BLASTX nr result

ID: Coptis24_contig00004249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004249
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37243.3| unnamed protein product [Vitis vinifera]              140   1e-31
ref|XP_002265367.1| PREDICTED: CLIP-associating protein-like [Vi...   140   1e-31
emb|CAN66676.1| hypothetical protein VITISV_032909 [Vitis vinifera]   140   1e-31
ref|XP_002521154.1| conserved hypothetical protein [Ricinus comm...   140   1e-31
gb|ADE77104.1| unknown [Picea sitchensis]                             139   2e-31

>emb|CBI37243.3| unnamed protein product [Vitis vinifera]
          Length = 275

 Score =  140 bits (353), Expect = 1e-31
 Identities = 68/83 (81%), Positives = 77/83 (92%)
 Frame = +3

Query: 3   LLVEMLTNQKDSMDDSVEVVLEKLLHVNKDMVAKVSSEAERCLTIVLCQYDPFRCLTVIV 182
           L+VEML NQK SM+DSVE+V+EKLLHV KD+V KVS+EAE CLTIVL QYDPFRCL+VI+
Sbjct: 109 LIVEMLKNQKGSMEDSVEIVIEKLLHVAKDIVPKVSNEAEHCLTIVLSQYDPFRCLSVII 168

Query: 183 PLLVSEDEKTLVTCINCLTKLVG 251
           PLLV+EDEKTLVTCINCLTKLVG
Sbjct: 169 PLLVTEDEKTLVTCINCLTKLVG 191


>ref|XP_002265367.1| PREDICTED: CLIP-associating protein-like [Vitis vinifera]
          Length = 1440

 Score =  140 bits (353), Expect = 1e-31
 Identities = 68/83 (81%), Positives = 77/83 (92%)
 Frame = +3

Query: 3    LLVEMLTNQKDSMDDSVEVVLEKLLHVNKDMVAKVSSEAERCLTIVLCQYDPFRCLTVIV 182
            L+VEML NQK SM+DSVE+V+EKLLHV KD+V KVS+EAE CLTIVL QYDPFRCL+VI+
Sbjct: 1274 LIVEMLKNQKGSMEDSVEIVIEKLLHVAKDIVPKVSNEAEHCLTIVLSQYDPFRCLSVII 1333

Query: 183  PLLVSEDEKTLVTCINCLTKLVG 251
            PLLV+EDEKTLVTCINCLTKLVG
Sbjct: 1334 PLLVTEDEKTLVTCINCLTKLVG 1356


>emb|CAN66676.1| hypothetical protein VITISV_032909 [Vitis vinifera]
          Length = 1135

 Score =  140 bits (353), Expect = 1e-31
 Identities = 68/83 (81%), Positives = 77/83 (92%)
 Frame = +3

Query: 3    LLVEMLTNQKDSMDDSVEVVLEKLLHVNKDMVAKVSSEAERCLTIVLCQYDPFRCLTVIV 182
            L+VEML NQK SM+DSVE+V+EKLLHV KD+V KVS+EAE CLTIVL QYDPFRCL+VI+
Sbjct: 969  LIVEMLKNQKGSMEDSVEIVIEKLLHVAKDIVPKVSNEAEHCLTIVLSQYDPFRCLSVII 1028

Query: 183  PLLVSEDEKTLVTCINCLTKLVG 251
            PLLV+EDEKTLVTCINCLTKLVG
Sbjct: 1029 PLLVTEDEKTLVTCINCLTKLVG 1051


>ref|XP_002521154.1| conserved hypothetical protein [Ricinus communis]
            gi|223539723|gb|EEF41305.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1384

 Score =  140 bits (352), Expect = 1e-31
 Identities = 67/83 (80%), Positives = 78/83 (93%)
 Frame = +3

Query: 3    LLVEMLTNQKDSMDDSVEVVLEKLLHVNKDMVAKVSSEAERCLTIVLCQYDPFRCLTVIV 182
            L+VEML NQKD+++DS+EVV+EKLLHV KD+V KVS+EAE CL+IVL QYDPFRCL+VIV
Sbjct: 1218 LIVEMLKNQKDAVEDSIEVVIEKLLHVTKDVVPKVSNEAEHCLSIVLSQYDPFRCLSVIV 1277

Query: 183  PLLVSEDEKTLVTCINCLTKLVG 251
            PLLV+EDEKTLVTCINCLTKLVG
Sbjct: 1278 PLLVTEDEKTLVTCINCLTKLVG 1300


>gb|ADE77104.1| unknown [Picea sitchensis]
          Length = 227

 Score =  139 bits (351), Expect = 2e-31
 Identities = 66/83 (79%), Positives = 77/83 (92%)
 Frame = +3

Query: 3   LLVEMLTNQKDSMDDSVEVVLEKLLHVNKDMVAKVSSEAERCLTIVLCQYDPFRCLTVIV 182
           ++VEML+NQKD+++DSVE +LEKLLH  KD+VAKVSSEA+RC TIVL QYDP+RCLTV+V
Sbjct: 61  VIVEMLSNQKDTLEDSVETLLEKLLHATKDLVAKVSSEADRCATIVLSQYDPYRCLTVVV 120

Query: 183 PLLVSEDEKTLVTCINCLTKLVG 251
           PLLVSEDEKTLVTCI CLTKLVG
Sbjct: 121 PLLVSEDEKTLVTCIGCLTKLVG 143