BLASTX nr result
ID: Coptis24_contig00003999
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00003999
(728 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002298116.1| predicted protein [Populus trichocarpa] gi|2... 85 6e-20
ref|XP_002303265.1| predicted protein [Populus trichocarpa] gi|2... 85 6e-20
ref|XP_002333702.1| predicted protein [Populus trichocarpa] gi|2... 85 6e-20
ref|XP_002285272.1| PREDICTED: serine-threonine kinase receptor-... 84 1e-19
ref|XP_002517562.1| serine-threonine kinase receptor-associated ... 85 2e-19
>ref|XP_002298116.1| predicted protein [Populus trichocarpa] gi|222845374|gb|EEE82921.1|
predicted protein [Populus trichocarpa]
Length = 350
Score = 84.7 bits (208), Expect(2) = 6e-20
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +2
Query: 116 NSRPVVDLFYSPVTPDGFFLISASKDSSPMLRNGETGDWI 235
+SRPVVDLFYSPVTPDGFFLISASKDSSPMLRNGETGDWI
Sbjct: 15 HSRPVVDLFYSPVTPDGFFLISASKDSSPMLRNGETGDWI 54
Score = 38.9 bits (89), Expect(2) = 6e-20
Identities = 26/76 (34%), Positives = 31/76 (40%), Gaps = 36/76 (47%)
Frame = +1
Query: 223 GRLDFTAKIWDALTGDE------------------------------------NRPDATP 294
G DF+AK+WDALTGDE NRPDA P
Sbjct: 79 GSADFSAKLWDALTGDELQSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPP 138
Query: 295 REVDYLLGQLRVFLSW 342
REVD G +R ++W
Sbjct: 139 REVDNSPGSIRT-VAW 153
Score = 56.6 bits (135), Expect(2) = 5e-10
Identities = 24/33 (72%), Positives = 28/33 (84%)
Frame = +2
Query: 317 VNCVCFSPGGESYASGSEDGTIRIWQTGPMKYE 415
V+C+ FSPGGESYASGSEDGTIRIWQ P ++
Sbjct: 273 VHCLRFSPGGESYASGSEDGTIRIWQLSPASHD 305
Score = 33.5 bits (75), Expect(2) = 5e-10
Identities = 13/29 (44%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Frame = +3
Query: 414 NHDDGE-IPANGSVGKLKIAVDEVTRKIE 497
+HD+ + +P NG GK+K++ D+V +KIE
Sbjct: 303 SHDENDSLPGNGPTGKVKVSADDVAQKIE 331
>ref|XP_002303265.1| predicted protein [Populus trichocarpa] gi|222840697|gb|EEE78244.1|
predicted protein [Populus trichocarpa]
Length = 350
Score = 84.7 bits (208), Expect(2) = 6e-20
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +2
Query: 116 NSRPVVDLFYSPVTPDGFFLISASKDSSPMLRNGETGDWI 235
+SRPVVDLFYSPVTPDGFFLISASKDSSPMLRNGETGDWI
Sbjct: 15 HSRPVVDLFYSPVTPDGFFLISASKDSSPMLRNGETGDWI 54
Score = 38.9 bits (89), Expect(2) = 6e-20
Identities = 26/76 (34%), Positives = 31/76 (40%), Gaps = 36/76 (47%)
Frame = +1
Query: 223 GRLDFTAKIWDALTGDE------------------------------------NRPDATP 294
G DF+AK+WDALTGDE NRPDA P
Sbjct: 79 GSADFSAKLWDALTGDELHSFEHKHIVRACTFSEDTHLLLTGGVEKILRIFDLNRPDAPP 138
Query: 295 REVDYLLGQLRVFLSW 342
REVD G +R ++W
Sbjct: 139 REVDNSPGSIRT-VAW 153
Score = 57.8 bits (138), Expect(2) = 3e-11
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +2
Query: 317 VNCVCFSPGGESYASGSEDGTIRIWQTGP 403
V+C+ FSPGGESYASGSEDGTIRIWQ GP
Sbjct: 273 VHCLRFSPGGESYASGSEDGTIRIWQLGP 301
Score = 36.6 bits (83), Expect(2) = 3e-11
Identities = 14/30 (46%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Frame = +3
Query: 417 HDDGE-IPANGSVGKLKIAVDEVTRKIEGF 503
HD+ + +P NG GK++++ D+V +KIEGF
Sbjct: 304 HDENDSVPGNGPTGKVEVSADDVAQKIEGF 333
>ref|XP_002333702.1| predicted protein [Populus trichocarpa] gi|222838296|gb|EEE76661.1|
predicted protein [Populus trichocarpa]
Length = 298
Score = 84.7 bits (208), Expect(2) = 6e-20
