BLASTX nr result
ID: Coptis24_contig00003849
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00003849
(2997 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI18867.3| unnamed protein product [Vitis vinifera] 709 0.0
gb|ADI58371.1| pentatricopeptide repeat-containing protein [Caps... 626 e-177
ref|XP_004139754.1| PREDICTED: pentatricopeptide repeat-containi... 615 e-173
ref|XP_004161905.1| PREDICTED: pentatricopeptide repeat-containi... 609 e-171
ref|XP_002889073.1| pentatricopeptide repeat-containing protein ... 601 e-169
>emb|CBI18867.3| unnamed protein product [Vitis vinifera]
Length = 804
Score = 709 bits (1830), Expect = 0.0
Identities = 391/790 (49%), Positives = 507/790 (64%)
Frame = -2
Query: 2879 KSVTSCLQSQIVSALQVGDRDRAFKFLTAFTSSSNQILKPDDFIHILNYCATSPDTVFFM 2700
KS+T LQ QIV AL+ +R RA L+ N L+ DDFI+IL +C+ SPD +F M
Sbjct: 54 KSITRLLQVQIVDALRSNERSRASSLLSEL-GRGNYSLRADDFIYILEHCSKSPDPLFVM 112
Query: 2699 ETWRIMEEKEIEMDTRCYRSIIQALTKGGYLEEALNWLSFLGSSPHSAPDLSMYNIFLNG 2520
E WRIM+EKE+ ++ RCY IQAL KGGYLEEA N L+F+G + P L MYN FL G
Sbjct: 113 EIWRIMDEKEVHVNNRCYMLSIQALCKGGYLEEAFNLLNFVGENHDIHPILPMYNNFLRG 172
Query: 2519 CAQMGSMVHANSCLDLMENRLVGKSESTYLALLKLAVLQESLSAVQEIWKQYTKYYCPNI 2340
C Q S++HAN CLDLME++++GK+E TY LKLAVLQ++LSA +IWK+Y YY +I
Sbjct: 173 CVQTRSLLHANQCLDLMEHQVLGKNEVTYSQFLKLAVLQQNLSAAHKIWKEYMTYYSMSI 232
Query: 2339 RSLQEFIRSFARLGDLVTALKALQHAVVLVFQGNASIERPVKGSFQSSRLDIPIPSTIDF 2160
SL++FI SF RL DL +A ALQH V LVF+G+ I + +G SSRLDIPIP D
Sbjct: 233 ISLRKFIWSFTRLRDLESAYAALQHMVDLVFKGSIFINKSAEGRLCSSRLDIPIPKNGDM 292
Query: 2159 AFKGSSMEENSLSLHPSPVLGAMTRAVEGTGCRSSALFTVTNKEQNHSRELAHGSSDILN 1980
K MEEN SL + N + +H S
Sbjct: 293 GLK-RCMEENEHSL--------------------------PSVSDNSKKIDSHAS----- 320
Query: 1979 NGIDAMHAMKILRLSFNDVIQACAQARKCKLAEQLFLEMRKLGLEPDSHTFNGLIRAVVN 1800
M MK+LR SF+DVI ACAQ + C LAEQL L+M+ LGLEP HT++GLI+A+V+
Sbjct: 321 -----MPVMKVLRWSFSDVIYACAQTQNCGLAEQLILQMQNLGLEPSCHTYDGLIKAIVS 375
Query: 1799 KRGVREGLKLLKAMEEMNLKPCNATLRMLSISCSKVXXXXXXXXXXDQAVESPCIQPFNC 1620
RG +G+++LK M+ NLKP ++TL LSI SK DQ + PFN
Sbjct: 376 DRGFSDGMEVLKTMQLRNLKPYDSTLAALSIGSSKALQLDLAESLLDQISRISYVHPFNA 435
Query: 1619 LLAACDVVDQPERAVRXXXXXXXXXXXSNMETYELLFSLFGNVNAPYKKGDIFSRVDVAK 1440
