BLASTX nr result

ID: Coptis24_contig00003869 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003869
         (1255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273794.1| PREDICTED: PRA1 family protein A2 isoform 1 ...   371   e-100
ref|XP_002458760.1| hypothetical protein SORBIDRAFT_03g039810 [S...   370   e-100
emb|CAN72272.1| hypothetical protein VITISV_025566 [Vitis vinifera]   369   e-100
ref|NP_001044801.2| Os01g0847900 [Oryza sativa Japonica Group] g...   367   4e-99
ref|XP_003552205.1| PREDICTED: PRA1 family protein A1-like [Glyc...   366   8e-99

>ref|XP_002273794.1| PREDICTED: PRA1 family protein A2 isoform 1 [Vitis vinifera]
            gi|359481732|ref|XP_003632665.1| PREDICTED: PRA1 family
            protein A2 isoform 2 [Vitis vinifera]
            gi|297740305|emb|CBI30487.3| unnamed protein product
            [Vitis vinifera]
          Length = 209

 Score =  371 bits (952), Expect = e-100
 Identities = 174/209 (83%), Positives = 195/209 (93%)
 Frame = -1

Query: 1039 MDWGNVTAEDLMDALREVDWSSPPRPLTEFFSRFTLPRSISRWNSRLKCNLYYYRTNYFI 860
            MDWGNVTAEDL+DALREVDWS+PPRPL+EFFSRFTLPRS S+W+SRLKCN YYYRTNYFI
Sbjct: 1    MDWGNVTAEDLIDALREVDWSTPPRPLSEFFSRFTLPRSYSKWSSRLKCNFYYYRTNYFI 60

Query: 859  MLIFILGIAFLRRPMAIIAAIFTALSIAFLNDSFAVSFNEKVTRTVRQFSPHLAAKMRPP 680
            M++FILG+ FLRRP+AI+AA  TALSIAFLNDSFA +F+EKVTRTVRQFSPHLAAKMRPP
Sbjct: 61   MIVFILGMGFLRRPIAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHLAAKMRPP 120

Query: 679  MAPVIRGRPSAKRAIHICGRPRWMFVLLFAAASCIIWFTSCRLLTVLWAFIIGLLATILH 500
            + PVIRGRPSAKR+I ICGRPRW+FVL+F++ S I+WF SC +LTVLWA  IGLLATILH
Sbjct: 121  LTPVIRGRPSAKRSILICGRPRWVFVLIFSSVSFILWFVSCSILTVLWALAIGLLATILH 180

Query: 499  ASFRTPNLKARLNTFREEFRAVWRNYSDL 413
            ASFRTPNLKARLNTFREEFRAVWRNYS+L
Sbjct: 181  ASFRTPNLKARLNTFREEFRAVWRNYSEL 209


>ref|XP_002458760.1| hypothetical protein SORBIDRAFT_03g039810 [Sorghum bicolor]
            gi|241930735|gb|EES03880.1| hypothetical protein
            SORBIDRAFT_03g039810 [Sorghum bicolor]
          Length = 209

 Score =  370 bits (950), Expect = e-100
 Identities = 169/209 (80%), Positives = 196/209 (93%)
 Frame = -1

Query: 1039 MDWGNVTAEDLMDALREVDWSSPPRPLTEFFSRFTLPRSISRWNSRLKCNLYYYRTNYFI 860
            MDW +VTAEDL+DALREVDWS+PPRP++EFFSRFT PRS S+W SRLKCNLYYYRTNYFI
Sbjct: 1    MDWSSVTAEDLVDALREVDWSTPPRPVSEFFSRFTAPRSYSKWTSRLKCNLYYYRTNYFI 60

Query: 859  MLIFILGIAFLRRPMAIIAAIFTALSIAFLNDSFAVSFNEKVTRTVRQFSPHLAAKMRPP 680
            ++IF+LG+ FLR+P+AI+AA+ T LSIAFLNDSFAV+FNEK+TR+VRQFSPHLAAKMRPP
Sbjct: 61   LIIFLLGMGFLRKPVAILAALATGLSIAFLNDSFAVTFNEKITRSVRQFSPHLAAKMRPP 120

Query: 679  MAPVIRGRPSAKRAIHICGRPRWMFVLLFAAASCIIWFTSCRLLTVLWAFIIGLLATILH 500
            + PVIRGRPS +R+IHICGRPRW+FVLLF+A SC++W TSC LLTVLWA +IGLLAT+LH
Sbjct: 121  ITPVIRGRPSKRRSIHICGRPRWIFVLLFSAVSCVLWLTSCSLLTVLWALLIGLLATLLH 180

Query: 499  ASFRTPNLKARLNTFREEFRAVWRNYSDL 413
            ASFRTPNLKARLNTFREEFRAVWRNYS+L
Sbjct: 181  ASFRTPNLKARLNTFREEFRAVWRNYSEL 209


>emb|CAN72272.1| hypothetical protein VITISV_025566 [Vitis vinifera]
          Length = 209

 Score =  369 bits (948), Expect = e-100
 Identities = 173/209 (82%), Positives = 194/209 (92%)
 Frame = -1

Query: 1039 MDWGNVTAEDLMDALREVDWSSPPRPLTEFFSRFTLPRSISRWNSRLKCNLYYYRTNYFI 860
            MDWGNVTAEDL+DALREVDWS+PPRPL+EFFSRFTLPRS S+W+SRLKCN YYYRTNYFI
Sbjct: 1    MDWGNVTAEDLIDALREVDWSTPPRPLSEFFSRFTLPRSYSKWSSRLKCNFYYYRTNYFI 60

