BLASTX nr result

ID: Coptis24_contig00003901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003901
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535910.1| PREDICTED: transcriptional corepressor LEUNI...   224   6e-57
gb|ADG58005.1| transcription factor [Lycoris longituba]               223   2e-56
ref|XP_003607636.1| Transcriptional corepressor LEUNIG [Medicago...   220   1e-55
ref|XP_003590232.1| Transcriptional corepressor LEUNIG [Medicago...   220   1e-55
ref|XP_003518997.1| PREDICTED: transcriptional corepressor LEUNI...   218   4e-55

>ref|XP_003535910.1| PREDICTED: transcriptional corepressor LEUNIG-like [Glycine max]
          Length = 806

 Score =  224 bits (571), Expect = 6e-57
 Identities = 111/143 (77%), Positives = 128/143 (89%), Gaps = 5/143 (3%)
 Frame = +3

Query: 54  SATRQLQQEEME----LGSLDDHVESFL-QDDGDGRDLFGTLKRSPTEHSTESSKGFSFS 218
           S+T QL Q++ME    +GSL+D+VESFL QDDGDGRDLFGTLKR+P+EH+T++SKGFSFS
Sbjct: 461 SSTNQLLQDDMEHFGDVGSLEDNVESFLSQDDGDGRDLFGTLKRNPSEHATDASKGFSFS 520

Query: 219 EVGCMPTSTGKVVCCHFSSDGKLLASAGHEKKAVLWNMDTLQTESTPEEHALFITDVRFR 398
           EVG +  S  KVVCCHFSSDGKLLASAGH+KK VLWNM+TLQTESTPEEH+L ITDVRFR
Sbjct: 521 EVGSIRKSNSKVVCCHFSSDGKLLASAGHDKKVVLWNMETLQTESTPEEHSLIITDVRFR 580

Query: 399 PNSTQLATSSFDRTVRLWNAAEP 467
           PNSTQLATSSFD TVRLW+AA+P
Sbjct: 581 PNSTQLATSSFDTTVRLWDAADP 603


>gb|ADG58005.1| transcription factor [Lycoris longituba]
          Length = 282

 Score =  223 bits (567), Expect = 2e-56
 Identities = 110/155 (70%), Positives = 127/155 (81%), Gaps = 5/155 (3%)
 Frame = +3

Query: 27  DGPNATVFLSATRQLQQEEM--ELGSLDDHVESFLQ---DDGDGRDLFGTLKRSPTEHST 191
           DGP      S++ Q+   E   ++GSLDD+VESFL    DDGDGRD+F  LKRSPTEH+ 
Sbjct: 5   DGPGGLA--SSSNQMDDLEHFGDVGSLDDNVESFLSSHHDDGDGRDIFAALKRSPTEHNL 62

Query: 192 ESSKGFSFSEVGCMPTSTGKVVCCHFSSDGKLLASAGHEKKAVLWNMDTLQTESTPEEHA 371
           E SKGF+F+E GC  TST KVVCCHFSSDGK+LASAGHEKKA+LWNM+TLQTESTPE+H+
Sbjct: 63  EPSKGFTFNEAGCNRTSTNKVVCCHFSSDGKILASAGHEKKAILWNMETLQTESTPEDHS 122

Query: 372 LFITDVRFRPNSTQLATSSFDRTVRLWNAAEPAKC 476
           L ITD+RFRPNS QLATSSFDRTVRLWNAAEP+ C
Sbjct: 123 LIITDIRFRPNSMQLATSSFDRTVRLWNAAEPSYC 157


>ref|XP_003607636.1| Transcriptional corepressor LEUNIG [Medicago truncatula]
           gi|355508691|gb|AES89833.1| Transcriptional corepressor
           LEUNIG [Medicago truncatula]
          Length = 787

 Score =  220 bits (560), Expect = 1e-55
 Identities = 109/144 (75%), Positives = 126/144 (87%), Gaps = 5/144 (3%)
 Frame = +3

