BLASTX nr result

ID: Coptis24_contig00004180 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004180
         (1526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546086.1| PREDICTED: uncharacterized protein LOC100807...   570   e-160
ref|XP_004134601.1| PREDICTED: uncharacterized protein LOC101220...   568   e-159
emb|CBI30867.3| unnamed protein product [Vitis vinifera]              558   e-156
ref|XP_002275370.1| PREDICTED: uncharacterized protein LOC100253...   558   e-156
ref|XP_002519690.1| conserved hypothetical protein [Ricinus comm...   558   e-156

>ref|XP_003546086.1| PREDICTED: uncharacterized protein LOC100807088 [Glycine max]
          Length = 393

 Score =  570 bits (1469), Expect = e-160
 Identities = 284/384 (73%), Positives = 329/384 (85%), Gaps = 6/384 (1%)
 Frame = +3

Query: 123  VSVCLLLFISHSA-TTIAEDGLVSNGDFEMAPT----DEGVRDGPVSISDWKLNGTVEMI 287
            VS+  LLF+SHS  TT AEDGLV+NGDFE++P+    +E + +GP  + +WK NG VE++
Sbjct: 11   VSIFTLLFLSHSPLTTFAEDGLVANGDFEVSPSSGFPNEAIVEGPSEVPNWKSNGNVELV 70

Query: 288  ESGQRQGGMILIVPQGLRAVRLGNDAEISQELKLEKGSLYSVTFSAARTCAQLESLNISV 467
            ESGQ+QGGMILIVPQG  AVRLGNDAEISQEL +EKGS+YS+TF AARTCAQLES+N+SV
Sbjct: 71   ESGQKQGGMILIVPQGRHAVRLGNDAEISQELPVEKGSIYSLTFCAARTCAQLESINVSV 130

Query: 468  PPASQTIDLQTLYSIQGWDTYAWSFQAESDNGRVVFRNPGMEDDPTCGPIIDDIAIKKLF 647
             PASQT+DLQTLY++QGW+ YA SF A+ D  R+VF+NPGMEDDPTCGPIID+IAIKKLF
Sbjct: 131  APASQTVDLQTLYNVQGWNPYAVSFNADEDTFRLVFKNPGMEDDPTCGPIIDNIAIKKLF 190

Query: 648  TPDKPKDNVVLNGDFEEGPWMFRNDSLGVLLPTNLDEDISSLPGWIVESNRAVRYIDSYH 827
            TPDKPKDN V+NGDFEEGPWMFRN SLGVLLPTNLDE+ SSLPGWIVESNRAVRYIDS H
Sbjct: 191  TPDKPKDNAVINGDFEEGPWMFRNTSLGVLLPTNLDEEASSLPGWIVESNRAVRYIDSDH 250

Query: 828  FSVPQGKRAIELLSGKEGIISQMVDTTPQKQYNLIFSLGQAGDKCQQPLAIMAFAGDQAQ 1007
            +SVPQG+RAIELLSGKEGIISQMV+T P K Y+L FSLG A DKC++PLA+MAFAGDQAQ
Sbjct: 251  YSVPQGRRAIELLSGKEGIISQMVETKPDKLYSLTFSLGHADDKCKEPLAVMAFAGDQAQ 310

Query: 1008 NIHYLPMANSTYDTANLTFTAKADRTRIAFYSVYYNTRTDDKSSLCGPVVDDVRVWGLSR 1187
            NIHY P +NST+ TAN+ FTAKA+RTRIAFYS+YYNTR+DD SSLCGPVVDDVRVW    
Sbjct: 311  NIHYTPNSNSTFQTANVNFTAKAERTRIAFYSIYYNTRSDDMSSLCGPVVDDVRVW---F 367

Query: 1188 SERNMCADLGL-RLMLLILAFVLL 1256
            S  N    LGL RL+L+IL  VL+
Sbjct: 368  SGSNGLRGLGLGRLVLVILGLVLV 391


>ref|XP_004134601.1| PREDICTED: uncharacterized protein LOC101220961 [Cucumis sativus]
            gi|449518599|ref|XP_004166324.1| PREDICTED:
            uncharacterized LOC101220961 [Cucumis sativus]
          Length = 394

 Score =  568 bits (1463), Expect = e-159
 Identities = 283/385 (73%), Positives = 325/385 (84%), Gaps = 9/385 (2%)
 Frame = +3

