BLASTX nr result

ID: Coptis24_contig00004261 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004261
         (1094 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273917.1| PREDICTED: uncharacterized protein LOC100242...   157   6e-36
ref|XP_002276709.1| PREDICTED: uncharacterized protein LOC100250...   151   3e-34
ref|NP_001237336.1| uncharacterized protein LOC100306344 [Glycin...   150   4e-34
ref|XP_002510707.1| conserved hypothetical protein [Ricinus comm...   150   7e-34
ref|XP_003527290.1| PREDICTED: uncharacterized protein LOC100527...   149   9e-34

>ref|XP_002273917.1| PREDICTED: uncharacterized protein LOC100242710 [Vitis vinifera]
           gi|297745580|emb|CBI40745.3| unnamed protein product
           [Vitis vinifera]
          Length = 171

 Score =  157 bits (396), Expect = 6e-36
 Identities = 88/139 (63%), Positives = 99/139 (71%), Gaps = 7/139 (5%)
 Frame = -1

Query: 785 NLSLIPVYQKKGKFSTLKRSLTVQAGYSGDAGRPSSASXXXXXXXXXXXXXXXXGCVYAP 606
           NLS  P +  K +F T KR+LTVQA YS D G+ S+A+                GCVYAP
Sbjct: 31  NLSFNPNHVGKVQFFTSKRALTVQAAYSDDGGKQSNANFFLGGFVLGGLIVGTLGCVYAP 90

Query: 605 QISKALAGTDRKDLMRKLPKFIYDEEKALERTRKILAEKIEQLNSAIDDVSSQLR----- 441
           QISKALAG DRKDLMRKLPKFIYDEEKALE+TRKILA+KI+QLNSAIDDVSSQLR     
Sbjct: 91  QISKALAGADRKDLMRKLPKFIYDEEKALEKTRKILAQKIDQLNSAIDDVSSQLRSEDSP 150

Query: 440 --ADDTPNGVAVVSDEIEA 390
             ADD PNG  + SDE+EA
Sbjct: 151 DEADDAPNGATINSDEMEA 169


>ref|XP_002276709.1| PREDICTED: uncharacterized protein LOC100250729 [Vitis vinifera]
          Length = 162

 Score =  151 bits (381), Expect = 3e-34
 Identities = 87/133 (65%), Positives = 93/133 (69%)
 Frame = -1

Query: 785 NLSLIPVYQKKGKFSTLKRSLTVQAGYSGDAGRPSSASXXXXXXXXXXXXXXXXGCVYAP 606
           NLSL        K    K  LT++A  +GD GRPSSAS                GCVYAP
Sbjct: 31  NLSLCSTSAGNTKHLANKSLLTIRA--AGDGGRPSSASIFVGGFILGGIVVGTLGCVYAP 88

Query: 605 QISKALAGTDRKDLMRKLPKFIYDEEKALERTRKILAEKIEQLNSAIDDVSSQLRADDTP 426
           QISKALAG DRKDLMRKLPKFIYDEEKALE+TRKIL EKI QLNSAIDDVS+QLRADD P
Sbjct: 89  QISKALAGADRKDLMRKLPKFIYDEEKALEKTRKILTEKIAQLNSAIDDVSAQLRADDAP 148

Query: 425 NGVAVVSDEIEAT 387
           NG AV  DEIEA+
Sbjct: 149 NGSAVNPDEIEAS 161


>ref|NP_001237336.1| uncharacterized protein LOC100306344 [Glycine max]
           gi|255628263|gb|ACU14476.1| unknown [Glycine max]
          Length = 163

 Score =  150 bits (380), Expect = 4e-34
 Identities = 86/132 (65%), Positives = 97/132 (73%)
 Frame = -1

Query: 785 NLSLIPVYQKKGKFSTLKRSLTVQAGYSGDAGRPSSASXXXXXXXXXXXXXXXXGCVYAP 606
           N SL    Q   + S  +R LT+QA YS D GRPSSAS                GCVYAP
Sbjct: 31  NFSLNLNRQGTMQTSLTRRPLTIQATYS-DGGRPSSASVFVGGFLLGGLIVGTLGCVYAP 89

Query: 605 QISKALAGTDRKDLMRKLPKFIYDEEKALERTRKILAEKIEQLNSAIDDVSSQLRADDTP 426
           QISKALAG DRK+LMRKLPKFIYDEEKALE+TRK+LAEKIEQLN+AIDDVS+QLR+++  
Sbjct: 90  QISKALAGADRKELMRKLPKFIYDEEKALEKTRKVLAEKIEQLNAAIDDVSAQLRSEEAS 149

Query: 425 NGVAVVSDEIEA 390
           NGVAV SDEIEA
Sbjct: 150 NGVAVNSDEIEA 161


>ref|XP_002510707.1| conserved hypothetical protein [Ricinus communis]
           gi|223551408|gb|EEF52894.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 166

 Score =  150 bits (378), Expect = 7e-34
 Identities = 84/122 (68%), Positives = 95/122 (77%)
 Frame = -1

Query: 755 KGKFSTLKRSLTVQAGYSGDAGRPSSASXXXXXXXXXXXXXXXXGCVYAPQISKALAGTD 576
           K + +T +RSLTV+A  + D GRPSS S                GCVYAPQISKALAGTD
Sbjct: 46  KVQLTTSRRSLTVRA--ASDDGRPSSGSIFVGGFVLGGLIVGALGCVYAPQISKALAGTD 103

Query: 575 RKDLMRKLPKFIYDEEKALERTRKILAEKIEQLNSAIDDVSSQLRADDTPNGVAVVSDEI 396
           RKDLMRKLPKFIYDEEKALE+TRK+L EKI QLNSAIDDVS+QLR+DD+PNGVA V+DEI
Sbjct: 104 RKDLMRKLPKFIYDEEKALEKTRKVLTEKIAQLNSAIDDVSAQLRSDDSPNGVA-VNDEI 162

Query: 395 EA 390
           EA
Sbjct: 163 EA 164


>ref|XP_003527290.1| PREDICTED: uncharacterized protein LOC100527765 [Glycine max]
          Length = 163

 Score =  149 bits (377), Expect = 9e-34
 Identities = 81/118 (68%), Positives = 92/118 (77%)
 Frame = -1

Query: 743 STLKRSLTVQAGYSGDAGRPSSASXXXXXXXXXXXXXXXXGCVYAPQISKALAGTDRKDL 564
           S  +R LT+QA YS D GRPSSAS                GCVYAPQISKA+AG DRK+L
Sbjct: 45  SLTRRPLTIQATYS-DGGRPSSASVFVGGFLLGGLIVGTLGCVYAPQISKAIAGADRKEL 103

Query: 563 MRKLPKFIYDEEKALERTRKILAEKIEQLNSAIDDVSSQLRADDTPNGVAVVSDEIEA 390
           MRKLPKFIYDEEKALE+TRK+LAEKIEQLN+AIDDVS+QLR+++  NGVAV SDEIEA
Sbjct: 104 MRKLPKFIYDEEKALEKTRKVLAEKIEQLNAAIDDVSAQLRSEEASNGVAVNSDEIEA 161


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