BLASTX nr result

ID: Coptis24_contig00003910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003910
         (649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264062.1| PREDICTED: ATPase WRNIP1-like [Vitis vinifera]    213   2e-53
ref|XP_002316599.1| predicted protein [Populus trichocarpa] gi|2...   211   9e-53
ref|XP_004170546.1| PREDICTED: ATPase WRNIP1-like, partial [Cucu...   210   2e-52
ref|XP_004147772.1| PREDICTED: ATPase WRNIP1-like [Cucumis sativus]   209   5e-52
ref|XP_002890715.1| AAA-type ATPase family protein [Arabidopsis ...   206   2e-51

>ref|XP_002264062.1| PREDICTED: ATPase WRNIP1-like [Vitis vinifera]
          Length = 534

 Score =  213 bits (542), Expect = 2e-53
 Identities = 124/215 (57%), Positives = 135/215 (62%)
 Frame = +3

Query: 3   GTIVFIGATTENPSFHLITPLLSRCRVLKLNSLEPEIIGRLLRRAVDDGEKGLRKSXXXX 182
           G+IVFIGATTENPSFHLITPLLSRCRVL LN L+P  +  LL RAV D  +GL  S    
Sbjct: 234 GSIVFIGATTENPSFHLITPLLSRCRVLTLNPLQPSHVASLLNRAVADTGRGLAWSVGGA 293

Query: 183 XXXXXXXXXXXLSLNSDGDARVXXXXXXXXXXXXXXRELSSKDKGTLVSFQTEDVTFDNS 362
                      LS + DGDARV              R                       
Sbjct: 294 SIEVSDDAIDFLSSHCDGDARVALNALEISAVTAAARH--------------------GE 333

Query: 363 SLVPFNGLGSGENGVGSLAAVVTLDDAKEALQCKHLAYDRAGEEHYNLISALHKSLRGSD 542
           +LV  NG+GS      S    VTLDDAKEALQ KHLAYD+AGEEHYNLISALHKS+RGSD
Sbjct: 334 NLVENNGVGS------SQVTTVTLDDAKEALQSKHLAYDKAGEEHYNLISALHKSMRGSD 387

Query: 543 ANASIYWLARMLEGGEHPLYIARRLVRFASEDVGL 647
           A+ASIYWLARMLEGGE PLYIARRL+RFASEDVGL
Sbjct: 388 ADASIYWLARMLEGGEEPLYIARRLIRFASEDVGL 422


>ref|XP_002316599.1| predicted protein [Populus trichocarpa] gi|222859664|gb|EEE97211.1|
           predicted protein [Populus trichocarpa]
          Length = 553

 Score =  211 bits (537), Expect = 9e-53
 Identities = 124/215 (57%), Positives = 138/215 (64%)
 Frame = +3

Query: 3   GTIVFIGATTENPSFHLITPLLSRCRVLKLNSLEPEIIGRLLRRAVDDGEKGLRKSXXXX 182
           GTIVFIGATTENPSFHL+TPLLSRCRVL L+ L+P  +  +L+RAV+D +KGL KS    
Sbjct: 252 GTIVFIGATTENPSFHLVTPLLSRCRVLTLSPLKPHHVQTILKRAVNDPDKGLSKSLGSL 311

Query: 183 XXXXXXXXXXXLSLNSDGDARVXXXXXXXXXXXXXXRELSSKDKGTLVSFQTEDVTFDNS 362
                      LS N DGDARV               E+S+      V            
Sbjct: 312 GVDVSEDAVEFLSTNCDGDARVALNAL----------EISAATAAARV------------ 349

Query: 363 SLVPFNGLGSGENGVGSLAAVVTLDDAKEALQCKHLAYDRAGEEHYNLISALHKSLRGSD 542
                     G +G   LA+V  LDDAKEALQ KHLAYDRAGEEHYNLISALHKS+RGSD
Sbjct: 350 ----------GSDGDLRLASVA-LDDAKEALQSKHLAYDRAGEEHYNLISALHKSMRGSD 398

Query: 543 ANASIYWLARMLEGGEHPLYIARRLVRFASEDVGL 647
           A+ASIYWL RMLEGGE PLYIARRLVRFASEDVGL
Sbjct: 399 ADASIYWLVRMLEGGEQPLYIARRLVRFASEDVGL 433


>ref|XP_004170546.1| PREDICTED: ATPase WRNIP1-like, partial [Cucumis sativus]
          Length = 446

 Score =  210 bits (534), Expect = 2e-52
 Identities = 119/215 (55%), Positives = 142/215 (66%)
 Frame = +3

Query: 3   GTIVFIGATTENPSFHLITPLLSRCRVLKLNSLEPEIIGRLLRRAVDDGEKGLRKSXXXX 182
           G+I+F+GATTENPSFHLITPLLSR RVL LN L+P  +  +L+RAVDD +KGL ++    
Sbjct: 123 GSIIFLGATTENPSFHLITPLLSRSRVLTLNPLKPHHVTLILKRAVDDSDKGLARTISMA 182

