BLASTX nr result

ID: Coptis24_contig00003925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003925
         (2104 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279787.1| PREDICTED: metal tolerance protein C2 [Vitis...   311   e-135
dbj|BAJ34578.1| unnamed protein product [Thellungiella halophila]     311   e-128
ref|NP_187817.2| metal tolerance protein C2 [Arabidopsis thalian...   311   e-127
ref|XP_002884882.1| hypothetical protein ARALYDRAFT_897419 [Arab...   311   e-127
ref|XP_003625268.1| Metal tolerance protein [Medicago truncatula...   307   e-126

>ref|XP_002279787.1| PREDICTED: metal tolerance protein C2 [Vitis vinifera]
            gi|297739829|emb|CBI30011.3| unnamed protein product
            [Vitis vinifera]
          Length = 388

 Score =  311 bits (798), Expect(2) = e-135
 Identities = 155/192 (80%), Positives = 173/192 (90%), Gaps = 1/192 (0%)
 Frame = +2

Query: 1157 VEALHAFIQDESEHKHYLIVSAVTNLLVNMLGVWFFRNYARVNLVYRKAEDMNFHSIFLH 1336
            VEALHAFIQDESEHKHYLIVSAVTNLLVN++GVWFFRNYAR+NLVYRKAEDMN+HS+ LH
Sbjct: 195  VEALHAFIQDESEHKHYLIVSAVTNLLVNLIGVWFFRNYARINLVYRKAEDMNYHSVCLH 254

Query: 1337 VLADSIRSAGIVLASWLLTLGVKNAEVLCLGLVSVAVVMLVIPLFRTTGSILLQMA-PNI 1513
            VLADSIRSAG++LASW LTLGVKNAEVLCLGLVSVAV MLV+PLF+TTG ILLQMA P+I
Sbjct: 255  VLADSIRSAGLILASWFLTLGVKNAEVLCLGLVSVAVFMLVMPLFKTTGGILLQMAPPSI 314

Query: 1514 PSSALNKCLRQITSLEDVSEISQARFWALVPGHVVGSLLIQVKKGADHNPILHYVHSLYH 1693
            P SAL+KC RQIT+ EDV E+SQA FW LVPGHVVGS+ +QVK G D  P+L YVH LYH
Sbjct: 315  PPSALSKCRRQITAHEDVLEVSQACFWELVPGHVVGSVTLQVKDGIDDCPMLQYVHDLYH 374

Query: 1694 DLGVQDLTVQID 1729
            DLGV++LTVQ D
Sbjct: 375  DLGVKELTVQAD 386



 Score =  197 bits (501), Expect(2) = e-135
 Identities = 109/183 (59%), Positives = 135/183 (73%), Gaps = 9/183 (4%)
 Frame = +1

Query: 616  TDTESSPYGFNESDRRLAFTRQSSF-QLNE-HQPISIISNDSIRPLLSRTVSSINIPPPH 789
            +D  +  +GF  SDRR A++RQ+SF QL E H PISIISND  +PLL RTVSSI+IPP  
Sbjct: 7    SDQWNKEFGFGTSDRRFAYSRQASFHQLQEPHTPISIISNDHKKPLLCRTVSSIDIPPTI 66

Query: 790  F-----NNYNKDGNF--EXXXXXXXXXXXYRIIRSGNRAMKRLFVMITLNVAYSTAELFI 948
            +       ++ +G    E           +R++RSGNR M++LFVMI+LNVAYSTAEL I
Sbjct: 67   YPLEENEKFSIEGKDFPEKASFLLVVLWVFRVVRSGNRPMRKLFVMISLNVAYSTAELMI 126

Query: 949  GLFTGRVGLVSDAFHLTFGCGLLTFSLFAMAASRRKLDRVYSYGYQRLEVLSAFTNATAV 1128
            GLFTGR GLVSDAFHLTFGCGLLTFSLFA+A SR K D+VY+YG++R+EVLSAFTNA  +
Sbjct: 127  GLFTGRAGLVSDAFHLTFGCGLLTFSLFAIAVSRNKPDQVYTYGFKRVEVLSAFTNALFL 186

Query: 1129 PFV 1137
             F+
Sbjct: 187  LFM 189


>dbj|BAJ34578.1| unnamed protein product [Thellungiella halophila]
          Length = 393

 Score =  311 bits (796), Expect(2) = e-128
 Identities = 151/192 (78%), Positives = 172/192 (89%), Gaps = 1/192 (0%)
 Frame = +2

