BLASTX nr result
ID: Coptis24_contig00003910
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00003910 (649 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002264062.1| PREDICTED: ATPase WRNIP1-like [Vitis vinifera] 213 2e-53 ref|XP_002316599.1| predicted protein [Populus trichocarpa] gi|2... 211 9e-53 ref|XP_004170546.1| PREDICTED: ATPase WRNIP1-like, partial [Cucu... 210 2e-52 ref|XP_004147772.1| PREDICTED: ATPase WRNIP1-like [Cucumis sativus] 209 5e-52 ref|XP_002890715.1| AAA-type ATPase family protein [Arabidopsis ... 206 2e-51 >ref|XP_002264062.1| PREDICTED: ATPase WRNIP1-like [Vitis vinifera] Length = 534 Score = 213 bits (542), Expect = 2e-53 Identities = 124/215 (57%), Positives = 135/215 (62%) Frame = +3 Query: 3 GTIVFIGATTENPSFHLITPLLSRCRVLKLNSLEPEIIGRLLRRAVDDGEKGLRKSXXXX 182 G+IVFIGATTENPSFHLITPLLSRCRVL LN L+P + LL RAV D +GL S Sbjct: 234 GSIVFIGATTENPSFHLITPLLSRCRVLTLNPLQPSHVASLLNRAVADTGRGLAWSVGGA 293 Query: 183 XXXXXXXXXXXLSLNSDGDARVXXXXXXXXXXXXXXRELSSKDKGTLVSFQTEDVTFDNS 362 LS + DGDARV R Sbjct: 294 SIEVSDDAIDFLSSHCDGDARVALNALEISAVTAAARH--------------------GE 333 Query: 363 SLVPFNGLGSGENGVGSLAAVVTLDDAKEALQCKHLAYDRAGEEHYNLISALHKSLRGSD 542 +LV NG+GS S VTLDDAKEALQ KHLAYD+AGEEHYNLISALHKS+RGSD Sbjct: 334 NLVENNGVGS------SQVTTVTLDDAKEALQSKHLAYDKAGEEHYNLISALHKSMRGSD 387 Query: 543 ANASIYWLARMLEGGEHPLYIARRLVRFASEDVGL 647 A+ASIYWLARMLEGGE PLYIARRL+RFASEDVGL Sbjct: 388 ADASIYWLARMLEGGEEPLYIARRLIRFASEDVGL 422 >ref|XP_002316599.1| predicted protein [Populus trichocarpa] gi|222859664|gb|EEE97211.1| predicted protein [Populus trichocarpa] Length = 553 Score = 211 bits (537), Expect = 9e-53 Identities = 124/215 (57%), Positives = 138/215 (64%) Frame = +3 Query: 3 GTIVFIGATTENPSFHLITPLLSRCRVLKLNSLEPEIIGRLLRRAVDDGEKGLRKSXXXX 182 GTIVFIGATTENPSFHL+TPLLSRCRVL L+ L+P + +L+RAV+D +KGL KS Sbjct: 252 GTIVFIGATTENPSFHLVTPLLSRCRVLTLSPLKPHHVQTILKRAVNDPDKGLSKSLGSL 311 Query: 183 XXXXXXXXXXXLSLNSDGDARVXXXXXXXXXXXXXXRELSSKDKGTLVSFQTEDVTFDNS 362 LS N DGDARV E+S+ V Sbjct: 312 GVDVSEDAVEFLSTNCDGDARVALNAL----------EISAATAAARV------------ 349 Query: 363 SLVPFNGLGSGENGVGSLAAVVTLDDAKEALQCKHLAYDRAGEEHYNLISALHKSLRGSD 542 G +G LA+V LDDAKEALQ KHLAYDRAGEEHYNLISALHKS+RGSD Sbjct: 350 ----------GSDGDLRLASVA-LDDAKEALQSKHLAYDRAGEEHYNLISALHKSMRGSD 398 Query: 543 ANASIYWLARMLEGGEHPLYIARRLVRFASEDVGL 647 A+ASIYWL RMLEGGE PLYIARRLVRFASEDVGL Sbjct: 399 ADASIYWLVRMLEGGEQPLYIARRLVRFASEDVGL 433 >ref|XP_004170546.1| PREDICTED: ATPase WRNIP1-like, partial [Cucumis sativus] Length = 446 Score = 210 bits (534), Expect = 2e-52 Identities = 119/215 (55%), Positives = 142/215 (66%) Frame = +3 Query: 3 