BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003994
         (1316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632482.1| PREDICTED: WD repeat-containing protein 5-li...   542   e-152
ref|XP_004143426.1| PREDICTED: WD repeat-containing protein 5-li...   529   e-148
ref|XP_003609656.1| WD repeat-containing protein [Medicago trunc...   525   e-146
ref|XP_003529576.1| PREDICTED: WD repeat-containing protein 5-li...   522   e-146
ref|XP_003550226.1| PREDICTED: WD repeat-containing protein 5-li...   518   e-144

>ref|XP_003632482.1| PREDICTED: WD repeat-containing protein 5-like [Vitis vinifera]
            gi|297735857|emb|CBI18611.3| unnamed protein product
            [Vitis vinifera]
          Length = 313

 Score =  542 bits (1396), Expect = e-152
 Identities = 256/313 (81%), Positives = 286/313 (91%)
 Frame = -3

Query: 1245 MEATESAGIKPYTLKQTLTGHKRAISSVKFSDDGNLLASSSADKTIRLYDTSSSSSFLQE 1066
            M +  S  I PY LKQTLT HKRA+S+VKFS DG LL SSSADKT+R + TS   S LQE
Sbjct: 1    MASDPSEFITPYKLKQTLTAHKRAVSAVKFSSDGLLLGSSSADKTLRTWSTSGDFSTLQE 60

Query: 1065 FQGHDGGVSDLAFSSDSRYLCSGSDDKTVRIWDIETSTLVKTLHGHTNYVFCVNYNPQSN 886
            F GHD G+SDLAFSSDSR++CS SDDKTVR+WD+ET +L+KTL GHTN+VFCVN+NPQSN
Sbjct: 61   FHGHDQGISDLAFSSDSRHVCSASDDKTVRLWDVETGSLIKTLQGHTNHVFCVNFNPQSN 120

Query: 885  MIVSGSFDETVRVWDVKSGKCLRVLPAHSDPVTSVHFNRDGSLIVSSSYDGLCRIWDAST 706
            MIVSGSFDETVRVWDVK+GKCL+VLPAHSDPVT+ +FNRDGSLIVSSSYDGLCRIWDAST
Sbjct: 121  MIVSGSFDETVRVWDVKTGKCLKVLPAHSDPVTAANFNRDGSLIVSSSYDGLCRIWDAST 180

Query: 705  GHCMKTLIDDENPPVSFVKFSPNGKFILASTLDSTMRLWNFSTGKFLKTYTGHVNSKYCI 526
            GHCMKTLIDDENPPVSFVKFSPNGKFIL  TLD+T+RLWNFSTGKFLKTYTGHVNSKYCI
Sbjct: 181  GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNFSTGKFLKTYTGHVNSKYCI 240

Query: 525  SSTFSVTNGKYIVSGSEDHHVYLWDLQSKEVIQKLEGHTDTVISVACHPSENMIASGALG 346
            SSTFSVTNGKYIV GSED+ VYLW+LQ+++++QKLEGHTDTVISV+CHPS+NMIASGALG
Sbjct: 241  SSTFSVTNGKYIVGGSEDNCVYLWELQTRKIVQKLEGHTDTVISVSCHPSQNMIASGALG 300

Query: 345  NDKTVKIWTQERD 307
            +DKTVKIWTQERD
Sbjct: 301  SDKTVKIWTQERD 313


>ref|XP_004143426.1| PREDICTED: WD repeat-containing protein 5-like [Cucumis sativus]
            gi|449531922|ref|XP_004172934.1| PREDICTED: WD
            repeat-containing protein 5-like [Cucumis sativus]
          Length = 318

 Score =  529 bits (1362), Expect = e-148
 Identities = 251/313 (80%), Positives = 285/313 (91%), Gaps = 1/313 (0%)
 Frame = -3

Query: 1248 LMEATESAGIKPYTLKQTLTGHKRAISSVKFSDDGNLLASSSADKTIRLYDTSSSS-SFL 1072
            L E +++   KPYTL QTLT HKR ISSVKFS DG LL SSSADKT+R Y  S+S+ + +
Sbjct: 2    LSEPSQTDSYKPYTLSQTLTSHKRCISSVKFSADGRLLGSSSADKTLRTYSCSNSTVTPV 61

Query: 1071 QEFQGHDGGVSDLAFSSDSRYLCSGSDDKTVRIWDIETSTLVKTLHGHTNYVFCVNYNPQ 892
            QEFQGH+ GVSDLAFSSDSR+L S SDDKT+R+WD+ T +LVKTL+GHTNYVFCVN+NPQ
Sbjct: 62   QEFQGHEQGVSDLAFSSDSRFLVSASDDKTLRLWDVSTGSLVKTLNGHTNYVFCVNFNPQ 121