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +2
Query: 116 NSRPVVDLFYSPVTPDGFFLISASKDSSPMLRNGETGDWI 235
+SRPVVDLFYSPVTPDGFFLISASKDSSPMLRNGETGDWI
Sbjct: 15 HSRPVVDLFYSPVTPDGFFLISASKDSSPMLRNGETGDWI 54
Score = 38.9 bits (89), Expect(2) = 6e-20
Identities = 26/76 (34%), Positives = 31/76 (40%), Gaps = 36/76 (47%)
Frame = +1
Query: 223 GRLDFTAKIWDALTGDE------------------------------------NRPDATP 294
G DF+AK+WDALTGDE NRPDA P
Sbjct: 79 GSADFSAKLWDALTGDELHSFEHKHIVRACTFSEDTHLLLTGGVEKILRIFDLNRPDAPP 138
Query: 295 REVDYLLGQLRVFLSW 342
REVD G +R ++W
Sbjct: 139 REVDNSPGSIRT-VAW 153
Score = 57.8 bits (138), Expect(2) = 3e-11
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +2
Query: 317 VNCVCFSPGGESYASGSEDGTIRIWQTGP 403
V+C+ FSPGGESYASGSEDGTIRIWQ GP
Sbjct: 221 VHCLRFSPGGESYASGSEDGTIRIWQLGP 249
Score = 36.6 bits (83), Expect(2) = 3e-11
Identities = 14/30 (46%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Frame = +3
Query: 417 HDDGE-IPANGSVGKLKIAVDEVTRKIEGF 503
HD+ + +P NG GK++++ D+V +KIEGF
Sbjct: 252 HDENDSVPGNGPTGKVEVSADDVAQKIEGF 281
>ref|XP_002285272.1| PREDICTED: serine-threonine kinase receptor-associated protein
[Vitis vinifera] gi|297743376|emb|CBI36243.3| unnamed
protein product [Vitis vinifera]
Length = 346
Score = 83.6 bits (205), Expect(2) = 1e-19
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = +2
Query: 116 NSRPVVDLFYSPVTPDGFFLISASKDSSPMLRNGETGDWI 235
+SRPVVDLFYSPVTPDGFFLISASKDS+PMLRNGETGDWI
Sbjct: 15 HSRPVVDLFYSPVTPDGFFLISASKDSTPMLRNGETGDWI 54
Score = 38.9 bits (89), Expect(2) = 1e-19
Identities = 26/76 (34%), Positives = 31/76 (40%), Gaps = 36/76 (47%)
Frame = +1
Query: 223 GRLDFTAKIWDALTGDE------------------------------------NRPDATP 294
G DFTAK+WDALTGDE NRPDA P
Sbjct: 79 GSADFTAKLWDALTGDELHSFEHKHIVRACAFSEDTHFLLTGGVEKVLRIFDLNRPDAPP 138
Query: 295 REVDYLLGQLRVFLSW 342
REV+ G +R ++W
Sbjct: 139 REVENSPGSIRT-VAW 153
Score = 63.2 bits (152), Expect = 5e-08
Identities = 31/49 (63%), Positives = 36/49 (73%)
Frame = +2
Query: 317 VNCVCFSPGGESYASGSEDGTIRIWQTGPMKYEP**WRDSSKWVSWEIK 463
V+CV FSPGGESYASGSEDGTIRIWQTGP E + +VS ++K
Sbjct: 273 VHCVRFSPGGESYASGSEDGTIRIWQTGPQNLE-----EPDSFVSGKVK 316
>ref|XP_002517562.1| serine-threonine kinase receptor-associated protein, putative
[Ricinus communis] gi|223543194|gb|EEF44726.1|
serine-threonine kinase receptor-associated protein,
putative [Ricinus communis]
Length = 336
Score = 84.7 bits (208), Expect(2) = 2e-19
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +2
Query: 116 NSRPVVDLFYSPVTPDGFFLISASKDSSPMLRNGETGDWI 235
+SRPVVDLFYSPVTPDGFFLISASKDSSPMLRNGETGDWI
Sbjct: 15 HSRPVVDLFYSPVTPDGFFLISASKDSSPMLRNGETGDWI 54
Score = 37.0 bits (84), Expect(2) = 2e-19
Identities = 25/73 (34%), Positives = 30/73 (41%), Gaps = 36/73 (49%)
Frame = +1
Query: 232 DFTAKIWDALTGDE------------------------------------NRPDATPREV 303
DFTAK+WDALTGDE NRPDA PREV
Sbjct: 82 DFTAKLWDALTGDELHSFEHRHIVRACAFSEDTHLLLTGGMEKILRLFDLNRPDAPPREV 141
Query: 304 DYLLGQLRVFLSW 342
+ G +R ++W
Sbjct: 142 NSSPGSIRT-VAW 153
Score = 61.6 bits (148), Expect = 2e-07
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = +2
Query: 317 VNCVCFSPGGESYASGSEDGTIRIWQTGPMKYE 415
V+C+ FSPGGESYASGSEDGTIRIWQTGP ++
Sbjct: 273 VHCLRFSPGGESYASGSEDGTIRIWQTGPQNHD 305