Query: 1157 VEALHAFIQDESEHKHYLIVSAVTNLLVNMLGVWFFRNYARVNLVYRKAEDMNFHSIFLH 1336
            VEALHAFIQDESEHKHYLIVSAVTNLLVN+LGVWFFRNYAR+N+VYRKAEDMN+HS+ LH
Sbjct: 200  VEALHAFIQDESEHKHYLIVSAVTNLLVNLLGVWFFRNYARINIVYRKAEDMNYHSVCLH 259

Query: 1337 VLADSIRSAGIVLASWLLTLGVKNAEVLCLGLVSVAVVMLVIPLFRTTGSILLQMA-PNI 1513
            V+ADSIRSAG++LASWLL+LGV+NAEVLCLGLVSV V MLV+P+F+ TG +LLQMA PNI
Sbjct: 260  VIADSIRSAGLILASWLLSLGVENAEVLCLGLVSVTVFMLVMPIFKATGGVLLQMAPPNI 319

Query: 1514 PSSALNKCLRQITSLEDVSEISQARFWALVPGHVVGSLLIQVKKGADHNPILHYVHSLYH 1693
            P SAL+KCLRQITS EDV E+ QARFW +VPGH VGSL IQVK G D  P+L +V+ LYH
Sbjct: 320  PPSALSKCLRQITSREDVMEVLQARFWEVVPGHTVGSLRIQVKSGIDERPLLQFVYDLYH 379

Query: 1694 DLGVQDLTVQID 1729
            DLGVQDLT+Q D
Sbjct: 380  DLGVQDLTLQTD 391



 Score =  177 bits (450), Expect(2) = e-128
 Identities = 102/197 (51%), Positives = 128/197 (64%), Gaps = 12/197 (6%)
 Frame = +1

Query: 583  MKKTTSFVYRKT----DTESSPYGFNESDRRLAFTRQSSFQLNEHQPISIISNDSIRPLL 750
            M+++ SF +R+     +  S   G+  +DRRLA++R  SFQ   H P +    D+ +P L
Sbjct: 1    MERSISFDHRRDKEVPNDRSGDVGYTANDRRLAYSR--SFQ-QSHGPRTPAVTDAAKPFL 57

Query: 751  SRTVSSINIPPPH--------FNNYNKDGNFEXXXXXXXXXXXYRIIRSGNRAMKRLFVM 906
             RTVSSI++PP          F+   K                + ++RSGNR MKRLF++
Sbjct: 58   DRTVSSIDMPPEIYSVDGNDVFSGEGKAAELGKVSVLHMVWVIFGVLRSGNRQMKRLFLL 117

Query: 907  ITLNVAYSTAELFIGLFTGRVGLVSDAFHLTFGCGLLTFSLFAMAASRRKLDRVYSYGYQ 1086
            I+LNVAYST EL IGL TGRVGLVSDAFHLTFGCGLLTFSLFAMA SR+K D  YSYGY+
Sbjct: 118  ISLNVAYSTTELLIGLLTGRVGLVSDAFHLTFGCGLLTFSLFAMATSRKKPDHAYSYGYK 177

Query: 1087 RLEVLSAFTNATAVPFV 1137
            RLEVLSAFTNA  + F+
Sbjct: 178  RLEVLSAFTNALFLMFM 194


>ref|NP_187817.2| metal tolerance protein C2 [Arabidopsis thaliana]
            gi|71151964|sp|Q6ICY4.1|MTPC2_ARATH RecName: Full=Metal
            tolerance protein C2; Short=AtMTPc2; AltName: Full=AtMTP5
            gi|48475046|gb|AAT44130.1| At3g12100 [Arabidopsis
            thaliana] gi|52627119|gb|AAU84686.1| At3g12100
            [Arabidopsis thaliana] gi|110743873|dbj|BAE99771.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|332641628|gb|AEE75149.1| metal tolerance protein C2
            [Arabidopsis thaliana]
          Length = 393

 Score =  311 bits (798), Expect(2) = e-127
 Identities = 151/192 (78%), Positives = 173/192 (90%), Gaps = 1/192 (0%)
 Frame = +2

Query: 1157 VEALHAFIQDESEHKHYLIVSAVTNLLVNMLGVWFFRNYARVNLVYRKAEDMNFHSIFLH 1336
            VEALHAFIQDESEHKHYLIVSAVTNLLVN+LGVWFFRNYARVN+ YRKAEDMN+HS+ LH
Sbjct: 200  VEALHAFIQDESEHKHYLIVSAVTNLLVNLLGVWFFRNYARVNIAYRKAEDMNYHSVCLH 259

Query: 1337 VLADSIRSAGIVLASWLLTLGVKNAEVLCLGLVSVAVVMLVIPLFRTTGSILLQMA-PNI 1513
            V++DSIRSAG++LASWLL+LGV+NAEVLCLGLVSV V MLV+PLF+ TG +LLQMA PNI
Sbjct: 260  VISDSIRSAGLILASWLLSLGVENAEVLCLGLVSVTVFMLVMPLFKATGGVLLQMAPPNI 319

