BLASTX nr result

ID: Coptis24_contig00004000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004000
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282376.2| PREDICTED: uncharacterized protein LOC100250...    97   1e-18
emb|CBI20307.3| unnamed protein product [Vitis vinifera]               97   1e-18
ref|XP_002269383.2| PREDICTED: uncharacterized protein LOC100253...    92   6e-17
emb|CBI23965.3| unnamed protein product [Vitis vinifera]               92   6e-17
ref|XP_002282360.1| PREDICTED: uncharacterized protein LOC100260...    91   7e-17

>ref|XP_002282376.2| PREDICTED: uncharacterized protein LOC100250261 [Vitis vinifera]
          Length = 932

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 48/92 (52%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
 Frame = -2

Query: 273 LPEFMSFSELQCS-DEQRLRLLIRFSNTSHAVYRDALAPSTMLVGEGHWNGDYNPLHIVA 97
           LP+F+S +E QCS DE+RL+++++F N+S+  YR    PST L+GEG W+ + N L +VA
Sbjct: 286 LPQFISITEFQCSEDEERLQVMVKFQNSSYDYYR-TYNPSTTLIGEGSWDVNKNQLCLVA 344

Query: 96  CRFLNYRDSLANASVGDCLIRLSV*FPAIMTI 1
           CR LN  DSL +A +GDC I+LS+ FPAI++I
Sbjct: 345 CRILNEGDSLVDARIGDCSIKLSLRFPAILSI 376


>emb|CBI20307.3| unnamed protein product [Vitis vinifera]
          Length = 1709

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 48/92 (52%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
 Frame = -2

Query: 273  LPEFMSFSELQCS-DEQRLRLLIRFSNTSHAVYRDALAPSTMLVGEGHWNGDYNPLHIVA 97
            LP+F+S +E QCS DE+RL+++++F N+S+  YR    PST L+GEG W+ + N L +VA
Sbjct: 1121 LPQFISITEFQCSEDEERLQVMVKFQNSSYDYYR-TYNPSTTLIGEGSWDVNKNQLCLVA 1179

Query: 96   CRFLNYRDSLANASVGDCLIRLSV*FPAIMTI 1
            CR LN  DSL +A +GDC I+LS+ FPAI++I
Sbjct: 1180 CRILNEGDSLVDARIGDCSIKLSLRFPAILSI 1211



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
 Frame = -2

Query: 273 LPEFMSFSELQCSD-EQRLRLLIRFSNTSHAVYRDALAPSTMLVGEGHWNGDYNPLHIVA 97
           LP  +S   +QCS+ E+R  +L++F +  H        P+  LVGEG W+   + L +VA
Sbjct: 273 LPHIISTEVIQCSEYERRSLVLVKFQSDEHY---QPFHPNMTLVGEGWWDAKKSRLSVVA 329

Query: 96  CRFLNYRDSLANASVGDCLIRLSV*FPAIMTI 1
           CR  N ++SLANA VGDC +RLS+ F  I +I
Sbjct: 330 CRLSNLKNSLANAQVGDCSVRLSLRFNTIWSI 361


>ref|XP_002269383.2| PREDICTED: uncharacterized protein LOC100253928 [Vitis vinifera]
          Length = 708

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 43/90 (47%), Positives = 64/90 (71%)
 Frame = -2

Query: 270 PEFMSFSELQCSDEQRLRLLIRFSNTSHAVYRDALAPSTMLVGEGHWNGDYNPLHIVACR 91
           P+FMSF +++C D+ ++ +L+RFSN+S  ++R  + P   LV EG WN   N L++VACR
Sbjct: 73  PKFMSFDQVECQDDGKVHMLLRFSNSSSHLFRTFI-PDKTLVAEGAWNKKKNQLYVVACR 131

Query: 90  FLNYRDSLANASVGDCLIRLSV*FPAIMTI 1
            LN  +SLA+  VGDC I+L++ FPA M+I
Sbjct: 132 ILNVANSLADVFVGDCSIKLNLRFPATMSI 161


>emb|CBI23965.3| unnamed protein product [Vitis vinifera]
          Length = 604

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 43/90 (47%), Positives = 64/90 (71%)
 Frame = -2

Query: 270 PEFMSFSELQCSDEQRLRLLIRFSNTSHAVYRDALAPSTMLVGEGHWNGDYNPLHIVACR 91
           P+FMSF +++C D+ ++ +L+RFSN+S  ++R  + P   LV EG WN   N L++VACR
Sbjct: 147 PKFMSFDQVECQDDGKVHMLLRFSNSSSHLFRTFI-PDKTLVAEGAWNKKKNQLYVVACR 205

Query: 90  FLNYRDSLANASVGDCLIRLSV*FPAIMTI 1
            LN  +SLA+  VGDC I+L++ FPA M+I
Sbjct: 206 ILNVANSLADVFVGDCSIKLNLRFPATMSI 235


>ref|XP_002282360.1| PREDICTED: uncharacterized protein LOC100260511 [Vitis vinifera]
           gi|302143014|emb|CBI20309.3| unnamed protein product
           [Vitis vinifera]
          Length = 916

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 46/92 (50%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
 Frame = -2

Query: 273 LPEFMSFSELQCS-DEQRLRLLIRFSNTSHAVYRDALAPSTMLVGEGHWNGDYNPLHIVA 97
           LP F++    QCS DE+RL+++I+F N S+  Y    +P+  L+GEG W+   N L +VA
Sbjct: 288 LPHFINIKASQCSEDERRLKIMIKFHNFSYVDYNQLPSPNMTLIGEGWWDAKNNRLCVVA 347

Query: 96  CRFLNYRDSLANASVGDCLIRLSV*FPAIMTI 1
           CR LN   SLANA +GDC IRLS+ FPAI  I
Sbjct: 348 CRILNTMQSLANAHIGDCSIRLSLRFPAIWLI 379


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