BLASTX nr result

ID: Coptis24_contig00003890 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003890
         (806 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284935.1| PREDICTED: uncharacterized protein LOC100255...   187   3e-45
ref|XP_002514753.1| conserved hypothetical protein [Ricinus comm...   182   1e-43
ref|NP_201050.2| uncharacterized protein [Arabidopsis thaliana] ...   172   6e-41
ref|XP_002866491.1| hypothetical protein ARALYDRAFT_496421 [Arab...   172   6e-41
ref|XP_004154974.1| PREDICTED: uncharacterized protein LOC101228...   172   1e-40

>ref|XP_002284935.1| PREDICTED: uncharacterized protein LOC100255290 [Vitis vinifera]
          Length = 235

 Score =  187 bits (474), Expect = 3e-45
 Identities = 83/111 (74%), Positives = 97/111 (87%)
 Frame = -1

Query: 644 SLGPKKFASSVEMFNYFFKFVHYWPMNFDINKYEHMILLDLLRKGHPEPDKKIGAGISAF 465
           SLGPK F SSVEMF++FFKF+HYWP N D+NKYEHM+LLDLL+KGH EPDKKIG GI AF
Sbjct: 96  SLGPKTFGSSVEMFDHFFKFLHYWPANLDVNKYEHMMLLDLLKKGHTEPDKKIGGGIHAF 155

Query: 464 QIRVHPMWKSRCFFVIREDETVDDFSFRKCIDCILPLPEEMRVNSDANKAL 312
           Q+R HP++KSRCFFVIR+DE+VDDFSFRKC+D I PLPE M+  S+ NKAL
Sbjct: 156 QVRYHPVFKSRCFFVIRDDESVDDFSFRKCVDHISPLPENMKAKSEVNKAL 206


>ref|XP_002514753.1| conserved hypothetical protein [Ricinus communis]
           gi|223546357|gb|EEF47859.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 224

 Score =  182 bits (461), Expect = 1e-43
 Identities = 76/108 (70%), Positives = 94/108 (87%)
 Frame = -1

Query: 644 SLGPKKFASSVEMFNYFFKFVHYWPMNFDINKYEHMILLDLLRKGHPEPDKKIGAGISAF 465
           SLGPK F SSVEMF+YF+  +HYWP N  +NKYEHM+LL+LL+KGH +P+KKIG GI AF
Sbjct: 84  SLGPKSFGSSVEMFDYFYNLLHYWPPNLTVNKYEHMVLLELLKKGHSDPEKKIGGGIQAF 143

Query: 464 QIRVHPMWKSRCFFVIREDETVDDFSFRKCIDCILPLPEEMRVNSDAN 321
           Q+R HPMWKSRCFF+IR+D+T+DDFSFRKC+D ILPLPE+M++ SD N
Sbjct: 144 QVRYHPMWKSRCFFLIRDDDTMDDFSFRKCVDKILPLPEDMKIKSDGN 191


>ref|NP_201050.2| uncharacterized protein [Arabidopsis thaliana]
           gi|20385491|gb|AAM21312.1|AF371327_1 EMB514 [Arabidopsis
           thaliana] gi|21593438|gb|AAM65405.1| unknown
           [Arabidopsis thaliana] gi|30793885|gb|AAP40395.1|
           unknown protein [Arabidopsis thaliana]
           gi|30794104|gb|AAP40494.1| unknown protein [Arabidopsis
           thaliana] gi|51968752|dbj|BAD43068.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|110739286|dbj|BAF01556.1| hypothetical protein
           [Arabidopsis thaliana] gi|332010225|gb|AED97608.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 202

 Score =  172 bits (437), Expect = 6e-41
 Identities = 71/101 (70%), Positives = 88/101 (87%)
 Frame = -1

Query: 641 LGPKKFASSVEMFNYFFKFVHYWPMNFDINKYEHMILLDLLRKGHPEPDKKIGAGISAFQ 462
           LGPK+F +SV MF+YF KF+H+WP + D+NKYEHM+LLDL++KGH EP+KKIG GI  FQ
Sbjct: 69  LGPKEFVTSVAMFDYFVKFLHFWPTDLDVNKYEHMVLLDLIKKGHSEPEKKIGGGIKTFQ 128

Query: 461 IRVHPMWKSRCFFVIREDETVDDFSFRKCIDCILPLPEEMR 339
           +R HPMWKSRCFF++RED+T DDFSFRKC+D ILPLPE M+
Sbjct: 129 VRTHPMWKSRCFFLVREDDTADDFSFRKCVDQILPLPENMK 169


>ref|XP_002866491.1| hypothetical protein ARALYDRAFT_496421 [Arabidopsis lyrata subsp.
           lyrata] gi|297312326|gb|EFH42750.1| hypothetical protein
           ARALYDRAFT_496421 [Arabidopsis lyrata subsp. lyrata]
          Length = 203

 Score =  172 bits (437), Expect = 6e-41
 Identities = 71/101 (70%), Positives = 88/101 (87%)
 Frame = -1

Query: 641 LGPKKFASSVEMFNYFFKFVHYWPMNFDINKYEHMILLDLLRKGHPEPDKKIGAGISAFQ 462
           LGPK+F +SV MF+YF KF+H+WP + D+NKYEHM+LLDL++KGH EP+KKIG GI  FQ
Sbjct: 69  LGPKEFVTSVAMFDYFVKFLHFWPTDLDVNKYEHMVLLDLIKKGHSEPEKKIGGGIKTFQ 128

Query: 461 IRVHPMWKSRCFFVIREDETVDDFSFRKCIDCILPLPEEMR 339
           +R HPMWKSRCFF++RED+T DDFSFRKC+D ILPLPE M+
Sbjct: 129 VRTHPMWKSRCFFLVREDDTADDFSFRKCVDHILPLPENMK 169


>ref|XP_004154974.1| PREDICTED: uncharacterized protein LOC101228008 [Cucumis sativus]
          Length = 232

 Score =  172 bits (435), Expect = 1e-40
 Identities = 74/111 (66%), Positives = 94/111 (84%)
 Frame = -1

Query: 644 SLGPKKFASSVEMFNYFFKFVHYWPMNFDINKYEHMILLDLLRKGHPEPDKKIGAGISAF 465
           SLGPK F SSVE+F+YF+K +H+WP+N ++N+YE M+L+DLL+KGH EP+KKIG GI +F
Sbjct: 96  SLGPKSFRSSVELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSF 155

Query: 464 QIRVHPMWKSRCFFVIREDETVDDFSFRKCIDCILPLPEEMRVNSDANKAL 312
           QIR HP WKS+CFF+IREDE+ DDFSFRKC+D ILPLPE  +   DAN+AL
Sbjct: 156 QIRFHPEWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKGKFDANRAL 206


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