Query: 123  VSVCLLLFISHSATTIAEDGLVSNGDFEMAPT----DEGVRDGPVSISDWKLNGTVEMIE 290
            +S+ LL+F   ++  +A+DGLV+NGDFE  P+    ++G  +GP +I  W  NGTVE++E
Sbjct: 11   LSLILLVFAHFASQILADDGLVANGDFETIPSGGFPNDGAIEGPTAIPSWTSNGTVELVE 70

Query: 291  SGQRQGGMILIVPQGLRAVRLGNDAEISQELKLEKGSLYSVTFSAARTCAQLESLNISVP 470
            SGQ+QGGMILIVP+G  AVRLGNDAEISQELK+EKG+LYSVTFSAARTCAQLESLN+SVP
Sbjct: 71   SGQKQGGMILIVPEGRHAVRLGNDAEISQELKVEKGALYSVTFSAARTCAQLESLNVSVP 130

Query: 471  PASQTIDLQTLYSIQGWDTYAWSFQAESDNGRVVFRNPGMEDDPTCGPIIDDIAIKKLFT 650
            P+SQTIDLQTLYS+QGWD Y ++F+ E +  R+VFRNPGMEDDPTCGPIIDDIAIKK+F 
Sbjct: 131  PSSQTIDLQTLYSVQGWDPYTYAFEPEEETVRLVFRNPGMEDDPTCGPIIDDIAIKKIFI 190

Query: 651  PDKPKDNVVLNGDFEEGPWMFRNDSLGVLLPTNLDEDISSLPGWIVESNRAVRYIDSYHF 830
            PD+PKDN V NGDFE GPWMFRN SLGVL+PTNLDE+ SSLPGWIVESNRAVRYIDSYHF
Sbjct: 191  PDRPKDNAVNNGDFESGPWMFRNGSLGVLIPTNLDEETSSLPGWIVESNRAVRYIDSYHF 250

Query: 831  SVPQGKRAIELLSGKEGIISQMVDTTPQKQYNLIFSLGQAGDKCQQPLAIMAFAGDQAQN 1010
            +VPQGKRAIELLSGKEGIISQMV+TTP+K Y + FSLGQAGDKC+QPLA+MAFAGDQAQN
Sbjct: 251  NVPQGKRAIELLSGKEGIISQMVETTPEKPYTMTFSLGQAGDKCKQPLAVMAFAGDQAQN 310

Query: 1011 IHYL-PMANSTYDTANLTFTAKADRTRIAFYSVYYNTRTDDKSSLCGPVVDDVRVWGLSR 1187
             HY  P +NS++ + NL FTAKADRTRIAFYSVYYNTRTDD SSLCGPVVDDVRVW  S 
Sbjct: 311  FHYTGPDSNSSFQSVNLNFTAKADRTRIAFYSVYYNTRTDDMSSLCGPVVDDVRVW-FSS 369

Query: 1188 SERN----MCADLGLRLMLLILAFV 1250
            S RN        +GL L LLI A V
Sbjct: 370  SCRNGPGFWAFGVGLGLWLLIWALV 394


>emb|CBI30867.3| unnamed protein product [Vitis vinifera]
          Length = 392

 Score =  558 bits (1439), Expect = e-156
 Identities = 275/384 (71%), Positives = 320/384 (83%), Gaps = 8/384 (2%)
 Frame = +3

Query: 123  VSVCLLLFISHSATTIAEDGLVSNGDFEMAPT----DEGVRDGPVSISDWKLNGTVEMIE 290
            VS+C++ F +H  + +A+DG + NGDFE  PT    +EG+ DGP +I +WK NGTVE++E
Sbjct: 11   VSLCVVFF-AHFVSVMADDGPLLNGDFESPPTGGFSNEGLVDGPTTIPNWKTNGTVELVE 69

Query: 291  SGQRQGGMILIVPQGLRAVRLGNDAEISQELKLEKGSLYSVTFSAARTCAQLESLNISVP 470
            SGQ+QGGMILIVPQG  AVRLGNDAEISQE+K+EKG +YS+TFSAARTCAQLES+N+SV 
Sbjct: 70   SGQKQGGMILIVPQGKHAVRLGNDAEISQEMKVEKGFIYSITFSAARTCAQLESINVSVG 129

