BLASTX nr result

ID: Coptis24_contig00003970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003970
         (1456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315001.1| predicted protein [Populus trichocarpa] gi|2...   163   1e-37
emb|CBI21211.3| unnamed protein product [Vitis vinifera]              142   3e-31
ref|XP_002277117.1| PREDICTED: ninja-family protein AFP2-like [V...   142   3e-31
emb|CAN77669.1| hypothetical protein VITISV_038107 [Vitis vinifera]   142   3e-31
ref|XP_002527618.1| hypothetical protein RCOM_1025320 [Ricinus c...   125   4e-26

>ref|XP_002315001.1| predicted protein [Populus trichocarpa] gi|222864041|gb|EEF01172.1|
            predicted protein [Populus trichocarpa]
          Length = 335

 Score =  163 bits (412), Expect = 1e-37
 Identities = 120/322 (37%), Positives = 158/322 (49%), Gaps = 23/322 (7%)
 Frame = +3

Query: 234  NECMRDLLQRF-----SEKRHAFVETPEKEEVELNLGLSLGGCFGVEPNEKTSLLRSSSN 398
            N   RDL+QR       + + A  E  E EE+ELNLGLSLGG FGV+   +  L RSSS 
Sbjct: 9    NRYPRDLVQRLISSDAQQYKTATSEGEEAEEIELNLGLSLGGRFGVDKTSE-KLTRSSSI 67

Query: 399  ACYTTSGFREDGLFS-------LTRTSSLPVENEVETRKRKGLETVRHMVGMKKRSEKER 557
            A         D L +       L RTSSLP E E E RKRK  +++R M   ++RSEK++
Sbjct: 68   AGSIPLLRDHDALSTPPVSYPFLIRTSSLPTETEEEWRKRKENQSLRRMEAKRRRSEKQK 127

Query: 558  CSR-----DENDVKSESLIPLGPVHWCFGSQGMEDXXXXXXXXXXXXXXXXXXXXXXXXX 722
              R     +E  +   + +P     W     G+ +                         
Sbjct: 128  NLRGELNLEEVKLNKGNWVPT----WANKQSGVVNRSSNLEGQQQQQGSRGSVESLGGSS 183

Query: 723  XXXXXXXXXXXXXXXT-----SPASVLSLPEQSEHKPTLVPCSKPIQKSDTSGVTAKTPL 887
                           +     SPAS  SL E+S  +      +K I+ +  +  T    L
Sbjct: 184  SGLSEMESKPVQGSSSGGEARSPASNQSLQERSSQEAVGSSGTKKIENACRASRTEPENL 243

Query: 888  DKHKVMNSCR-MESEMKVMQEMPCVFTKGDGPNGKRIEGLLYQYRSGKEVRIVCVCHGSC 1064
             K       R  E     M++MPCVFTKGDGPNG+R++G+LY+Y  G+EVRI+CVCHGS 
Sbjct: 244  SKKLDSAENRGREIGTNAMEDMPCVFTKGDGPNGRRVDGILYKYGKGEEVRIMCVCHGSF 303

Query: 1065 LTPAEFVKHAGGNDVTHPLRHI 1130
             +PAEFVKHAGG+DV HPLRHI
Sbjct: 304  HSPAEFVKHAGGSDVDHPLRHI 325


>emb|CBI21211.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  142 bits (357), Expect = 3e-31
 Identities = 68/120 (56%), Positives = 85/120 (70%)
 Frame = +3

Query: 771  SPASVLSLPEQSEHKPTLVPCSKPIQKSDTSGVTAKTPLDKHKVMNSCRMESEMKVMQEM 950
            SPAS+ SLP QSE KP + P   P +     GV A+    K  + +    E   KVM++M
Sbjct: 571  SPASIQSLPGQSEQKPLISP-GTPEKSGKVGGVVAENQPKKPTISSRGVSEMARKVMEDM 629

Query: 951  PCVFTKGDGPNGKRIEGLLYQYRSGKEVRIVCVCHGSCLTPAEFVKHAGGNDVTHPLRHI 1130
            PCV T GDGPNGK+++G LY+Y+ G+EVRIVCVCHG+ L+PAEFVKHAGG+DV HPLRHI
Sbjct: 630  PCVSTTGDGPNGKKVDGFLYRYKKGEEVRIVCVCHGTFLSPAEFVKHAGGSDVAHPLRHI 689


>ref|XP_002277117.1| PREDICTED: ninja-family protein AFP2-like [Vitis vinifera]
          Length = 367

 Score =  142 bits (357), Expect = 3e-31
 Identities = 68/120 (56%), Positives = 85/120 (70%)
 Frame = +3

Query: 771  SPASVLSLPEQSEHKPTLVPCSKPIQKSDTSGVTAKTPLDKHKVMNSCRMESEMKVMQEM 950
            SPAS+ SLP QSE KP + P   P +     GV A+    K  + +    E   KVM++M
Sbjct: 241  SPASIQSLPGQSEQKPLISP-GTPEKSGKVGGVVAENQPKKPTISSRGVSEMARKVMEDM 299