Query: 891  SNMIVSGSFDETVRVWDVKSGKCLRVLPAHSDPVTSVHFNRDGSLIVSSSYDGLCRIWDA 712
            SNMIVSGSFDETVR+WDVKSGKCL+VLPAHSDPVT V FNRDGSLIVSSSYDGLCRIWDA
Sbjct: 122  SNMIVSGSFDETVRIWDVKSGKCLKVLPAHSDPVTGVDFNRDGSLIVSSSYDGLCRIWDA 181

Query: 711  STGHCMKTLIDDENPPVSFVKFSPNGKFILASTLDSTMRLWNFSTGKFLKTYTGHVNSKY 532
            STGHC+KTLIDDENPPVSFVKFSPNGKFIL  TLD+T+RLWNFSTGKFLKTYTGH NSK+
Sbjct: 182  STGHCVKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNFSTGKFLKTYTGHTNSKF 241

Query: 531  CISSTFSVTNGKYIVSGSEDHHVYLWDLQSKEVIQKLEGHTDTVISVACHPSENMIASGA 352
            CISSTFSVTNG+YI SGSED+ VYLW+LQ+++++QKLEGH+DTVISV+CHPSENMIASGA
Sbjct: 242  CISSTFSVTNGRYIASGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGA 301

Query: 351  LGNDKTVKIWTQE 313
            +GNDKTVKIWTQ+
Sbjct: 302  VGNDKTVKIWTQK 314


>ref|XP_003609656.1| WD repeat-containing protein [Medicago truncatula]
            gi|355510711|gb|AES91853.1| WD repeat-containing protein
            [Medicago truncatula]
          Length = 326

 Score =  525 bits (1351), Expect = e-146
 Identities = 247/317 (77%), Positives = 287/317 (90%), Gaps = 8/317 (2%)
 Frame = -3

Query: 1233 ESAGIKPYTLKQTLTGHKRAISSVKFSDDGNLLASSSADKTIRLY-----DTSSSS---S 1078
            +S+  KPYTL QTLTGHKRAIS+VKFS +G LLASSSADKT+R Y     D+ S+S   S
Sbjct: 10   DSSNYKPYTLSQTLTGHKRAISAVKFSSNGRLLASSSADKTLRTYGFTNSDSDSNSLTLS 69

Query: 1077 FLQEFQGHDGGVSDLAFSSDSRYLCSGSDDKTVRIWDIETSTLVKTLHGHTNYVFCVNYN 898
             +Q+++GH  GVSDLAFSSDSRYL S SDDKT+R+WD+ T +LVKTLHGHTNYVFCVN+N
Sbjct: 70   PMQQYEGHQHGVSDLAFSSDSRYLVSASDDKTIRLWDVPTGSLVKTLHGHTNYVFCVNFN 129

Query: 897  PQSNMIVSGSFDETVRVWDVKSGKCLRVLPAHSDPVTSVHFNRDGSLIVSSSYDGLCRIW 718
            PQSN+IVSGSFDETVRVWDVKSGKCL+VLPAHSDPVT+V FNRDG+LIVSSSYDGLCRIW
Sbjct: 130  PQSNVIVSGSFDETVRVWDVKSGKCLKVLPAHSDPVTAVDFNRDGTLIVSSSYDGLCRIW 189

Query: 717  DASTGHCMKTLIDDENPPVSFVKFSPNGKFILASTLDSTMRLWNFSTGKFLKTYTGHVNS 538
            DASTGHC+KTLIDDENPPVS+VKFSPN KFIL  TLD+ +RLWN+STGKFLKTYTGHVNS
Sbjct: 190  DASTGHCIKTLIDDENPPVSYVKFSPNAKFILVGTLDNNLRLWNYSTGKFLKTYTGHVNS 249

Query: 537  KYCISSTFSVTNGKYIVSGSEDHHVYLWDLQSKEVIQKLEGHTDTVISVACHPSENMIAS 358
            KYCISS+FS+TNGKY+V GSED+ +YLW LQS++++QKLEGHTD+V+SV+CHP+ENMIAS
Sbjct: 250  KYCISSSFSITNGKYVVGGSEDNCIYLWGLQSRKIVQKLEGHTDSVVSVSCHPTENMIAS 309

Query: 357  GALGNDKTVKIWTQERD 307
            GALGNDKTVKIWTQ++D
Sbjct: 310  GALGNDKTVKIWTQQKD 326


>ref|XP_003529576.1| PREDICTED: WD repeat-containing protein 5-like [Glycine max]
          Length = 329

 Score =  522 bits (1344), Expect = e-146
 Identities = 247/321 (76%), Positives = 287/321 (89%), Gaps = 9/321 (2%)
 Frame = -3

Query: 1242 EATESAGIKP-YTLKQTLTGHKRAISSVKFSDDGNLLASSSADKTIRLYDTSSSSSF--- 1075
            E+ +S  +KP Y L QTL+GHKRAIS+VKFS +G LLASS+ADKT+R Y  ++S S    
Sbjct: 9    ESLDSDSMKPNYILSQTLSGHKRAISAVKFSSNGRLLASSAADKTLRTYGFTNSDSDSDS 68

