BLASTX nr result

ID: Coptis24_contig00003954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003954
         (1177 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279386.1| PREDICTED: uncharacterized protein LOC100249...   138   2e-30
ref|XP_002311646.1| predicted protein [Populus trichocarpa] gi|2...   124   5e-26
ref|XP_002517061.1| ATP binding protein, putative [Ricinus commu...   124   6e-26
ref|XP_004134432.1| PREDICTED: uncharacterized protein LOC101218...   120   7e-25
ref|XP_004169886.1| PREDICTED: uncharacterized protein LOC101227...   119   2e-24

>ref|XP_002279386.1| PREDICTED: uncharacterized protein LOC100249467 [Vitis vinifera]
           gi|297737117|emb|CBI26318.3| unnamed protein product
           [Vitis vinifera]
          Length = 1117

 Score =  138 bits (348), Expect = 2e-30
 Identities = 80/141 (56%), Positives = 97/141 (68%), Gaps = 1/141 (0%)
 Frame = +3

Query: 465 DAELDVAASFAKTLVSRLYQQSLLDKHGEEMADVDLQRASLLGLFVSNWFGGSDRSNLTM 644
           D ELD     A+ LVS+L Q + L K  +++ D +LQ ASLL LFVS+ FGGSD+S L  
Sbjct: 559 DEELDAITLSAQALVSQLKQLNGLTKERKQVTDDNLQIASLLALFVSDHFGGSDKSALIE 618

Query: 645 KIRKVWSGSNYRKPFVCTYRTRNGVN-GSSSEQNLSMAESFNFVDLCEKSLRIIKQARNS 821
           + RK  SGSNY+KPFVC+  T N  N  +S++QNL   E     DLCEKSLR IK  RNS
Sbjct: 619 RTRKSVSGSNYQKPFVCSCSTGNRNNISTSNKQNLDTVEDIVVSDLCEKSLRSIKARRNS 678

Query: 822 NIVPIGTLRWGVCWHRAVLMK 884
            IVPIGTL++GVC HRAVLMK
Sbjct: 679 IIVPIGTLQFGVCRHRAVLMK 699


>ref|XP_002311646.1| predicted protein [Populus trichocarpa] gi|222851466|gb|EEE89013.1|
            predicted protein [Populus trichocarpa]
          Length = 1214

 Score =  124 bits (311), Expect = 5e-26
 Identities = 71/141 (50%), Positives = 91/141 (64%), Gaps = 1/141 (0%)
 Frame = +3

Query: 465  DAELDVAASFAKTLVSRLYQQSLLDKHGEEMADVDLQRASLLGLFVSNWFGGSDRSNLTM 644
            D +LD  A  A+ LV R  + +   K   ++A  +LQ ASLL LFVS+ FGGSDRS    
Sbjct: 580  DEQLDAVALSAQALVFRFKRSNGSTKERNKVAVDNLQIASLLALFVSDHFGGSDRSGAVE 639

Query: 645  KIRKVWSGSNYRKPFVCTYRTRNGVNGS-SSEQNLSMAESFNFVDLCEKSLRIIKQARNS 821
            + RK  SGSNYRKPFVCT  T N  + S + +Q L   E   F DLCE+SLR IK  R S
Sbjct: 640  RTRKAVSGSNYRKPFVCTCPTGNNESISLAGKQALETVEDIIFSDLCERSLRSIKARRGS 699

Query: 822  NIVPIGTLRWGVCWHRAVLMK 884
             ++P+G+L++GVC HRA+LMK
Sbjct: 700  IVIPLGSLQFGVCRHRALLMK 720


>ref|XP_002517061.1| ATP binding protein, putative [Ricinus communis]
            gi|223543696|gb|EEF45224.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1152

 Score =  124 bits (310), Expect = 6e-26
 Identities = 73/141 (51%), Positives = 91/141 (64%), Gaps = 1/141 (0%)
 Frame = +3