Query: 951  PCVFTKGDGPNGKRIEGLLYQYRSGKEVRIVCVCHGSCLTPAEFVKHAGGNDVTHPLRHI 1130
            PCV T GDGPNGK+++G LY+Y+ G+EVRIVCVCHG+ L+PAEFVKHAGG+DV HPLRHI
Sbjct: 300  PCVSTTGDGPNGKKVDGFLYRYKKGEEVRIVCVCHGTFLSPAEFVKHAGGSDVAHPLRHI 359



 Score = 72.4 bits (176), Expect = 3e-10
 Identities = 47/114 (41%), Positives = 66/114 (57%), Gaps = 11/114 (9%)
 Frame = +3

Query: 249 DLLQR-----FSEKRHAFVETPEKEEVELNLGLSLGGCFGVEPNEKTSLLRSSSNACYTT 413
           DLLQR        ++     + E  E+EL+LGLSL G FGV+P +   L RSSS + + T
Sbjct: 7   DLLQRVIAGNLFPRKFEEAASEETGEIELSLGLSLNGRFGVDPKKAKMLTRSSSISDFMT 66

Query: 414 SGFREDG------LFSLTRTSSLPVENEVETRKRKGLETVRHMVGMKKRSEKER 557
               +D       + +LTRT SLP+E E E RKRK L+T+R +   +KR+ K+R
Sbjct: 67  PLRYQDRASTVLPITALTRTCSLPMETEEEWRKRKELQTLRRLEAKRKRTAKQR 120


>emb|CAN77669.1| hypothetical protein VITISV_038107 [Vitis vinifera]
          Length = 1100

 Score =  142 bits (357), Expect = 3e-31
 Identities = 68/120 (56%), Positives = 85/120 (70%)
 Frame = +3

Query: 771  SPASVLSLPEQSEHKPTLVPCSKPIQKSDTSGVTAKTPLDKHKVMNSCRMESEMKVMQEM 950
            SPAS+ SLP QSE KP + P   P +     GV A+    K  + +    E   KVM++M
Sbjct: 974  SPASIQSLPGQSEQKPLISP-GTPEKSGKVGGVVAENQPKKPTISSRGVSEMARKVMEDM 1032

Query: 951  PCVFTKGDGPNGKRIEGLLYQYRSGKEVRIVCVCHGSCLTPAEFVKHAGGNDVTHPLRHI 1130
            PCV T GDGPNGK+++G LY+Y+ G+EVRIVCVCHG+ L+PAEFVKHAGG+DV HPLRHI
Sbjct: 1033 PCVSTTGDGPNGKKVDGFLYRYKKGEEVRIVCVCHGTFLSPAEFVKHAGGSDVAHPLRHI 1092



 Score = 72.4 bits (176), Expect = 3e-10
 Identities = 47/114 (41%), Positives = 66/114 (57%), Gaps = 11/114 (9%)
 Frame = +3

Query: 249  DLLQR-----FSEKRHAFVETPEKEEVELNLGLSLGGCFGVEPNEKTSLLRSSSNACYTT 413
            DLLQR        ++     + E  E+EL+LGLSL G FGV+P +   L RSSS + + T
Sbjct: 740  DLLQRVIAGNLFPRKFEEAASEETGEIELSLGLSLNGRFGVDPKKAKMLTRSSSISDFMT 799

Query: 414  SGFREDG------LFSLTRTSSLPVENEVETRKRKGLETVRHMVGMKKRSEKER 557
                +D       + +LTRT SLP+E E E RKRK L+T+R +   +KR+ K+R
Sbjct: 800  PLRYQDRASTVLPITALTRTCSLPMETEEEWRKRKELQTLRRLEAKRKRTAKQR 853


>ref|XP_002527618.1| hypothetical protein RCOM_1025320 [Ricinus communis]
            gi|223532992|gb|EEF34757.1| hypothetical protein
            RCOM_1025320 [Ricinus communis]
          Length = 133

 Score =  125 bits (313), Expect = 4e-26
 Identities = 66/128 (51%), Positives = 82/128 (64%), Gaps = 8/128 (6%)
 Frame = +3

Query: 771  SPASVLSLPEQSEHKPTLVPCSKPIQKSDTSGVTAKTPL--------DKHKVMNSCRMES 926
            SP SV SL E          C + ++ +  S +  K+ +        D+ +V N    E 
Sbjct: 9    SPVSVQSLSE----------CEQKLRVTSKSTINGKSGVAMEDSSRCDEARVRNGAE-EM 57

Query: 927  EMKVMQEMPCVFTKGDGPNGKRIEGLLYQYRSGKEVRIVCVCHGSCLTPAEFVKHAGGND 1106
               V+++MPCV TKGDGPNGKRIEG LY+YR G+EVRIVCVCHGS L+PAEFVKHAGG D
Sbjct: 58   GRNVLEDMPCVSTKGDGPNGKRIEGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGD 117

Query: 1107 VTHPLRHI 1130
            V HPL+HI
Sbjct: 118  VAHPLKHI 125


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