BLASTX nr result

ID: Coptis24_contig00003972 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003972
         (756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38752.3| unnamed protein product [Vitis vinifera]              256   e-105
ref|XP_002270528.2| PREDICTED: light-mediated development protei...   256   e-105
ref|XP_003517544.1| PREDICTED: light-mediated development protei...   230   4e-98
ref|XP_003517543.1| PREDICTED: light-mediated development protei...   230   4e-98
gb|AFK44113.1| unknown [Medicago truncatula]                          228   4e-97

>emb|CBI38752.3| unnamed protein product [Vitis vinifera]
          Length = 531

 Score =  256 bits (655), Expect(2) = e-105
 Identities = 121/146 (82%), Positives = 131/146 (89%)
 Frame = +2

Query: 2   NNIVTRIFERQIRTPAPSTSVNCTRRFYENLVPDCTIYNVDCPDHSFRKFTDDGQYLISF 181
           NN+V RIF+RQI TPAP TSV+C RRFYENLVP CTIY+V+CPDHSFRKFTDDGQYLISF
Sbjct: 5   NNVVARIFQRQICTPAPGTSVHCARRFYENLVPSCTIYDVECPDHSFRKFTDDGQYLISF 64

Query: 182 SRNHQDLIVYRLTWPSFSCKEEHSDFLDLPPKAKRFESFFTQLYCVSLASSNEFICKDFF 361
           SRN+QDLIVYR TW SFSCKEE  D  DLP KAKRFESFFTQLYCVSLASSNEFICKDFF
Sbjct: 65  SRNNQDLIVYRPTWLSFSCKEEDCDSYDLPLKAKRFESFFTQLYCVSLASSNEFICKDFF 124

Query: 362 LYLETKQFGLFATQTAQVYDAPATDG 439
           LY+E+ QFGLFAT TAQ++DAPAT G
Sbjct: 125 LYMESNQFGLFATSTAQIHDAPATGG 150



 Score =  153 bits (386), Expect(2) = e-105
 Identities = 74/90 (82%), Positives = 83/90 (92%)
 Frame = +1

Query: 487 GIPSIEKITFHLVRLEDGITLDEKVFSNDFVNLGHNMGVFLYDDLLAIMSLRYQTIHILQ 666
           GIPSIEKITFHL+RLEDG  LDE+VF NDFVNL H+MGVFLYDDLLAI+SLRYQTIHILQ
Sbjct: 154 GIPSIEKITFHLLRLEDGFRLDERVFHNDFVNLTHSMGVFLYDDLLAIVSLRYQTIHILQ 213

Query: 667 IRDAGNLVDVQVIGAVCREDDKLFLSSHAQ 756
           IRD+GNLVDV+ IG  CREDD+LFL+S+AQ
Sbjct: 214 IRDSGNLVDVRAIGTFCREDDELFLNSNAQ 243


>ref|XP_002270528.2| PREDICTED: light-mediated development protein DET1-like [Vitis
           vinifera]
          Length = 510

 Score =  256 bits (655), Expect(2) = e-105
 Identities = 121/146 (82%), Positives = 131/146 (89%)
 Frame = +2

Query: 2   NNIVTRIFERQIRTPAPSTSVNCTRRFYENLVPDCTIYNVDCPDHSFRKFTDDGQYLISF 181
           NN+V RIF+RQI TPAP TSV+C RRFYENLVP CTIY+V+CPDHSFRKFTDDGQYLISF
Sbjct: 5   NNVVARIFQRQICTPAPGTSVHCARRFYENLVPSCTIYDVECPDHSFRKFTDDGQYLISF 64

Query: 182 SRNHQDLIVYRLTWPSFSCKEEHSDFLDLPPKAKRFESFFTQLYCVSLASSNEFICKDFF 361
           SRN+QDLIVYR TW SFSCKEE  D  DLP KAKRFESFFTQLYCVSLASSNEFICKDFF
Sbjct: 65  SRNNQDLIVYRPTWLSFSCKEEDCDSYDLPLKAKRFESFFTQLYCVSLASSNEFICKDFF 124