Query: 1074 -----LQEFQGHDGGVSDLAFSSDSRYLCSGSDDKTVRIWDIETSTLVKTLHGHTNYVFC 910
                 +QE++GH+ GVSDLAFSSDSR+L S SDDKT+R+WD+ T +L+KTLHGHTNYVFC
Sbjct: 69   LTLSPMQEYEGHEQGVSDLAFSSDSRFLVSASDDKTLRLWDVPTGSLIKTLHGHTNYVFC 128

Query: 909  VNYNPQSNMIVSGSFDETVRVWDVKSGKCLRVLPAHSDPVTSVHFNRDGSLIVSSSYDGL 730
            VN+NPQSN+IVSGSFDETVRVWDVKSGKCL+VLPAHSDPVT+V FNRDGSLIVSSSYDGL
Sbjct: 129  VNFNPQSNIIVSGSFDETVRVWDVKSGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGL 188

Query: 729  CRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILASTLDSTMRLWNFSTGKFLKTYTG 550
            CRIWDASTGHCMKTLIDDENPPVSFVKFSPN KFIL  TLD+T+RLWN+STGKFLKTYTG
Sbjct: 189  CRIWDASTGHCMKTLIDDENPPVSFVKFSPNAKFILVGTLDNTLRLWNYSTGKFLKTYTG 248

Query: 549  HVNSKYCISSTFSVTNGKYIVSGSEDHHVYLWDLQSKEVIQKLEGHTDTVISVACHPSEN 370
            HVNSKYCISSTFS+TNGKYIV GSED+ +YLWDLQS++++QKLEGH+D V+SV+CHP+EN
Sbjct: 249  HVNSKYCISSTFSITNGKYIVGGSEDNCIYLWDLQSRKIVQKLEGHSDAVVSVSCHPTEN 308

Query: 369  MIASGALGNDKTVKIWTQERD 307
            MIASGALGND TVKIWTQ++D
Sbjct: 309  MIASGALGNDNTVKIWTQQKD 329


>ref|XP_003550226.1| PREDICTED: WD repeat-containing protein 5-like [Glycine max]
          Length = 314

 Score =  518 bits (1333), Expect = e-144
 Identities = 243/314 (77%), Positives = 284/314 (90%), Gaps = 9/314 (2%)
 Frame = -3

Query: 1221 IKP-YTLKQTLTGHKRAISSVKFSDDGNLLASSSADKTIRLYDTSSSSSF--------LQ 1069
            +KP YTL QTL+GHKRAIS+VKFS +G LLASS+ADKT+R Y  ++S S         +Q
Sbjct: 1    MKPNYTLSQTLSGHKRAISAVKFSSNGRLLASSAADKTLRTYGFTNSDSDSESLTLSPMQ 60

Query: 1068 EFQGHDGGVSDLAFSSDSRYLCSGSDDKTVRIWDIETSTLVKTLHGHTNYVFCVNYNPQS 889
            +++GH+ GVSDLAFSSDSR+L S SDDKT+R+WD+ T +L+KTLHGHTNYVFCVN+NPQS
Sbjct: 61   QYEGHEQGVSDLAFSSDSRFLVSASDDKTLRLWDVPTGSLIKTLHGHTNYVFCVNFNPQS 120

Query: 888  NMIVSGSFDETVRVWDVKSGKCLRVLPAHSDPVTSVHFNRDGSLIVSSSYDGLCRIWDAS 709
            N+IVSGSFDETVRVWDVKSGKCL+VLPAHSDPVT+V FNRDGSLIVSSSYDGLCRIWDAS
Sbjct: 121  NIIVSGSFDETVRVWDVKSGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDAS 180

Query: 708  TGHCMKTLIDDENPPVSFVKFSPNGKFILASTLDSTMRLWNFSTGKFLKTYTGHVNSKYC 529
            TGHCMKTLIDD+NPPVSFVKFSPN KFIL  TLD+T+RLWN+STGKFLKTYTGHVNSKYC
Sbjct: 181  TGHCMKTLIDDDNPPVSFVKFSPNAKFILVGTLDNTLRLWNYSTGKFLKTYTGHVNSKYC 240

Query: 528  ISSTFSVTNGKYIVSGSEDHHVYLWDLQSKEVIQKLEGHTDTVISVACHPSENMIASGAL 349
            ISSTFS TNGKYIV GSE++++YLWDLQS++++QKLEGH+D V+SV+CHP+ENMIASGAL
Sbjct: 241  ISSTFSTTNGKYIVGGSEENYIYLWDLQSRKIVQKLEGHSDAVVSVSCHPTENMIASGAL 300

Query: 348  GNDKTVKIWTQERD 307
            GND TVKIWTQ++D
Sbjct: 301  GNDNTVKIWTQQKD 314