LAACD +DQPERAV N+ TYELLFSLFGNVNAPY++G++ S+VDVA+
Sbjct: 436 FLAACDTLDQPERAVPILSKMKQLKLQPNVGTYELLFSLFGNVNAPYEEGNMLSQVDVAR 495
Query: 1439 RISAIEMDMLKNGLQHSHSSMVNLLKALGAEGMIKELIHYLSVAKTQFFLANTMEGTIIY 1260
RI AIEMDM+ NG+QHSH SM NLLKALGAEGMI+EL+ YL VA+ QFF NT GT IY
Sbjct: 496 RIKAIEMDMMNNGIQHSHLSMKNLLKALGAEGMIRELMQYLHVAENQFFRTNTYLGTPIY 555
Query: 1259 NSVLYSLFEADEARMAFQVFKYMKLHDIPPDGLTYNIMIDCCGAISSSKIASMFLSMMLR 1080
N+VL+SL EA E+ +A ++FK M +P D TYNIMIDCC I K A +SMM+R
Sbjct: 556 NTVLHSLVEAKESHIAIEIFKNMISRSLPRDAATYNIMIDCCSTIKCYKSACALVSMMMR 615
Query: 1079 DGFSPQKYTYKSLIKIMLGKDNYRKAYWLLYQMSSEGIQPDVVVFNAILKKAFMEGRLRI 900
DGF P TY +LIKI+L ++++ +A LL Q E I DV+++N IL+KA ++GR+ +
Sbjct: 616 DGFLPWTLTYTALIKILLEREDFDEALNLLDQARLEEIPSDVLLYNTILQKACLKGRIDL 675
Query: 899 AELIVERMHRMKVQPDPETCYLLYHAYVRSQKHGTALEALQVLSMRMISEEQSVLQKNRK 720
EL+ E+MH+ K+QPDP TCY ++ +YV TALE+LQVLSMRMISE+ S L++ R
Sbjct: 676 IELVAEQMHQEKIQPDPSTCYYVFSSYVDGGFFSTALESLQVLSMRMISEDNSTLEEKRT 735
Query: 719 YFEDNFVLAEDSEAELRIIKIFKDSISTKHYKKEIFEDCGDYLATALLYLRWCALAGMSI 540
ED F+ +ED +AE +I++ FK S + LA ALL LRWCA++G I
Sbjct: 736 ELED-FIHSEDKDAESQILQFFKGS--------------DENLAIALLNLRWCAISGSPI 780
Query: 539 SWSPDEGIWA 510
SW+P+E +WA
Sbjct: 781 SWTPNESLWA 790
>gb|ADI58371.1| pentatricopeptide repeat-containing protein [Capsicum annuum]
Length = 805
Score = 626 bits (1615), Expect = e-177
Identities = 363/819 (44%), Positives = 497/819 (60%), Gaps = 2/819 (0%)
Frame = -2
Query: 2939 EEVSGGTMFSRGYSDSEGTT-KSVTSCLQSQIVSALQVGDRDRAFKFLTAFTSSSNQILK 2763
+E G R ++ S G + V+ Q +IV AL G++ RA + L F+ +N+ L
Sbjct: 28 KEAGGYNQAMRSFTSSIGHVGEPVSRSGQKKIVDALVSGEKSRAVRLLYEFSLGNNK-LS 86
Query: 2762 PDDFIHILNYCATSPDTVFFMETWRIMEEKEIEMDTRCYRSIIQALTKGGYLEEALNWLS 2583
+DF IL CA PD +F ME WRIMEEKEI + +CY ++AL KGGYL+EAL+ ++
Sbjct: 87 ANDFASILQSCARLPDPLFVMEIWRIMEEKEINISDKCYSLAVRALCKGGYLKEALSLMN 146
Query: 2582 FLGSSPHSAPDLSMYNIFLNGCAQMGSMVHANSCLDLMENRLVGKSESTYLALLKLAVLQ 2403
+G + + L +YN FL C + S+ +A+ C+DLME+++VGK+E TY LLKLAVLQ
Sbjct: 147 IMGENLNCYSMLPIYNNFLAACYETQSVDYASKCMDLMEHQMVGKNEITYAQLLKLAVLQ 206
Query: 2402 ESLSAVQEIWKQYTKYYCPNIRSLQEFIRSFARLGDLVTALKALQHAVVLVFQGNASIER 2223
++LSAV EIWK+ K+Y +I SL++FI SF LGDL +A ALQH V L F+ + I R
