BLASTX nr result

ID: Coptis24_contig00003983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003983
         (643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30188.3| unnamed protein product [Vitis vinifera]               90   4e-16
ref|XP_002264975.2| PREDICTED: uncharacterized protein LOC100248...    82   7e-14
emb|CAN83583.1| hypothetical protein VITISV_009664 [Vitis vinifera]    80   4e-13
ref|XP_002519423.1| ATSMC2, putative [Ricinus communis] gi|22354...    79   7e-13
ref|XP_004161275.1| PREDICTED: uncharacterized protein LOC101231...    79   1e-12

>emb|CBI30188.3| unnamed protein product [Vitis vinifera]
          Length = 1369

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 54/129 (41%), Positives = 74/129 (57%), Gaps = 17/129 (13%)
 Frame = +2

Query: 89   QYQEEVNGNDNHLDCNG-GTGVDIVMKIHXXXXXXXXXXXXXXMYKAQLKKFLADAQNGY 265
            Q+Q+E +  +   D N    GVD V K+                YK QLK+ L+D + G 
Sbjct: 1242 QHQQEGDEKNGLQDKNSHAVGVDPVSKVQLLENELAEALEANKKYKVQLKR-LSDGRKGP 1300

Query: 266  ANGPKKL----------------SSVEAELKDIRERYFHMSLKFAEVEAEREDLVMQIKT 397
            A+  +K                 SS+E+EL+DIRERYFHMSLK+AEVEA+RE+LVM++K 
Sbjct: 1301 ADSSRKSTADGEVVPKERYERTKSSLESELRDIRERYFHMSLKYAEVEAQREELVMKLKV 1360

Query: 398  LRNGRRWFS 424
             +NG+RWFS
Sbjct: 1361 TKNGKRWFS 1369


>ref|XP_002264975.2| PREDICTED: uncharacterized protein LOC100248757 [Vitis vinifera]
          Length = 2411

 Score = 82.4 bits (202), Expect = 7e-14
 Identities = 51/120 (42%), Positives = 70/120 (58%), Gaps = 9/120 (7%)
 Frame = +2

Query: 89   QYQEEVNGNDNHLDCNG-GTGVDIVMKIHXXXXXXXXXXXXXXMYKAQLKKFLADAQNGY 265
            Q+Q+E +  +   D N    GVD V K+                YK QLK     ++   
Sbjct: 1405 QHQQEGDEKNGLQDKNSHAVGVDPVSKVQLLENELAEALEANKKYKVQLKSPADSSRKST 1464

Query: 266  ANG---PKKL-----SSVEAELKDIRERYFHMSLKFAEVEAEREDLVMQIKTLRNGRRWF 421
            A+G   PK+      SS+E+EL+DIRERYFHMSLK+AEVEA+RE+LVM++K  +NG+R F
Sbjct: 1465 ADGEVVPKERYERTKSSLESELRDIRERYFHMSLKYAEVEAQREELVMKLKVTKNGKRCF 1524


>emb|CAN83583.1| hypothetical protein VITISV_009664 [Vitis vinifera]
          Length = 2427

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 50/125 (40%), Positives = 70/125 (56%), Gaps = 17/125 (13%)
 Frame = +2

Query: 89   QYQEEVNGNDNHLDCNG-GTGVDIVMKIHXXXXXXXXXXXXXXMYKAQLKKFLADAQNGY 265
            Q+Q+E +  +   D N    GVD V K+                YK QLK+ L+D + G 
Sbjct: 1453 QHQQEGDEKNGLQDKNSHAVGVDPVSKVQLLENELAEALEANKKYKVQLKR-LSDGRKGP 1511

Query: 266  ANGPKKL----------------SSVEAELKDIRERYFHMSLKFAEVEAEREDLVMQIKT 397
            A+  +K                 SS+E+EL+DIRERYFHMSLK+AEVEA+RE+LVM++K 
Sbjct: 1512 ADSSRKSTADGEVVPKERYERTKSSLESELRDIRERYFHMSLKYAEVEAQREELVMKLKV 1571

Query: 398  LRNGR 412
             +NG+
Sbjct: 1572 TKNGK 1576


>ref|XP_002519423.1| ATSMC2, putative [Ricinus communis] gi|223541286|gb|EEF42837.1|
            ATSMC2, putative [Ricinus communis]
          Length = 1306

 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 36/58 (62%), Positives = 46/58 (79%)
 Frame = +2

Query: 248  DAQNGYANGPKKLSSVEAELKDIRERYFHMSLKFAEVEAEREDLVMQIKTLRNGRRWF 421
            +  NGY    K+L+S EAEL+DIRERYFHMSLK+AEVE ERE+LVM++K   +G+ WF
Sbjct: 1249 EVNNGYKPQVKRLTSEEAELRDIRERYFHMSLKYAEVEEEREELVMKLKAANSGKGWF 1306


>ref|XP_004161275.1| PREDICTED: uncharacterized protein LOC101231969 [Cucumis sativus]
          Length = 1265

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 17/154 (11%)
 Frame = +2

Query: 14   HSEKEMERNINAVNGRLSTKIEEKVQYQEEVNGNDNHLDCNGGTGVDIVMKIHXXXXXXX 193
            HS K+  ++ N      S + + +++Y+++ +G D   +         + +I        
Sbjct: 1118 HSGKKKPKDPN------SNQSQSQIKYRQDDSGCDIDDEGPHVPEAKSISRIQMLEKELA 1171

Query: 194  XXXXXXXMYKAQLKKFLADAQNGYANGPKKL----------------SSVEAELKDIRER 325
                    Y+ QL + ++D QN   N P                   S +EAELKDIRER
Sbjct: 1172 EALEANKKYEDQLSRIVSDTQNNKENSPISTIEGDVVKTKEGYESLNSDLEAELKDIRER 1231

Query: 326  YFHMSLKFAEVEAEREDLVMQIKTLRN-GRRWFS 424
            YFH+SLK+AEVE +RE+LVM++K  +N GRRWFS
Sbjct: 1232 YFHISLKYAEVEHQREELVMKLKAAKNSGRRWFS 1265


Top