Query: 54  SATRQLQQEEME----LGSLDDHVESFL-QDDGDGRDLFGTLKRSPTEHSTESSKGFSFS 218
           S+T QL Q+ ME    +GSLDD+VESFL QDDGDG+DLFGTLKR+P EH+T+SSKGFSFS
Sbjct: 442 SSTNQLLQDGMEHFGDVGSLDDNVESFLSQDDGDGKDLFGTLKRNPAEHATDSSKGFSFS 501

Query: 219 EVGCMPTSTGKVVCCHFSSDGKLLASAGHEKKAVLWNMDTLQTESTPEEHALFITDVRFR 398
           EV  +  S GKVVCCHFSSDGKLLASAGH+KK VLWNM+TL+T+STPEEH + ITDVRFR
Sbjct: 502 EVSSIRKSNGKVVCCHFSSDGKLLASAGHDKKVVLWNMETLKTQSTPEEHTVIITDVRFR 561

Query: 399 PNSTQLATSSFDRTVRLWNAAEPA 470
           PNSTQLATSSFD TVRLW+AA+P+
Sbjct: 562 PNSTQLATSSFDTTVRLWDAADPS 585


>ref|XP_003590232.1| Transcriptional corepressor LEUNIG [Medicago truncatula]
           gi|355479280|gb|AES60483.1| Transcriptional corepressor
           LEUNIG [Medicago truncatula]
          Length = 786

 Score =  220 bits (560), Expect = 1e-55
 Identities = 109/144 (75%), Positives = 126/144 (87%), Gaps = 5/144 (3%)
 Frame = +3

Query: 54  SATRQLQQEEME----LGSLDDHVESFL-QDDGDGRDLFGTLKRSPTEHSTESSKGFSFS 218
           S+T QL Q+ ME    +GSLDD+VESFL QDDGDG+DLFGTLKR+P EH+T+SSKGFSFS
Sbjct: 441 SSTNQLLQDGMEHFGDVGSLDDNVESFLSQDDGDGKDLFGTLKRNPAEHATDSSKGFSFS 500

Query: 219 EVGCMPTSTGKVVCCHFSSDGKLLASAGHEKKAVLWNMDTLQTESTPEEHALFITDVRFR 398
           EV  +  S GKVVCCHFSSDGKLLASAGH+KK VLWNM+TL+T+STPEEH + ITDVRFR
Sbjct: 501 EVSSIRKSNGKVVCCHFSSDGKLLASAGHDKKVVLWNMETLKTQSTPEEHTVIITDVRFR 560

Query: 399 PNSTQLATSSFDRTVRLWNAAEPA 470
           PNSTQLATSSFD TVRLW+AA+P+
Sbjct: 561 PNSTQLATSSFDTTVRLWDAADPS 584


>ref|XP_003518997.1| PREDICTED: transcriptional corepressor LEUNIG-like [Glycine max]
          Length = 784

 Score =  218 bits (555), Expect = 4e-55
 Identities = 108/141 (76%), Positives = 124/141 (87%), Gaps = 3/141 (2%)
 Frame = +3

Query: 54  SATRQLQQEEM--ELGSLDDHVESFL-QDDGDGRDLFGTLKRSPTEHSTESSKGFSFSEV 224
           S+T QL   E   ++GSL+D+VESFL QDDGDGRDLFGTLKR+P+EH+T++SKGFSF EV
Sbjct: 440 SSTNQLDDMEHFGDVGSLEDNVESFLSQDDGDGRDLFGTLKRNPSEHATDASKGFSFDEV 499

Query: 225 GCMPTSTGKVVCCHFSSDGKLLASAGHEKKAVLWNMDTLQTESTPEEHALFITDVRFRPN 404
           G +  S  KVVCCHFSSDGKLLASAGH+KK VLWNM+TLQTESTPEEH+L ITDVRFRPN
Sbjct: 500 GSIRKSNSKVVCCHFSSDGKLLASAGHDKKVVLWNMETLQTESTPEEHSLIITDVRFRPN 559

Query: 405 STQLATSSFDRTVRLWNAAEP 467
           STQLATSSFD TVRLW+AA+P
Sbjct: 560 STQLATSSFDTTVRLWDAADP 580


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