Query: 362 LYLETKQFGLFATQTAQVYDAPATDG 439
           LY+E+ QFGLFAT TAQ++DAPAT G
Sbjct: 125 LYMESNQFGLFATSTAQIHDAPATGG 150



 Score =  153 bits (386), Expect(2) = e-105
 Identities = 74/90 (82%), Positives = 83/90 (92%)
 Frame = +1

Query: 487 GIPSIEKITFHLVRLEDGITLDEKVFSNDFVNLGHNMGVFLYDDLLAIMSLRYQTIHILQ 666
           GIPSIEKITFHL+RLEDG  LDE+VF NDFVNL H+MGVFLYDDLLAI+SLRYQTIHILQ
Sbjct: 154 GIPSIEKITFHLLRLEDGFRLDERVFHNDFVNLTHSMGVFLYDDLLAIVSLRYQTIHILQ 213

Query: 667 IRDAGNLVDVQVIGAVCREDDKLFLSSHAQ 756
           IRD+GNLVDV+ IG  CREDD+LFL+S+AQ
Sbjct: 214 IRDSGNLVDVRAIGTFCREDDELFLNSNAQ 243


>ref|XP_003517544.1| PREDICTED: light-mediated development protein DET1-like isoform 2
           [Glycine max]
          Length = 536

 Score =  230 bits (586), Expect(2) = 4e-98
 Identities = 108/146 (73%), Positives = 123/146 (84%)
 Frame = +2

Query: 2   NNIVTRIFERQIRTPAPSTSVNCTRRFYENLVPDCTIYNVDCPDHSFRKFTDDGQYLISF 181
           +NIV R+F+RQI TPAP TSV+  RRFYENLVP  T+Y V+CPDHSFRKFTDDGQYLISF
Sbjct: 5   SNIVARVFDRQICTPAPGTSVHHARRFYENLVPSHTVYEVECPDHSFRKFTDDGQYLISF 64

Query: 182 SRNHQDLIVYRLTWPSFSCKEEHSDFLDLPPKAKRFESFFTQLYCVSLASSNEFICKDFF 361
           SRNHQ+LIVYR  W SFSCK+E  D  DLP +AKRF+SFF+QLYCV LAS NE ICKDFF
Sbjct: 65  SRNHQELIVYRPRWLSFSCKDEDCDKHDLPSRAKRFDSFFSQLYCVPLASCNELICKDFF 124

Query: 362 LYLETKQFGLFATQTAQVYDAPATDG 439
           LY+E+ QFGLFAT TAQ++DAPA  G
Sbjct: 125 LYMESNQFGLFATSTAQIHDAPAVGG 150



 Score =  154 bits (390), Expect(2) = 4e-98
 Identities = 75/90 (83%), Positives = 84/90 (93%)
 Frame = +1

Query: 487 GIPSIEKITFHLVRLEDGITLDEKVFSNDFVNLGHNMGVFLYDDLLAIMSLRYQTIHILQ 666
           G+PSIEKITFHL+RLEDG  LD+KVFSNDFVNL HNMGVFLYDDLLAI+SLRYQTIHILQ
Sbjct: 154 GVPSIEKITFHLLRLEDGEILDKKVFSNDFVNLTHNMGVFLYDDLLAIVSLRYQTIHILQ 213

Query: 667 IRDAGNLVDVQVIGAVCREDDKLFLSSHAQ 756
           IRD+GNLVDV+ IG  CREDD+LFL+S+AQ
Sbjct: 214 IRDSGNLVDVRAIGEFCREDDELFLNSNAQ 243


>ref|XP_003517543.1| PREDICTED: light-mediated development protein DET1-like isoform 1
           [Glycine max]
          Length = 526

 Score =  230 bits (586), Expect(2) = 4e-98
 Identities = 108/146 (73%), Positives = 123/146 (84%)
 Frame = +2

Query: 2   NNIVTRIFERQIRTPAPSTSVNCTRRFYENLVPDCTIYNVDCPDHSFRKFTDDGQYLISF 181
           +NIV R+F+RQI TPAP TSV+  RRFYENLVP  T+Y V+CPDHSFRKFTDDGQYLISF
Sbjct: 5   SNIVARVFDRQICTPAPGTSVHHARRFYENLVPSHTVYEVECPDHSFRKFTDDGQYLISF 64

