAHW
Sbjct: 143 HNSKGISYQILSNPEFLAEGTAIQDLLNPDRVLI----GGRETPGGQKAIKALKDVYAHW 198
Query: 241 MPKH*NISTSLWCAELVKLAANALVAQRISSVNAISAFCEASGADVAEVS-LVGKDT 408
+P+ IST+LW AEL KLAANA +AQRISSVNA+SA CEA+GADV+EVS +GKD+
Sbjct: 199 VPEDRIISTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGADVSEVSHAIGKDS 255
Score = 25.8 bits (55), Expect(2) = 6e-25
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3
Query: 417 GLPEVANYWE 446
GLPEVANYW+
Sbjct: 288 GLPEVANYWK 297
Score = 57.0 bits (136), Expect = 3e-06
Identities = 35/61 (57%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Frame = +3
Query: 3 MIADVSKHDKIVVEKSKVLVETAEVIEMILT-QQQGNQLSNSLKPKFFAEGTAIDDLFAL 179
MIADVSK +KIVVEKS V V+TAE IE IL+ +G P+F AEGTAI DL
Sbjct: 112 MIADVSKSNKIVVEKSTVPVKTAEAIEKILSHNSKGISYQILSNPEFLAEGTAIQDLLNP 171
Query: 180 D 182
D
Sbjct: 172 D 172
>ref|NP_001066706.1| Os12g0443600 [Oryza sativa Japonica Group]
gi|77554941|gb|ABA97737.1| UDP-glucose 6-dehydrogenase,
putative, expressed [Oryza sativa Japonica Group]
gi|77554942|gb|ABA97738.1| UDP-glucose 6-dehydrogenase,
putative, expressed [Oryza sativa Japonica Group]
gi|108862619|gb|ABG22007.1| UDP-glucose 6-dehydrogenase,
putative, expressed [Oryza sativa Japonica Group]
gi|113649213|dbj|BAF29725.1| Os12g0443600 [Oryza sativa
Japonica Group] gi|215704487|dbj|BAG93921.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|215737390|dbj|BAG96319.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218186796|gb|EEC69223.1| hypothetical protein
OsI_38225 [Oryza sativa Indica Group]
gi|222617027|gb|EEE53159.1| hypothetical protein
OsJ_35986 [Oryza sativa Japonica Group]
Length = 480
Score = 113 bits (283), Expect(2) = 1e-24
Identities = 70/116 (60%), Positives = 81/116 (69%), Gaps = 11/116 (9%)
Frame = +1
Query: 94 HNSKGINYQILSNPSSLQKGL----LSMISLLLIVPSGGRGNP------CALKSVYAHWM 243
HNSKGINYQILSNP L +G L +LI GGR P ALK VYAHW+
Sbjct: 143 HNSKGINYQILSNPEFLAEGTAIEDLFKPDRVLI---GGRETPEGKKAVQALKEVYAHWV 199
Query: 244 PKH*NISTSLWCAELVKLAANALVAQRISSVNAISAFCEASGADVAEVS-LVGKDT 408
P+ I+T+LW AEL KLAANA +AQRISSVNAISA CEA+GA+V+EV+ VGKDT
Sbjct: 200 PEDRIITTNLWSAELSKLAANAFLAQRISSVNAISALCEATGANVSEVAYAVGKDT 255
Score = 25.8 bits (55), Expect(2) = 1e-24
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3
Query: 417 GLPEVANYWE 446
GLPEVANYW+
Sbjct: 288 GLPEVANYWK 297
Score = 63.9 bits (154), Expect = 3e-08
Identities = 38/61 (62%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Frame = +3
Query: 3 MIADVSKHDKIVVEKSKVLVETAEVIEMILT-QQQGNQLSNSLKPKFFAEGTAIDDLFAL 179
MIADVSK DKIVVEKS V V+TAE IE ILT +G P+F AEGTAI+DLF
Sbjct: 112 MIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGINYQILSNPEFLAEGTAIEDLFKP 171
Query: 180 D 182
D
Sbjct: 172 D 172
>ref|NP_001066705.1| Os12g0443500 [Oryza sativa Japonica Group]
gi|77554940|gb|ABA97736.1| UDP-glucose 6-dehydrogenase,
putative, expressed [Oryza sativa Japonica Group]
gi|113649212|dbj|BAF29724.1| Os12g0443500 [Oryza sativa
Japonica Group] gi|218186795|gb|EEC69222.1| hypothetical
protein OsI_38224 [Oryza sativa Indica Group]
gi|222617026|gb|EEE53158.1| hypothetical protein
OsJ_35985 [Oryza sativa Japonica Group]
Length = 480
Score = 113 bits (282), Expect(2) = 1e-24
Identities = 70/116 (60%), Positives = 81/116 (69%), Gaps = 11/116 (9%)
Frame = +1