Sbjct: 207 QNLSAVHEIWKECIKFYSLSIISLRKFIWSFTELGDLESAYTALQHMVRLAFR-DCDISR 265
Query: 2222 PVKGSFQSSRLDIPIPSTIDFAFKGSSMEENSLSLHPSPVLGAMTRAVEGTGCRSSALFT 2043
+G F RLDIP PST ++F S++ + G+ +E + + T
Sbjct: 266 TAEGRFCDVRLDIPAPSTGSWSFIDVSLD----------IEGSSNFDIESQSLGNMEIST 315
Query: 2042 VTNKEQNHSRELAHGSSDILNNGIDAMHAMKILRLSFNDVIQACAQARKCKLAEQLFLEM 1863
V K + MK+LR SFNDV+ ACA+ + C LAEQL L+M
Sbjct: 316 VRKKL--------------------SASVMKLLRWSFNDVMHACAKVQNCDLAEQLILQM 355
Query: 1862 RKLGLEPDSHTFNGLIRAVVNKRGVREGLKLLKAMEEMNLKPCNATLRMLSISCSKVXXX 1683
+ LGL+P T++G IRA+ RG EG+++LK M E N+KP ++TL +L+I CS+
Sbjct: 356 QTLGLQPSGSTYDGFIRAIATTRGFSEGVEVLKVMREENIKPRDSTLAVLAIICSRELEL 415
Query: 1682 XXXXXXXDQAVESPCIQPFNCLLAACDVVDQPERAVRXXXXXXXXXXXSNMETYELLFSL 1503
D+ E P N L ACDV+D+PERAV+ N+ TYELLFSL
Sbjct: 416 DLAESFLDEIYEIRSPHPCNAFLEACDVLDRPERAVQIFAKMKKLNLQPNIRTYELLFSL 475
Query: 1502 FGNVNAPYKKGDIFSRVDVAKRISAIEMDMLKNGLQHSHSSMVNLLKALGAEGMIKELIH 1323
FGNVNAPY++G++ S+VDVAKRI+AIEMDM+ NGLQHSH S+ N LKALG EGMIKELI
Sbjct: 476 FGNVNAPYEEGNMLSQVDVAKRINAIEMDMMINGLQHSHLSLKNELKALGTEGMIKELIQ 535
Query: 1322 YLSVAKTQFFLANTMEGTIIYNSVLYSLFEADEARMAFQVFKYMKLHDIPPDGLTYNIMI 1143
YL A+ +F +T T +YN+VL+SL EA E++MA ++FK M +PPD TYNIMI
Sbjct: 536 YLHAAENRFSRYDTYMITPVYNTVLHSLVEAKESQMATKMFKSMVSSGVPPDAATYNIMI 595
Query: 1142 DCCGAISSSKIASMFLSMMLRDGFSPQKYTYKSLIKIMLGKDNYRKAYWLLYQMSSEGIQ 963
DCC I + A +SMM R+GF+P+ T L+KI+L +++ LL Q SEGIQ
Sbjct: 596 DCCSIIGCFRSALALISMMFRNGFNPEAVTLTGLLKILLRSEDFDGTLKLLNQGISEGIQ 655
Query: 962 PDVVVFNAILKKAFMEGRLRIAELIVERMHRMKVQPDPETCYLLYHAYVRSQKHGTALEA 783
DV++++ +L+ A +GR+ + ELIVE+MH V PDP TC ++ AYV + TA+EA
Sbjct: 656 LDVLLYDTVLQVASEKGRIDVIELIVEQMHLQGVLPDPSTCSHVFAAYVDHGFYNTAMEA 715
Query: 782 LQVLSMRMISEEQSVLQKNRKYFE-DNFVLAEDSEAELRIIKIFKDSISTKHYKKEIFED 606
LQVLS+RMI+ + K E +N +L EDSE E RI+K FKDS
Sbjct: 716 LQVLSVRMIA--GGFKDNDEKQTELENLILGEDSEDESRILKPFKDS------------- 760
Query: 605 CGDYLATALLYLRWCALAGMSISWSPDEGIWAMSQKNQL 489
+YL ALL LRWCA+ G +SWSP + WA + L
Sbjct: 761 -KEYLTVALLQLRWCAILGYPVSWSPSDSHWARRLSSNL 798
>ref|XP_004139754.1| PREDICTED: pentatricopeptide repeat-containing protein At1g76280-like
[Cucumis sativus]
Length = 834