Query: 859  MLIFILGIAFLRRPMAIIAAIFTALSIAFLNDSFAVSFNEKVTRTVRQFSPHLAAKMRPP 680
            M++FILG+ FLRRP+AI+AA  TALSIAFLNDSFA +F+EKVTRTVRQFSPHLAAKMRPP
Sbjct: 61   MIVFILGMGFLRRPIAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHLAAKMRPP 120

Query: 679  MAPVIRGRPSAKRAIHICGRPRWMFVLLFAAASCIIWFTSCRLLTVLWAFIIGLLATILH 500
            + PVIRGRPSAKR+I ICGRPRW+FVL+F++ S I+WF SC +LTVLWA  IGLL TILH
Sbjct: 121  LTPVIRGRPSAKRSILICGRPRWVFVLIFSSVSFILWFVSCSILTVLWALAIGLLGTILH 180

Query: 499  ASFRTPNLKARLNTFREEFRAVWRNYSDL 413
            ASFRTPNLKARLNTFREEFRAVWRNYS+L
Sbjct: 181  ASFRTPNLKARLNTFREEFRAVWRNYSEL 209


>ref|NP_001044801.2| Os01g0847900 [Oryza sativa Japonica Group]
            gi|56784039|dbj|BAD82667.1| unknown protein [Oryza sativa
            Japonica Group] gi|215707108|dbj|BAG93568.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|215765436|dbj|BAG87133.1| unnamed protein product
            [Oryza sativa Japonica Group] gi|218189374|gb|EEC71801.1|
            hypothetical protein OsI_04430 [Oryza sativa Indica
            Group] gi|222619537|gb|EEE55669.1| hypothetical protein
            OsJ_04073 [Oryza sativa Japonica Group]
            gi|255673874|dbj|BAF06715.2| Os01g0847900 [Oryza sativa
            Japonica Group]
          Length = 209

 Score =  367 bits (941), Expect = 4e-99
 Identities = 168/208 (80%), Positives = 193/208 (92%)
 Frame = -1

Query: 1039 MDWGNVTAEDLMDALREVDWSSPPRPLTEFFSRFTLPRSISRWNSRLKCNLYYYRTNYFI 860
            MDW +VTAEDL+DALREVDWS+PPRP++EFFSRFT PRS S+W SRLKCNLYYYRTNYFI
Sbjct: 1    MDWSSVTAEDLVDALREVDWSTPPRPVSEFFSRFTAPRSYSKWTSRLKCNLYYYRTNYFI 60

Query: 859  MLIFILGIAFLRRPMAIIAAIFTALSIAFLNDSFAVSFNEKVTRTVRQFSPHLAAKMRPP 680
            +++FILG+ FLR+P++I+AA  T LSIAFLNDSFAV+FNEKVTRTVRQFSPHLAAKMRPP
Sbjct: 61   LIMFILGMGFLRKPVSILAAFSTGLSIAFLNDSFAVTFNEKVTRTVRQFSPHLAAKMRPP 120

Query: 679  MAPVIRGRPSAKRAIHICGRPRWMFVLLFAAASCIIWFTSCRLLTVLWAFIIGLLATILH 500
            + PVIRGRPS+KR+IHICGRPRW+FV+LF+  SC +W TSC LLTVLWA I+GLLAT+LH
Sbjct: 121  LRPVIRGRPSSKRSIHICGRPRWVFVVLFSVVSCFLWMTSCSLLTVLWALIVGLLATLLH 180

Query: 499  ASFRTPNLKARLNTFREEFRAVWRNYSD 416
            ASFRTPNLKARLNTFREEFRAVWRNYS+
Sbjct: 181  ASFRTPNLKARLNTFREEFRAVWRNYSE 208


>ref|XP_003552205.1| PREDICTED: PRA1 family protein A1-like [Glycine max]
          Length = 209

 Score =  366 bits (939), Expect = 8e-99
 Identities = 172/209 (82%), Positives = 195/209 (93%)
 Frame = -1

Query: 1039 MDWGNVTAEDLMDALREVDWSSPPRPLTEFFSRFTLPRSISRWNSRLKCNLYYYRTNYFI 860
            MDWGNVTAEDL+DALREVDWSSPPRPL+EFFSRFT+PRS S+WNSRLKCNLYYYRTNYFI
Sbjct: 1    MDWGNVTAEDLIDALREVDWSSPPRPLSEFFSRFTVPRSSSKWNSRLKCNLYYYRTNYFI 60

Query: 859  MLIFILGIAFLRRPMAIIAAIFTALSIAFLNDSFAVSFNEKVTRTVRQFSPHLAAKMRPP 680
            +++ +L + FLRRP+AI+AA+ TALSIAFLNDSFA +F+EKVTRTVRQFSPHLAAKMRPP
Sbjct: 61   LIVSVLILGFLRRPLAIVAALLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHLAAKMRPP 120

Query: 679  MAPVIRGRPSAKRAIHICGRPRWMFVLLFAAASCIIWFTSCRLLTVLWAFIIGLLATILH 500
            + PVIRGRPS+KRAI+ICGRPRW+FVL+F++AS  +WF S  LLTVLWA  IGLLATILH
Sbjct: 121  LTPVIRGRPSSKRAIYICGRPRWVFVLIFSSASFFLWFVSAGLLTVLWALAIGLLATILH 180

Query: 499  ASFRTPNLKARLNTFREEFRAVWRNYSDL 413
            ASFRTPNLKARLNTFREEFRAVWRNYS+L
Sbjct: 181  ASFRTPNLKARLNTFREEFRAVWRNYSEL 209


Top