Query: 183 XXXXXXXXXXXLSLNSDGDARVXXXXXXXXXXXXXXRELSSKDKGTLVSFQTEDVTFDNS 362
                      ++ N DGDAR                E+S+       + +T  V  D+ 
Sbjct: 183 VQIGEDAIDF-IAANCDGDARTALNAL----------EISA----ITAAARTNSVQIDDR 227

Query: 363 SLVPFNGLGSGENGVGSLAAVVTLDDAKEALQCKHLAYDRAGEEHYNLISALHKSLRGSD 542
           ++            V S  AVVTLDD KEALQCKH+AYD+AGEEHYNLISALHKS+RG D
Sbjct: 228 NV---EDPDENTTNVESSVAVVTLDDVKEALQCKHIAYDKAGEEHYNLISALHKSMRGCD 284

Query: 543 ANASIYWLARMLEGGEHPLYIARRLVRFASEDVGL 647
           A+ASIYWLARMLEGGE PLYIARRLVRFASEDVGL
Sbjct: 285 ADASIYWLARMLEGGEQPLYIARRLVRFASEDVGL 319


>ref|XP_004147772.1| PREDICTED: ATPase WRNIP1-like [Cucumis sativus]
          Length = 513

 Score =  209 bits (531), Expect = 5e-52
 Identities = 119/215 (55%), Positives = 138/215 (64%)
 Frame = +3

Query: 3   GTIVFIGATTENPSFHLITPLLSRCRVLKLNSLEPEIIGRLLRRAVDDGEKGLRKSXXXX 182
           G+I+F+GATTENPSFHLITPLLSR RVL LN L+P  +  +L+RAVDD +KGL ++    
Sbjct: 197 GSIIFLGATTENPSFHLITPLLSRSRVLTLNPLKPHHVTLILKRAVDDSDKGLARTISMG 256

Query: 183 XXXXXXXXXXXLSLNSDGDARVXXXXXXXXXXXXXXRELSSKDKGTLVSFQTEDVTFDNS 362
                      ++ N DGDAR               R  S +     V    E+ T   S
Sbjct: 257 VQIGEDAIDF-IAANCDGDARTALNALEISAITAAARTNSVQIDDRNVEDPDENTTNFES 315

Query: 363 SLVPFNGLGSGENGVGSLAAVVTLDDAKEALQCKHLAYDRAGEEHYNLISALHKSLRGSD 542
           S+                 AVVTLDD KEALQCKH+AYD+AGEEHYNLISALHKS+RG D
Sbjct: 316 SV-----------------AVVTLDDVKEALQCKHIAYDKAGEEHYNLISALHKSMRGCD 358

Query: 543 ANASIYWLARMLEGGEHPLYIARRLVRFASEDVGL 647
           A+ASIYWLARMLEGGE PLYIARRLVRFASEDVGL
Sbjct: 359 ADASIYWLARMLEGGEQPLYIARRLVRFASEDVGL 393


>ref|XP_002890715.1| AAA-type ATPase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297336557|gb|EFH66974.1| AAA-type ATPase family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 525

 Score =  206 bits (525), Expect = 2e-51
 Identities = 118/215 (54%), Positives = 136/215 (63%)
 Frame = +3

Query: 3   GTIVFIGATTENPSFHLITPLLSRCRVLKLNSLEPEIIGRLLRRAVDDGEKGLRKSXXXX 182
           G+I+FIGATTENPSFHLITPLLSRCRVL LN L+P  +  LLRRAVDD E+GL  S    
Sbjct: 225 GSILFIGATTENPSFHLITPLLSRCRVLTLNPLKPNHVETLLRRAVDDSERGLSNSVEVD 284

Query: 183 XXXXXXXXXXXLSLNSDGDARVXXXXXXXXXXXXXXRELSSKDKGTLVSFQTEDVTFDNS 362
                      L+ N DGDARV                                   + S
Sbjct: 285 DSVIEF-----LAYNCDGDARVALN------------------------------ALEIS 309

Query: 363 SLVPFNGLGSGENGVGSLAAVVTLDDAKEALQCKHLAYDRAGEEHYNLISALHKSLRGSD 542
           + +     GS         AVV++DDAKEALQCKHLAYD+AG++HYNLISALHKS+RG D
Sbjct: 310 ATMATARAGSD--------AVVSIDDAKEALQCKHLAYDKAGDQHYNLISALHKSMRGGD 361

Query: 543 ANASIYWLARMLEGGEHPLYIARRLVRFASEDVGL 647
           ANA+IYWLARMLEGGE PLYIARRL+RFASED+GL
Sbjct: 362 ANAAIYWLARMLEGGEEPLYIARRLIRFASEDIGL 396


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