BLASTX nr result

ID: Coptis24_contig00003913 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003913
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283145.1| PREDICTED: expansin-A20 [Vitis vinifera] gi|...   212   2e-53
ref|XP_004144957.1| PREDICTED: expansin-A16-like [Cucumis sativu...   211   5e-53
ref|XP_002313572.1| hypothetical protein POPTRDRAFT_820963 [Popu...   207   9e-52
ref|XP_002328142.1| hypothetical protein POPTRDRAFT_827261 [Popu...   204   8e-51
gb|AFK38509.1| unknown [Medicago truncatula]                          202   2e-50

>ref|XP_002283145.1| PREDICTED: expansin-A20 [Vitis vinifera]
           gi|297744459|emb|CBI37721.3| unnamed protein product
           [Vitis vinifera]
          Length = 250

 Score =  212 bits (540), Expect = 2e-53
 Identities = 89/117 (76%), Positives = 106/117 (90%)
 Frame = -2

Query: 351 TQAKGDEWRSATATYTKETDGSLITEGACGYGDLHKTSYGKLSVGLSSLLFDRGRICGGC 172
           T A+ ++W+SATATY+KETD S+ITEGACGYGDLHKTSYGK S GLS++LF+RG  CGGC
Sbjct: 19  TNAQVEQWKSATATYSKETDASIITEGACGYGDLHKTSYGKYSAGLSTMLFNRGSTCGGC 78

Query: 171 FEIRCVNHILWCLQGSPSIVVTATDFCPPNYGLANDYGGWCNFPREHFEMSEVAFGD 1
           FE+RCV+HILWCLQGSPS+++TATDFCPPN+GL  DYGGWCNFP+EHFEMSE AF +
Sbjct: 79  FELRCVDHILWCLQGSPSVILTATDFCPPNFGLPTDYGGWCNFPQEHFEMSEAAFAE 135


>ref|XP_004144957.1| PREDICTED: expansin-A16-like [Cucumis sativus]
           gi|449473011|ref|XP_004153758.1| PREDICTED:
           expansin-A16-like [Cucumis sativus]
           gi|449517152|ref|XP_004165610.1| PREDICTED:
           expansin-A16-like [Cucumis sativus]
          Length = 252

 Score =  211 bits (537), Expect = 5e-53
 Identities = 88/115 (76%), Positives = 105/115 (91%)
 Frame = -2

Query: 345 AKGDEWRSATATYTKETDGSLITEGACGYGDLHKTSYGKLSVGLSSLLFDRGRICGGCFE 166
           AK +EW SATATY+KETDGS++TEGACGYGDLHK SYGK S GLSS+LF+RG  CG C+E
Sbjct: 23  AKDEEWISATATYSKETDGSIVTEGACGYGDLHKISYGKYSAGLSSMLFNRGSTCGACYE 82

Query: 165 IRCVNHILWCLQGSPSIVVTATDFCPPNYGLANDYGGWCNFPREHFEMSEVAFGD 1
           +RCV+HILWCLQGSP++++TATDFCPPNYGL++DYGGWCNFP+EHFEMSE AF +
Sbjct: 83  LRCVDHILWCLQGSPTVILTATDFCPPNYGLSSDYGGWCNFPKEHFEMSEAAFAE 137


>ref|XP_002313572.1| hypothetical protein POPTRDRAFT_820963 [Populus trichocarpa]
           gi|118483271|gb|ABK93538.1| unknown [Populus
           trichocarpa] gi|222849980|gb|EEE87527.1| hypothetical
           protein POPTRDRAFT_820963 [Populus trichocarpa]
          Length = 250

 Score =  207 bits (526), Expect = 9e-52
 Identities = 86/122 (70%), Positives = 103/122 (84%)
 Frame = -2

Query: 366 HNLHHTQAKGDEWRSATATYTKETDGSLITEGACGYGDLHKTSYGKLSVGLSSLLFDRGR 187
           H      A  +EW+SATATY KET GS+I EGACGYGDLH+ +YGK S GLSS+LF+RG 
Sbjct: 14  HQTWKITADDEEWKSATATYVKETSGSIIVEGACGYGDLHRATYGKYSAGLSSMLFNRGS 73

Query: 186 ICGGCFEIRCVNHILWCLQGSPSIVVTATDFCPPNYGLANDYGGWCNFPREHFEMSEVAF 7
            CG CFE+RCV+HILWCLQGSPS+++TATDFCPPNYGL++DYGGWCNFP+EHF+MSE AF
Sbjct: 74  TCGACFEVRCVDHILWCLQGSPSVILTATDFCPPNYGLSSDYGGWCNFPKEHFDMSEAAF 133

Query: 6   GD 1
            +
Sbjct: 134 AE 135


>ref|XP_002328142.1| hypothetical protein POPTRDRAFT_827261 [Populus trichocarpa]
           gi|222837657|gb|EEE76022.1| hypothetical protein
           POPTRDRAFT_827261 [Populus trichocarpa]
          Length = 250

 Score =  204 bits (518), Expect = 8e-51
 Identities = 85/120 (70%), Positives = 101/120 (84%)
 Frame = -2

Query: 366 HNLHHTQAKGDEWRSATATYTKETDGSLITEGACGYGDLHKTSYGKLSVGLSSLLFDRGR 187
           H      A  +EW+SATATY KET+GS++ EGACGY DLHK +YGK S GLSS+LF+RG 
Sbjct: 14  HQTWKITADDEEWKSATATYVKETNGSIVVEGACGYADLHKATYGKYSAGLSSMLFNRGS 73

Query: 186 ICGGCFEIRCVNHILWCLQGSPSIVVTATDFCPPNYGLANDYGGWCNFPREHFEMSEVAF 7
            CG CFE+RCV+HILWCLQGSPS+++TATDFCPPNYGL+ DYGGWCNFP+EHF+MSE AF
Sbjct: 74  TCGACFEVRCVDHILWCLQGSPSVILTATDFCPPNYGLSADYGGWCNFPKEHFDMSEAAF 133


>gb|AFK38509.1| unknown [Medicago truncatula]
          Length = 256

 Score =  202 bits (515), Expect = 2e-50
 Identities = 85/114 (74%), Positives = 101/114 (88%)
 Frame = -2

Query: 342 KGDEWRSATATYTKETDGSLITEGACGYGDLHKTSYGKLSVGLSSLLFDRGRICGGCFEI 163
           K  EW+ ATATY K+T+GSLITEGACGYGDLHK SYGK SVGLS++LF+RG  CG C+EI
Sbjct: 28  KDQEWKKATATYAKDTEGSLITEGACGYGDLHKASYGKHSVGLSTILFNRGSTCGACYEI 87

Query: 162 RCVNHILWCLQGSPSIVVTATDFCPPNYGLANDYGGWCNFPREHFEMSEVAFGD 1
           RCV+HILWC+ GSPS++VTATDFCPPN+GL+ DYGGWCNFPREHFE+S+ AF +
Sbjct: 88  RCVDHILWCMLGSPSVIVTATDFCPPNFGLSVDYGGWCNFPREHFELSQAAFAE 141


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