BLASTX nr result

ID: Coptis24_contig00003958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003958
         (780 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81149.1| hypothetical protein VITISV_020815 [Vitis vinifera]   101   2e-19
emb|CBI26021.3| unnamed protein product [Vitis vinifera]               99   1e-18
dbj|BAC83334.1| hypothetical protein [Oryza sativa Japonica Grou...    79   1e-12
ref|XP_002440463.1| hypothetical protein SORBIDRAFT_09g001380 [S...    79   1e-12
ref|XP_002449594.1| hypothetical protein SORBIDRAFT_05g019760 [S...    78   2e-12

>emb|CAN81149.1| hypothetical protein VITISV_020815 [Vitis vinifera]
          Length = 1789

 Score =  101 bits (251), Expect = 2e-19
 Identities = 81/240 (33%), Positives = 118/240 (49%), Gaps = 10/240 (4%)
 Frame = +3

Query: 54   KDFSHHIDQWIKMALAKRCQNPNIGLSHLVILRKIHRDG------DLYSQSPC-LFSTQE 212
            K+F  HIDQWI  A+ K  +N ++ LS       + RD        +Y + PC LFS   
Sbjct: 1421 KEFMSHIDQWITCAVMKGVENIDLDLSEYFSF-NLKRDDTSSTAFQIY-EFPCRLFSVPG 1478

Query: 213  MGSSVKCLSLKGCSFRSL-GSNGYSSXXXXXXXXXXXXXXXXXSILSNSYNLEKLCLREC 389
               ++K L L  C   +L  SN  +S                  +LS   +LE+L L  C
Sbjct: 1479 GRCTLKHLRLASCHLSALPSSNTLTSLITVDLQRVNISDQQLQDLLSTCSHLERLSLCVC 1538

Query: 390  KGLLSLKVSGPSLKLKHLSVLFCPELKEITIDAENLTIFLYMGKCVKFLPINVPQLSNVS 569
             GL++L  S  +L+LK LS+  C  L+ I I A +L  F Y G    F   NVP+L+  S
Sbjct: 1539 NGLVNLSFSALNLQLKFLSIKNCFRLETIEIHAADLVTFKYGGHLPSFSFKNVPKLAKAS 1598

Query: 570  LRTEIDNSR-EALSYARGKLSSDFPHLKSL-ILSVEPVEEKNIPKQLPLFANLKKLVLLV 743
            L   I +SR E + YA  +   D P L++L +LSV  +++  +P+  P F N+K+  L V
Sbjct: 1599 LEFFIKSSRTEGVMYALTRFPQDLPQLETLKLLSVLTLKKLQLPENGPTFTNIKQFELTV 1658


>emb|CBI26021.3| unnamed protein product [Vitis vinifera]
          Length = 487

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 81/240 (33%), Positives = 117/240 (48%), Gaps = 10/240 (4%)
 Frame = +3

Query: 54  KDFSHHIDQWIKMALAKRCQNPNIGLSHLVILRKIHRDG------DLYSQSPC-LFSTQE 212
           K+F  HIDQWI  A+ K  +N ++ LS       + RD        +Y + PC LFS   
Sbjct: 119 KEFMSHIDQWITCAVMKGVENIDLDLSEYFSF-NLKRDDTSSTAFQIY-EFPCRLFSVPG 176

Query: 213 MGSSVKCLSLKGCSFRSL-GSNGYSSXXXXXXXXXXXXXXXXXSILSNSYNLEKLCLREC 389
              ++K L L  C   +L  SN  +S                  +LS   +LE L L  C
Sbjct: 177 GRCTLKHLRLASCHLSALPSSNTLTSLITVDLQRVNISDQQLQDLLSTCSHLEWLSLCVC 236

Query: 390 KGLLSLKVSGPSLKLKHLSVLFCPELKEITIDAENLTIFLYMGKCVKFLPINVPQLSNVS 569
            GL++L  S  +L+LK LS+  C  L+ I I A +L  F Y G    F   NVP+L+  S
Sbjct: 237 NGLVNLSFSALNLQLKFLSIKNCFRLETIEIHAADLVTFKYGGHLPSFSFKNVPKLAKAS 296

Query: 570 LRTEIDNSR-EALSYARGKLSSDFPHLKSL-ILSVEPVEEKNIPKQLPLFANLKKLVLLV 743
           L   I +SR E + YA  +   D P L++L +LSV  +++  +P+  P F N+K+  L V
Sbjct: 297 LEFFIKSSRTEGVMYALTRFPQDLPQLETLKLLSVLTLKKLQLPENGPTFTNVKQFELTV 356


>dbj|BAC83334.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|125600679|gb|EAZ40255.1| hypothetical protein
           OsJ_24698 [Oryza sativa Japonica Group]
          Length = 534

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 64/230 (27%), Positives = 101/230 (43%), Gaps = 4/230 (1%)
 Frame = +3

Query: 60  FSHHIDQWIKMALAKRCQNPNIGLSHLVILRKIHRDGDLYSQSPCLFSTQEMGSSVKCLS 239
           +++ ID+ I +A+ +  ++ N  L   +      R      + P        G SV  L 
Sbjct: 172 YANLIDKLISIAICRGVEHLN--LETYLYSANDQRPSPAPYKFPLSLFADGKGLSVTKLI 229