Query: 465  DAELDVAASFAKTLVSRLYQQSLLDKHGEEMADVDLQRASLLGLFVSNWFGGSDRSNLTM 644
            D +LD     A+ LV RL + +   + G + A   LQ ASLL LFVS+ FGGSDRS    
Sbjct: 592  DEKLDATVLSAQALVCRLKRLNGFFEEGNKDAVDVLQIASLLALFVSDHFGGSDRSFTIE 651

Query: 645  KIRKVWSGSNYRKPFVCTYRTRNGVN-GSSSEQNLSMAESFNFVDLCEKSLRIIKQARNS 821
            + RK  SGSNY+KPFVCT  T N  +  +S++Q L  AE   F DLCEKSLR +K  RNS
Sbjct: 652  RTRKAVSGSNYKKPFVCTCSTGNDESINTSTKQILGSAEDIVFSDLCEKSLRSVKAKRNS 711

Query: 822  NIVPIGTLRWGVCWHRAVLMK 884
             IVP+G L++GVC HRA+L K
Sbjct: 712  IIVPLGNLQFGVCRHRALLFK 732


>ref|XP_004134432.1| PREDICTED: uncharacterized protein LOC101218031 [Cucumis sativus]
          Length = 1131

 Score =  120 bits (301), Expect = 7e-25
 Identities = 71/141 (50%), Positives = 93/141 (65%), Gaps = 1/141 (0%)
 Frame = +3

Query: 465 DAELDVAASFAKTLVSRLYQQSLLDKHGEEMADVDLQRASLLGLFVSNWFGGSDRSNLTM 644
           D  LD     AK+LV RL Q + L +  +++ D D+  A LL LFVS+ FGGSDRS +  
Sbjct: 568 DEVLDSITIAAKSLVLRLKQINQLTQERDQVID-DVYIAQLLALFVSDHFGGSDRSAMVE 626

Query: 645 KIRKVWSGSNYRKPFVCTYRTRNGVN-GSSSEQNLSMAESFNFVDLCEKSLRIIKQARNS 821
           K R+V SGS Y+KPFVCT  T +  N  SS++  +   E   F D+CEKSLR IK +RNS
Sbjct: 627 KTRRVVSGSKYQKPFVCTCSTGDRDNLTSSTKLTVDNYEDILFTDICEKSLRSIKASRNS 686

Query: 822 NIVPIGTLRWGVCWHRAVLMK 884
            IVP+G L++GVC HRA+L+K
Sbjct: 687 IIVPLGALQFGVCRHRALLLK 707


>ref|XP_004169886.1| PREDICTED: uncharacterized protein LOC101227936, partial [Cucumis
           sativus]
          Length = 970

 Score =  119 bits (297), Expect = 2e-24
 Identities = 70/141 (49%), Positives = 92/141 (65%), Gaps = 1/141 (0%)
 Frame = +3

Query: 465 DAELDVAASFAKTLVSRLYQQSLLDKHGEEMADVDLQRASLLGLFVSNWFGGSDRSNLTM 644
           D  LD     AK+LV RL Q + L +  +++ D D+  A LL LFVS+ FGGSDRS +  
Sbjct: 407 DEVLDSITIAAKSLVLRLKQINQLTQERDQVID-DVYIAQLLALFVSDHFGGSDRSAMVE 465

Query: 645 KIRKVWSGSNYRKPFVCTYRTRNGVN-GSSSEQNLSMAESFNFVDLCEKSLRIIKQARNS 821
           K R+  SGS Y+KPFVCT  T +  N  SS++  +   E   F D+CEKSLR IK +RNS
Sbjct: 466 KTRRAVSGSKYQKPFVCTCSTGDRDNLTSSTKLTVDNYEDILFTDICEKSLRSIKASRNS 525

Query: 822 NIVPIGTLRWGVCWHRAVLMK 884
            IVP+G L++GVC HRA+L+K
Sbjct: 526 IIVPLGALQFGVCRHRALLLK 546


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