Query: 182 SRNHQDLIVYRLTWPSFSCKEEHSDFLDLPPKAKRFESFFTQLYCVSLASSNEFICKDFF 361
           SRNHQ+LIVYR  W SFSCK+E  D  DLP +AKRF+SFF+QLYCV LAS NE ICKDFF
Sbjct: 65  SRNHQELIVYRPRWLSFSCKDEDCDKHDLPSRAKRFDSFFSQLYCVPLASCNELICKDFF 124

Query: 362 LYLETKQFGLFATQTAQVYDAPATDG 439
           LY+E+ QFGLFAT TAQ++DAPA  G
Sbjct: 125 LYMESNQFGLFATSTAQIHDAPAVGG 150



 Score =  154 bits (390), Expect(2) = 4e-98
 Identities = 75/90 (83%), Positives = 84/90 (93%)
 Frame = +1

Query: 487 GIPSIEKITFHLVRLEDGITLDEKVFSNDFVNLGHNMGVFLYDDLLAIMSLRYQTIHILQ 666
           G+PSIEKITFHL+RLEDG  LD+KVFSNDFVNL HNMGVFLYDDLLAI+SLRYQTIHILQ
Sbjct: 154 GVPSIEKITFHLLRLEDGEILDKKVFSNDFVNLTHNMGVFLYDDLLAIVSLRYQTIHILQ 213

Query: 667 IRDAGNLVDVQVIGAVCREDDKLFLSSHAQ 756
           IRD+GNLVDV+ IG  CREDD+LFL+S+AQ
Sbjct: 214 IRDSGNLVDVRAIGEFCREDDELFLNSNAQ 243


>gb|AFK44113.1| unknown [Medicago truncatula]
          Length = 587

 Score =  228 bits (580), Expect(2) = 4e-97
 Identities = 108/146 (73%), Positives = 121/146 (82%)
 Frame = +2

Query: 2   NNIVTRIFERQIRTPAPSTSVNCTRRFYENLVPDCTIYNVDCPDHSFRKFTDDGQYLISF 181
           +NI  RIF+RQI TPAP TSV+  RRFYENLVP  TIY V+CPDHSFRKFT+DGQYLISF
Sbjct: 73  SNIAARIFDRQICTPAPGTSVHHARRFYENLVPSYTIYEVECPDHSFRKFTEDGQYLISF 132

Query: 182 SRNHQDLIVYRLTWPSFSCKEEHSDFLDLPPKAKRFESFFTQLYCVSLASSNEFICKDFF 361
           SRNHQ+LIVYR  W SFSC +E  D  DLP KA+RF+SFFTQLYCV LAS NE ICKDFF
Sbjct: 133 SRNHQELIVYRPRWLSFSCNDEDCDQHDLPSKARRFDSFFTQLYCVPLASCNELICKDFF 192

Query: 362 LYLETKQFGLFATQTAQVYDAPATDG 439
           LY+E+ QFGLFAT TAQ++DAPA  G
Sbjct: 193 LYMESNQFGLFATSTAQIHDAPAVGG 218



 Score =  154 bits (388), Expect(2) = 4e-97
 Identities = 74/90 (82%), Positives = 84/90 (93%)
 Frame = +1

Query: 487 GIPSIEKITFHLVRLEDGITLDEKVFSNDFVNLGHNMGVFLYDDLLAIMSLRYQTIHILQ 666
           G+PSIEKITFHL+R+EDG  LD+KVFSNDFVNL HNMGVFLYDDLLAI+SLRYQTIHILQ
Sbjct: 222 GVPSIEKITFHLLRMEDGEILDKKVFSNDFVNLTHNMGVFLYDDLLAIVSLRYQTIHILQ 281

Query: 667 IRDAGNLVDVQVIGAVCREDDKLFLSSHAQ 756
           IRD+GNLVDV+ IG  CREDD+LFL+S+AQ
Sbjct: 282 IRDSGNLVDVRAIGEFCREDDELFLNSNAQ 311


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