Query: 240 LKGCSFR-SLGSNGYSSXXXXXXXXXXXXXXXXXSILSNSYNLEKLCLRECKGLLSLKVS 416
           L  C+    +G  G+ S                 +++ N  NLE   LR C G   LK++
Sbjct: 230 LAECTLSIPVGFAGFKSLVELSFTEMHISEDMIQTLIENCPNLECFRLRLCSGARHLKIA 289

Query: 417 GPSLKLKHLSVLFCPELKEITIDAENLTIFLYMGKCVKFLPINVPQLSNVSLRTEIDNSR 596
            P L+L+ + V  C ++  + + A  L  F Y G C+  +  +VP + +  L  E     
Sbjct: 290 SPHLQLREIMVKSCLQITHMELFAPKLQQFTYRGPCISMVLSSVPLMEHACLDYEGRRDG 349

Query: 597 EALSYARGKLSSDFPHLKSLILSVEPVEEKN--IPKQLPL-FANLKKLVL 737
           E++ Y  GKLS DF  L SL + +     KN  IP+ +P  F NLK L L
Sbjct: 350 ESVKYILGKLSQDFSLLTSLSIVLNTYRLKNPVIPEVVPTPFKNLKSLTL 399


>ref|XP_002440463.1| hypothetical protein SORBIDRAFT_09g001380 [Sorghum bicolor]
           gi|241945748|gb|EES18893.1| hypothetical protein
           SORBIDRAFT_09g001380 [Sorghum bicolor]
          Length = 461

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 67/234 (28%), Positives = 107/234 (45%), Gaps = 3/234 (1%)
 Frame = +3

Query: 54  KDFSH-HIDQWIKMALAKRCQNPNIGLSHLVILRKIHRDGDLYSQSPCLFSTQEMGSSVK 230
           +DF H  +D+W++  +    +  NI L         H    +Y+  PC   + E+G S++
Sbjct: 94  QDFCHLDLDRWLRNTIKPGIEELNISL---------HGKNTMYN-FPCSLLSDEIGESLR 143

Query: 231 CLSLKGCSFR-SLGSNGYSSXXXXXXXXXXXXXXXXXSILSNSYNLEKLCLRECKGLLSL 407
            L L GC F  ++G     +                  +LSNS++LE+L LR C G++ L
Sbjct: 144 NLHLVGCYFHPTIGLGSLRNLRRIQLCNVSITESQLECLLSNSFSLEQLVLRNCGGIICL 203

Query: 408 KVSGPSL-KLKHLSVLFCPELKEITIDAENLTIFLYMGKCVKFLPINVPQLSNVSLRTEI 584
           K+  P L +L +L V  C  L+ I   A NL+      +   +L + +  L    ++   
Sbjct: 204 KI--PCLQRLSYLEVNSCSRLEVIESKAPNLSSV----RIADYLHVQLSLLETSRIKKYF 257

Query: 585 DNSREALSYARGKLSSDFPHLKSLILSVEPVEEKNIPKQLPLFANLKKLVLLVR 746
            +   A  YAR +L S  P+L+SL LS    E  N P     F +LK L + +R
Sbjct: 258 RSCPGAAFYARTELPSSMPNLESLSLS-SATETINTPLMPSKFLHLKFLTIALR 310


>ref|XP_002449594.1| hypothetical protein SORBIDRAFT_05g019760 [Sorghum bicolor]
           gi|241935437|gb|EES08582.1| hypothetical protein
           SORBIDRAFT_05g019760 [Sorghum bicolor]
          Length = 508

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 67/222 (30%), Positives = 95/222 (42%), Gaps = 1/222 (0%)
 Frame = +3

Query: 69  HIDQWIKMALAKRCQNPNIGLSHLVILRKIHRDGDLYSQSPCLFSTQEMGSSVKCLSLKG 248
           ++D WI++A+    +   + L  +         GD+    PC   + E GSS++ L L G
Sbjct: 139 YLDHWIQVAMTPGIKEFELSLFEI---------GDIKYSFPCSLLSTERGSSIQSLMLSG 189

Query: 249 CSFRSLGSNG-YSSXXXXXXXXXXXXXXXXXSILSNSYNLEKLCLRECKGLLSLKVSGPS 425
           CS  S    G  SS                   LSNS  LEK+ L  C  ++ L++    
Sbjct: 190 CSIHSTAQVGCMSSLTNLNLYEVDISGEELLCFLSNSCALEKISLSNCNNIICLEIPSQL 249

Query: 426 LKLKHLSVLFCPELKEITIDAENLTIFLYMGKCVKFLPINVPQLSNVSLRTEIDNSREAL 605
            KL  LSVL C  L+ I  +A NL+ F   G  +     +  Q+  +  R +   S  AL
Sbjct: 250 QKLNILSVLDCQMLEMIDSNAPNLSTFSCTGHQIHISLGHALQVKEI--RFDCHYSSNAL 307

Query: 606 SYARGKLSSDFPHLKSLILSVEPVEEKNIPKQLPLFANLKKL 731
            YA   L    P+L++L LS    E  N P  L  F  LK L
Sbjct: 308 YYAITNLPFIVPNLQTLFLSTID-ETINTPMTLGKFLQLKFL 348


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