Query: 94 HNSKGINYQILSNPSSLQKGL----LSMISLLLIVPSGGRGNP------CALKSVYAHWM 243
HNSKGINYQILSNP L +G L +LI GGR P ALK VYAHW+
Sbjct: 143 HNSKGINYQILSNPEFLAEGTAIEDLFKPDRVLI---GGRETPEGKKAVQALKEVYAHWV 199
Query: 244 PKH*NISTSLWCAELVKLAANALVAQRISSVNAISAFCEASGADVAEVSL-VGKDT 408
P+ I+T+LW AEL KLAANA +AQRISSVNAISA CEA+GA+VAEV+ VGKD+
Sbjct: 200 PEDRIITTNLWSAELSKLAANAFLAQRISSVNAISALCEATGANVAEVAYSVGKDS 255
Score = 25.8 bits (55), Expect(2) = 1e-24
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3
Query: 417 GLPEVANYWE 446
GLPEVANYW+
Sbjct: 288 GLPEVANYWK 297
Score = 63.9 bits (154), Expect = 3e-08
Identities = 38/61 (62%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Frame = +3
Query: 3 MIADVSKHDKIVVEKSKVLVETAEVIEMILT-QQQGNQLSNSLKPKFFAEGTAIDDLFAL 179
MIADVSK DKIVVEKS V V+TAE IE ILT +G P+F AEGTAI+DLF
Sbjct: 112 MIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGINYQILSNPEFLAEGTAIEDLFKP 171
Query: 180 D 182
D
Sbjct: 172 D 172
>dbj|BAJ88568.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 480
Score = 113 bits (282), Expect(2) = 1e-24
Identities = 69/116 (59%), Positives = 82/116 (70%), Gaps = 11/116 (9%)
Frame = +1
Query: 94 HNSKGINYQILSNPSSLQKGL----LSMISLLLIVPSGGRGNPC------ALKSVYAHWM 243
HNSKGINYQILSNP L +G L +LI GGR P ALKSVYAHW+
Sbjct: 143 HNSKGINYQILSNPEFLAEGTAIDDLFKPDRVLI---GGRETPEGRKAVEALKSVYAHWV 199
Query: 244 PKH*NISTSLWCAELVKLAANALVAQRISSVNAISAFCEASGADVAEVS-LVGKDT 408
P+ I+T+LW AEL KLAANA +AQRISSVNA+SA CEA+GA+V+EVS +GKD+
Sbjct: 200 PEENIITTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANVSEVSYAIGKDS 255
Score = 25.8 bits (55), Expect(2) = 1e-24
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3
Query: 417 GLPEVANYWE 446
GLPEVANYW+
Sbjct: 288 GLPEVANYWK 297
Score = 65.5 bits (158), Expect = 9e-09
Identities = 39/61 (63%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Frame = +3
Query: 3 MIADVSKHDKIVVEKSKVLVETAEVIEMILT-QQQGNQLSNSLKPKFFAEGTAIDDLFAL 179
MIADVSK DKIVVEKS V V+TAE IE ILT +G P+F AEGTAIDDLF
Sbjct: 112 MIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGINYQILSNPEFLAEGTAIDDLFKP 171
Query: 180 D 182
D
Sbjct: 172 D 172
>ref|NP_001149225.1| LOC100282847 [Zea mays] gi|195625582|gb|ACG34621.1| UDP-glucose
6-dehydrogenase [Zea mays]
Length = 480
Score = 112 bits (281), Expect(2) = 2e-24
Identities = 69/116 (59%), Positives = 81/116 (69%), Gaps = 11/116 (9%)
Frame = +1
Query: 94 HNSKGINYQILSNPSSLQKGL----LSMISLLLIVPSGGRGNP------CALKSVYAHWM 243
HNSKGINYQILSNP L +G L +LI GGR P ALK VYAHW+
Sbjct: 143 HNSKGINYQILSNPEFLAEGTAIEDLFKPDRVLI---GGRETPEGRKAVQALKDVYAHWV 199
Query: 244 PKH*NISTSLWCAELVKLAANALVAQRISSVNAISAFCEASGADVAEVS-LVGKDT 408
P+ ++T+LW AEL KLAANA +AQRISSVNAISA CEA+GA+V+EV+ VGKDT
Sbjct: 200 PEDRILTTNLWSAELSKLAANAFLAQRISSVNAISALCEATGANVSEVAYAVGKDT 255
Score = 25.8 bits (55), Expect(2) = 2e-24
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3
Query: 417 GLPEVANYWE 446
GLPEVANYW+
Sbjct: 288 GLPEVANYWK 297
Score = 63.9 bits (154), Expect = 3e-08
Identities = 38/61 (62%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Frame = +3
Query: 3 MIADVSKHDKIVVEKSKVLVETAEVIEMILT-QQQGNQLSNSLKPKFFAEGTAIDDLFAL 179
MIADVSK DKIVVEKS V V+TAE IE ILT +G P+F AEGTAI+DLF
Sbjct: 112 MIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGINYQILSNPEFLAEGTAIEDLFKP 171
Query: 180 D 182
D
Sbjct: 172 D 172