Query: 471  PASQTIDLQTLYSIQGWDTYAWSFQAESDNGRVVFRNPGMEDDPTCGPIIDDIAIKKLFT 650
             ASQ IDLQTLY++QGWD YAW+F AE ++  VVFRNPGMEDDPTCGPIIDD+AIKKLFT
Sbjct: 130  AASQNIDLQTLYNVQGWDPYAWAFSAEEEDAHVVFRNPGMEDDPTCGPIIDDVAIKKLFT 189

Query: 651  PDKPKDNVVLNGDFEEGPWMFRNDSLGVLLPTNLDEDISSLPGWIVESNRAVRYIDSYHF 830
            PD PKDN V NGDFEEGPWM++N SLGVLLPTNLDE+ SSLPGWIVESNRAVR+IDS HF
Sbjct: 190  PDPPKDNAVTNGDFEEGPWMYKNASLGVLLPTNLDEETSSLPGWIVESNRAVRFIDSDHF 249

Query: 831  SVPQGKRAIELLSGKEGIISQMVDTTPQKQYNLIFSLGQAGDKCQQPLAIMAFAGDQAQN 1010
            SVPQGKR IELLSGKEGIISQMV TTP K Y L FSLG AGD C+QPLAIMAFAGDQAQN
Sbjct: 250  SVPQGKRGIELLSGKEGIISQMVATTPNKPYKLTFSLGHAGDSCKQPLAIMAFAGDQAQN 309

Query: 1011 IHYLPMANSTYDTANLTFTAKADRTRIAFYSVYYNTRTDDKSSLCGPVVDDVRVWGLSRS 1190
            IHY+  ANST++T +L FT+KA+RTR+AFYSVYYNTR+DD SSLCGPVVDDV+VW  S +
Sbjct: 310  IHYVANANSTFETVDLNFTSKAERTRVAFYSVYYNTRSDDMSSLCGPVVDDVKVW-FSGA 368

Query: 1191 ERN----MCADLGLRLMLLILAFV 1250
             RN    +    G  L +L+L  V
Sbjct: 369  RRNGLGRLSLGFGFGLFVLLLVSV 392


>ref|XP_002275370.1| PREDICTED: uncharacterized protein LOC100253669 [Vitis vinifera]
          Length = 394

 Score =  558 bits (1439), Expect = e-156
 Identities = 275/384 (71%), Positives = 320/384 (83%), Gaps = 8/384 (2%)
 Frame = +3

Query: 123  VSVCLLLFISHSATTIAEDGLVSNGDFEMAPT----DEGVRDGPVSISDWKLNGTVEMIE 290
            VS+C++ F +H  + +A+DG + NGDFE  PT    +EG+ DGP +I +WK NGTVE++E
Sbjct: 13   VSLCVVFF-AHFVSVMADDGPLLNGDFESPPTGGFSNEGLVDGPTTIPNWKTNGTVELVE 71

Query: 291  SGQRQGGMILIVPQGLRAVRLGNDAEISQELKLEKGSLYSVTFSAARTCAQLESLNISVP 470
            SGQ+QGGMILIVPQG  AVRLGNDAEISQE+K+EKG +YS+TFSAARTCAQLES+N+SV 
Sbjct: 72   SGQKQGGMILIVPQGKHAVRLGNDAEISQEMKVEKGFIYSITFSAARTCAQLESINVSVG 131

Query: 471  PASQTIDLQTLYSIQGWDTYAWSFQAESDNGRVVFRNPGMEDDPTCGPIIDDIAIKKLFT 650
             ASQ IDLQTLY++QGWD YAW+F AE ++  VVFRNPGMEDDPTCGPIIDD+AIKKLFT
Sbjct: 132  AASQNIDLQTLYNVQGWDPYAWAFSAEEEDAHVVFRNPGMEDDPTCGPIIDDVAIKKLFT 191

Query: 651  PDKPKDNVVLNGDFEEGPWMFRNDSLGVLLPTNLDEDISSLPGWIVESNRAVRYIDSYHF 830
            PD PKDN V NGDFEEGPWM++N SLGVLLPTNLDE+ SSLPGWIVESNRAVR+IDS HF
Sbjct: 192  PDPPKDNAVTNGDFEEGPWMYKNASLGVLLPTNLDEETSSLPGWIVESNRAVRFIDSDHF 251