Query: 1514 PSSALNKCLRQITSLEDVSEISQARFWALVPGHVVGSLLIQVKKGADHNPILHYVHSLYH 1693
            PSSAL+KCLRQITS EDV+E+ QARFW +VPGH VGSL +QVK G D  P+L YV+ +YH
Sbjct: 320  PSSALSKCLRQITSREDVTEVLQARFWEVVPGHTVGSLRLQVKSGIDERPLLQYVYDVYH 379

Query: 1694 DLGVQDLTVQID 1729
            DLGVQDLT+Q D
Sbjct: 380  DLGVQDLTLQTD 391



 Score =  174 bits (440), Expect(2) = e-127
 Identities = 97/181 (53%), Positives = 120/181 (66%), Gaps = 8/181 (4%)
 Frame = +1

Query: 619  DTESSPYGFNESDRRLAFTRQSSFQLNEHQPISIISNDSIRPLLSRTVSSINIPPPHFN- 795
            D  SS  G+  +DRRLA++R  SFQ   H P +    ++ +P L RTVSSI++PP  ++ 
Sbjct: 17   DDRSSDVGYAANDRRLAYSR--SFQ-QSHGPRTPAVTEAAKPFLDRTVSSIDMPPDIYSV 73

Query: 796  -------NYNKDGNFEXXXXXXXXXXXYRIIRSGNRAMKRLFVMITLNVAYSTAELFIGL 954
                      KD +             + ++ SGNR MKRLF++I LNV YST EL IG+
Sbjct: 74   DGSDVFFGEGKDVDMAKVSVLEMVWEVFGVVTSGNRQMKRLFLLIALNVLYSTTELSIGI 133

Query: 955  FTGRVGLVSDAFHLTFGCGLLTFSLFAMAASRRKLDRVYSYGYQRLEVLSAFTNATAVPF 1134
            FTGRVGLVSDAFHLTFGCGLLTFSLFAMA SR+K D  YSYGY+RLEVLSAFTNA  + F
Sbjct: 134  FTGRVGLVSDAFHLTFGCGLLTFSLFAMATSRKKPDHAYSYGYKRLEVLSAFTNALFLMF 193

Query: 1135 V 1137
            +
Sbjct: 194  M 194


>ref|XP_002884882.1| hypothetical protein ARALYDRAFT_897419 [Arabidopsis lyrata subsp.
            lyrata] gi|297330722|gb|EFH61141.1| hypothetical protein
            ARALYDRAFT_897419 [Arabidopsis lyrata subsp. lyrata]
          Length = 393

 Score =  311 bits (798), Expect(2) = e-127
 Identities = 151/192 (78%), Positives = 172/192 (89%), Gaps = 1/192 (0%)
 Frame = +2

Query: 1157 VEALHAFIQDESEHKHYLIVSAVTNLLVNMLGVWFFRNYARVNLVYRKAEDMNFHSIFLH 1336
            VEALHAFIQDESEHKHYLIVSAVTNLLVN+LGVWFFRNYARVN+ YRKAEDMN+HS+ LH
Sbjct: 200  VEALHAFIQDESEHKHYLIVSAVTNLLVNLLGVWFFRNYARVNIAYRKAEDMNYHSVCLH 259

Query: 1337 VLADSIRSAGIVLASWLLTLGVKNAEVLCLGLVSVAVVMLVIPLFRTTGSILLQMA-PNI 1513
            V+ADSIRSAG++LASWLL+LGV+NAEVLCLGLVS+ V MLV+PLF+ TG +LLQMA PNI
Sbjct: 260  VIADSIRSAGLILASWLLSLGVENAEVLCLGLVSITVFMLVMPLFKATGGVLLQMAPPNI 319

Query: 1514 PSSALNKCLRQITSLEDVSEISQARFWALVPGHVVGSLLIQVKKGADHNPILHYVHSLYH 1693
            PSSAL+KCLRQITS EDV E+ QARFW +VPGH VGSL +QVK G D  P+L YV+ +YH
Sbjct: 320  PSSALSKCLRQITSREDVMEVLQARFWEVVPGHTVGSLRLQVKSGIDERPLLQYVYDVYH 379

Query: 1694 DLGVQDLTVQID 1729
            DLGVQDLT+Q D
Sbjct: 380  DLGVQDLTLQTD 391



 Score =  172 bits (437), Expect(2) = e-127
 Identities = 97/178 (54%), Positives = 119/178 (66%), Gaps = 8/178 (4%)
 Frame = +1