GTIVFIGATTENPSFHLITPLLSRCRVLKLNSLEPEIIGRLLRRAVDDGEKGLRKSXXXX 182 G+I+F+GATTENPSFHLITPLLSR RVL LN L+P + +L+RAVDD +KGL ++ Sbjct: 123 GSIIFLGATTENPSFHLITPLLSRSRVLTLNPLKPHHVTLILKRAVDDSDKGLARTISMA 182 Query: 183 XXXXXXXXXXXLSLNSDGDARVXXXXXXXXXXXXXXRELSSKDKGTLVSFQTEDVTFDNS 362 ++ N DGDAR E+S+ + +T V D+ Sbjct: 183 VQIGEDAIDF-IAANCDGDARTALNAL----------EISA----ITAAARTNSVQIDDR 227 Query: 363 SLVPFNGLGSGENGVGSLAAVVTLDDAKEALQCKHLAYDRAGEEHYNLISALHKSLRGSD 542 ++ V S AVVTLDD KEALQCKH+AYD+AGEEHYNLISALHKS+RG D Sbjct: 228 NV---EDPDENTTNVESSVAVVTLDDVKEALQCKHIAYDKAGEEHYNLISALHKSMRGCD 284 Query: 543 ANASIYWLARMLEGGEHPLYIARRLVRFASEDVGL 647 A+ASIYWLARMLEGGE PLYIARRLVRFASEDVGL Sbjct: 285 ADASIYWLARMLEGGEQPLYIARRLVRFASEDVGL 319 >ref|XP_004147772.1| PREDICTED: ATPase WRNIP1-like [Cucumis sativus] Length = 513 Score = 209 bits (531), Expect = 5e-52 Identities = 119/215 (55%), Positives = 138/215 (64%) Frame = +3 Query: 3 GTIVFIGATTENPSFHLITPLLSRCRVLKLNSLEPEIIGRLLRRAVDDGEKGLRKSXXXX 182 G+I+F+GATTENPSFHLITPLLSR RVL LN L+P + +L+RAVDD +KGL ++ Sbjct: 197 GSIIFLGATTENPSFHLITPLLSRSRVLTLNPLKPHHVTLILKRAVDDSDKGLARTISMG 256 Query: 183 XXXXXXXXXXXLSLNSDGDARVXXXXXXXXXXXXXXRELSSKDKGTLVSFQTEDVTFDNS 362 ++ N DGDAR R S + V E+ T S Sbjct: 257 VQIGEDAIDF-IAANCDGDARTALNALEISAITAAARTNSVQIDDRNVEDPDENTTNFES 315 Query: 363 SLVPFNGLGSGENGVGSLAAVVTLDDAKEALQCKHLAYDRAGEEHYNLISALHKSLRGSD 542 S+ AVVTLDD KEALQCKH+AYD+AGEEHYNLISALHKS+RG D Sbjct: 316 SV-----------------AVVTLDDVKEALQCKHIAYDKAGEEHYNLISALHKSMRGCD 358 Query: 543 ANASIYWLARMLEGGEHPLYIARRLVRFASEDVGL 647 A+ASIYWLARMLEGGE PLYIARRLVRFASEDVGL Sbjct: 359 ADASIYWLARMLEGGEQPLYIARRLVRFASEDVGL 393 >ref|XP_002890715.1| AAA-type ATPase family protein [Arabidopsis lyrata subsp. lyrata] gi|297336557|gb|EFH66974.1| AAA-type ATPase family protein [Arabidopsis lyrata subsp. lyrata] Length = 525 Score = 206 bits (525), Expect = 2e-51 Identities = 118/215 (54%), Positives = 136/215 (63%) Frame = +3 Query: 3 GTIVFIGATTENPSFHLITPLLSRCRVLKLNSLEPEIIGRLLRRAVDDGEKGLRKSXXXX 182 G+I+FIGATTENPSFHLITPLLSRCRVL LN L+P + LLRRAVDD E+GL S Sbjct: 225 GSILFIGATTENPSFHLITPLLSRCRVLTLNPLKPNHVETLLRRAVDDSERGLSNSVEVD 284 Query: 183 XXXXXXXXXXXLSLNSDGDARVXXXXXXXXXXXXXXRELSSKDKGTLVSFQTEDVTFDNS 362 L+ N DGDARV + S Sbjct: 285 DSVIEF-----LAYNCDGDARVALN------------------------------ALEIS 309 Query: 363 SLVPFNGLGSGENGVGSLAAVVTLDDAKEALQCKHLAYDRAGEEHYNLISALHKSLRGSD 542 + + GS AVV++DDAKEALQCKHLAYD+AG++HYNLISALHKS+RG D Sbjct: 310 ATMATARAGSD--------AVVSIDDAKEALQCKHLAYDKAGDQHYNLISALHKSMRGGD 361 Query: 543 ANASIYWLARMLEGGEHPLYIARRLVRFASEDVGL 647 ANA+IYWLARMLEGGE PLYIARRL+RFASED+GL Sbjct: 362 ANAAIYWLARMLEGGEEPLYIARRLIRFASEDIGL 396