Query: 831  SVPQGKRAIELLSGKEGIISQMVDTTPQKQYNLIFSLGQAGDKCQQPLAIMAFAGDQAQN 1010
            SVPQGKR IELLSGKEGIISQMV TTP K Y L FSLG AGD C+QPLAIMAFAGDQAQN
Sbjct: 252  SVPQGKRGIELLSGKEGIISQMVATTPNKPYKLTFSLGHAGDSCKQPLAIMAFAGDQAQN 311

Query: 1011 IHYLPMANSTYDTANLTFTAKADRTRIAFYSVYYNTRTDDKSSLCGPVVDDVRVWGLSRS 1190
            IHY+  ANST++T +L FT+KA+RTR+AFYSVYYNTR+DD SSLCGPVVDDV+VW  S +
Sbjct: 312  IHYVANANSTFETVDLNFTSKAERTRVAFYSVYYNTRSDDMSSLCGPVVDDVKVW-FSGA 370

Query: 1191 ERN----MCADLGLRLMLLILAFV 1250
             RN    +    G  L +L+L  V
Sbjct: 371  RRNGLGRLSLGFGFGLFVLLLVSV 394


>ref|XP_002519690.1| conserved hypothetical protein [Ricinus communis]
            gi|223541107|gb|EEF42663.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 393

 Score =  558 bits (1438), Expect = e-156
 Identities = 273/378 (72%), Positives = 312/378 (82%), Gaps = 4/378 (1%)
 Frame = +3

Query: 135  LLLFISHSATTIAEDGLVSNGDFEMAPTD----EGVRDGPVSISDWKLNGTVEMIESGQR 302
            ++LF   ++ T  EDGLV+NG FE  P++    E + DGP  I  WKLNGTVE++ SGQ+
Sbjct: 15   IILFALFASATFGEDGLVTNGGFETPPSNGFPSEAIADGPSEIPSWKLNGTVELVSSGQK 74

Query: 303  QGGMILIVPQGLRAVRLGNDAEISQELKLEKGSLYSVTFSAARTCAQLESLNISVPPASQ 482
            QGGMILIVP G  AVRLGNDAEISQEL +EKGS+YS+TFSAARTCAQLESLN+SVP ASQ
Sbjct: 75   QGGMILIVPGGKHAVRLGNDAEISQELTVEKGSIYSITFSAARTCAQLESLNVSVPSASQ 134

Query: 483  TIDLQTLYSIQGWDTYAWSFQAESDNGRVVFRNPGMEDDPTCGPIIDDIAIKKLFTPDKP 662
            TIDLQT+Y++QGWD YAW+F+AE D   +VFRNPGMEDDPTCGPIIDDIAIKKLF PDKP
Sbjct: 135  TIDLQTVYNVQGWDPYAWAFEAEEDKVNLVFRNPGMEDDPTCGPIIDDIAIKKLFAPDKP 194

Query: 663  KDNVVLNGDFEEGPWMFRNDSLGVLLPTNLDEDISSLPGWIVESNRAVRYIDSYHFSVPQ 842
            KDN V+NGD EEGPWMFRN SLG+LLPTNLDE+ + LPGWIVESNRAVRYIDSYHFSVP+
Sbjct: 195  KDNAVMNGDLEEGPWMFRNVSLGILLPTNLDEETTPLPGWIVESNRAVRYIDSYHFSVPE 254

Query: 843  GKRAIELLSGKEGIISQMVDTTPQKQYNLIFSLGQAGDKCQQPLAIMAFAGDQAQNIHYL 1022
            GKRAIELLSGKEGIISQMV+TTP K Y L F+LG A DKC+ PLA+M FAGDQAQN+HY 
Sbjct: 255  GKRAIELLSGKEGIISQMVETTPNKAYTLSFALGHADDKCKPPLAVMVFAGDQAQNVHYT 314

Query: 1023 PMANSTYDTANLTFTAKADRTRIAFYSVYYNTRTDDKSSLCGPVVDDVRVWGLSRSERNM 1202
            P +NST+  A+L FTAKA+RTRIAFYSVYYNTRTDD SSLCGPVVD VRVW  S + R  
Sbjct: 315  PDSNSTFQIADLNFTAKAERTRIAFYSVYYNTRTDDMSSLCGPVVDGVRVW-FSSARRIA 373

Query: 1203 CADLGLRLMLLILAFVLL 1256
             + LGL + L     VL+
Sbjct: 374  VSGLGLGVGLTFWVLVLV 391


Top