Query: 628  SSPYGFNESDRRLAFTRQSSFQLNEHQPISIISNDSIRPLLSRTVSSINIPPPHFN---- 795
            SS  G+  +DRRLA++R  SFQ   H P +    ++ +P L RTVSSI++PP  ++    
Sbjct: 20   SSDVGYVANDRRLAYSR--SFQ-QSHGPRTPAVTEAAKPFLDRTVSSIDMPPEIYSVDGN 76

Query: 796  ----NYNKDGNFEXXXXXXXXXXXYRIIRSGNRAMKRLFVMITLNVAYSTAELFIGLFTG 963
                   KD               + ++RSGNR MKRLF++I LNV YST EL IG+FTG
Sbjct: 77   DVFYGEGKDVEIGKVSVLDMVWEIFGVLRSGNRQMKRLFLLIALNVLYSTTELSIGIFTG 136

Query: 964  RVGLVSDAFHLTFGCGLLTFSLFAMAASRRKLDRVYSYGYQRLEVLSAFTNATAVPFV 1137
            RVGLVSDAFHLTFGCGLLTFSLFAMA SR+K D  YSYGY+RLEVLSAFTNA  + F+
Sbjct: 137  RVGLVSDAFHLTFGCGLLTFSLFAMATSRKKPDHAYSYGYKRLEVLSAFTNALFLMFM 194


>ref|XP_003625268.1| Metal tolerance protein [Medicago truncatula]
            gi|355500283|gb|AES81486.1| Metal tolerance protein
            [Medicago truncatula]
          Length = 388

 Score =  307 bits (786), Expect(2) = e-126
 Identities = 150/192 (78%), Positives = 171/192 (89%), Gaps = 1/192 (0%)
 Frame = +2

Query: 1157 VEALHAFIQDESEHKHYLIVSAVTNLLVNMLGVWFFRNYARVNLVYRKAEDMNFHSIFLH 1336
            VEALHAFIQDESEHKHYL VSAVTNL VN++GVWFFRNYAR+NL YR AEDMN HS+FLH
Sbjct: 195  VEALHAFIQDESEHKHYLNVSAVTNLFVNLIGVWFFRNYARINLAYRNAEDMNCHSVFLH 254

Query: 1337 VLADSIRSAGIVLASWLLTLGVKNAEVLCLGLVSVAVVMLVIPLFRTTGSILLQMA-PNI 1513
            VL DSIRSAG++LASWLL++GV+NAEVLCLGLVSVAV +LV+PLFR TG ILLQMA P+I
Sbjct: 255  VLTDSIRSAGLILASWLLSIGVENAEVLCLGLVSVAVFILVLPLFRATGGILLQMAPPSI 314

Query: 1514 PSSALNKCLRQITSLEDVSEISQARFWALVPGHVVGSLLIQVKKGADHNPILHYVHSLYH 1693
            P++A +KCLRQI++ EDV ++SQARFW LVPGHVVGSL +QVKKG D  PIL +VH LYH
Sbjct: 315  PTTAFSKCLRQISAHEDVLDVSQARFWELVPGHVVGSLSMQVKKGVDDRPILEFVHRLYH 374

Query: 1694 DLGVQDLTVQID 1729
            D GVQDLTVQID
Sbjct: 375  DFGVQDLTVQID 386



 Score =  174 bits (441), Expect(2) = e-126
 Identities = 102/176 (57%), Positives = 119/176 (67%), Gaps = 9/176 (5%)
 Frame = +1

Query: 637  YGFNESDRRLAFTRQSSFQLNEHQPISIISNDS--IRPLLSRTVSSINIPPPHFNNY--- 801
            +GF  +DRR AF+RQ SFQ     PIS  S DS   +P LSRT SSI+IP    N++   
Sbjct: 15   FGFTANDRRFAFSRQPSFQ-QPRTPISTPSTDSGLRKPFLSRTDSSIDIPSSGPNHHYWS 73

Query: 802  ----NKDGNFEXXXXXXXXXXXYRIIRSGNRAMKRLFVMITLNVAYSTAELFIGLFTGRV 969
                   G+ +           +R IRSG+R MKRLF MI+LNVAYST EL IGLFTGRV
Sbjct: 74   CHDEKPSGSSKKLSFSSFVLSLFRSIRSGHRYMKRLFFMISLNVAYSTVELLIGLFTGRV 133

Query: 970  GLVSDAFHLTFGCGLLTFSLFAMAASRRKLDRVYSYGYQRLEVLSAFTNATAVPFV 1137
            GLVSDA HLTFGCGLLTFSLF M ASR+K D  Y+YGY+RLEVLSAFTNA  + F+
Sbjct: 134  GLVSDAVHLTFGCGLLTFSLFVMGASRKKPDGDYTYGYKRLEVLSAFTNALFLLFM 189


Top