Score = 615 bits (1585), Expect = e-173
Identities = 353/833 (42%), Positives = 502/833 (60%), Gaps = 9/833 (1%)
Frame = -2
Query: 2978 SITNTFRRY----HLREEEVSG-----GTMFSRGYSDSEGTTKSVTSCLQSQIVSALQVG 2826
SI ++ R+ H+R+++ S + S G S+ G T+ +Q QIV+AL++G
Sbjct: 25 SIADSIYRFKPHEHVRKQDASKLVFHRALLISSG-SEIWGNGAESTAFMQMQIVNALRLG 83
Query: 2825 DRDRAFKFLTAFTSSSNQILKPDDFIHILNYCATSPDTVFFMETWRIMEEKEIEMDTRCY 2646
DR RA L L D+F+ IL+YCA SPD +F METW+IMEE+ I ++ C
Sbjct: 84 DRSRASNLLMVLGQEKFS-LTADNFVRILSYCAKSPDPLFVMETWKIMEERGIFLNNTCS 142
Query: 2645 RSIIQALTKGGYLEEALNWLSFLGSSPHSAPDLSMYNIFLNGCAQMGSMVHANSCLDLME 2466
+I+AL KGGYL+EA ++FL S P L YN FL CA SMVHA+ CLDLM+
Sbjct: 143 LLMIEALCKGGYLDEAFGLINFLAESHVMFPALPAYNCFLRACAIRQSMVHASQCLDLMD 202
Query: 2465 NRLVGKSESTYLALLKLAVLQESLSAVQEIWKQYTKYYCPNIRSLQEFIRSFARLGDLVT 2286
+++VGK+E+TY LLKLAV Q++LS+V EIW+ + K Y P++ SL++FI S+AR+GD+ +
Sbjct: 203 HKMVGKNEATYSELLKLAVCQKNLSSVHEIWRDFVKNYSPSVSSLRKFIWSYARMGDVKS 262
Query: 2285 ALKALQHAVVLVFQGNASIERPVKGSFQSSRLDIPIPSTIDFAFKGSSMEENSLSLHPSP 2106
A ALQ V L N + R ++ LDIPIPS + + EE S+
Sbjct: 263 AYTALQKMVTL---NNGAAGRKLQS------LDIPIPSRTELYRYNFNFEEKEPSIDEFF 313
Query: 2105 VLGAMTRAVEGTGCRSSALFTVTNKEQNHSRELAHGSSDILNNGIDAMHAMKILRLSFND 1926
+ + G S + E+ G + NN + K+LR S ND
Sbjct: 314 YKKMVPWNGDVGGISVSGI---------KCGEVETGPLTVPNNH-KSSFVRKVLRWSSND 363
Query: 1925 VIQACAQARKCKLAEQLFLEMRKLGLEPDSHTFNGLIRAVVNKRGVREGLKLLKAMEEMN 1746
V++AC+ A C LAEQL +M KLGL+P SHTF+G +R+VV++RG G+++LK M++
Sbjct: 364 VMRACSLAGNCGLAEQLMQQMHKLGLQPSSHTFDGFVRSVVSERGFSAGMEILKVMQQRG 423
Query: 1745 LKPCNATLRMLSISCSKVXXXXXXXXXXDQAVESPCIQPFNCLLAACDVVDQPERAVRXX 1566
L+P ++TL +S+SCSK ++ P PFN +ACD++DQPERA+R
Sbjct: 424 LEPYDSTLAAVSVSCSKALELDLAEALLERLSACPYPYPFNAFFSACDMMDQPERAMRML 483
Query: 1565 XXXXXXXXXSNMETYELLFSLFGNVNAPYKKGDIFSRVDVAKRISAIEMDMLKNGLQHSH 1386
++ TYELL+SLFGNVNAPY++GD S+VD AKR+ IEMDM K+G+Q+SH
Sbjct: 484 VKMKQMKVAPDVRTYELLYSLFGNVNAPYEEGDNLSQVDAAKRVRMIEMDMGKHGIQYSH 543
Query: 1385 SSMVNLLKALGAEGMIKELIHYLSVAKTQFFLANTMEGTIIYNSVLYSLFEADEARMAFQ 1206
SM+NLLKALG EGM KE++ YL++A+ F+ NT G +YN+VL+ L ++ E MA +
Sbjct: 544 FSMMNLLKALGTEGMKKEVLQYLNLAENLFYYNNTSLGMPVYNTVLHFLVDSKETHMAIE 603
Query: 1205 VFKYMKLHDIPPDGLTYNIMIDCCGAISSSKIASMFLSMMLRDGFSPQKYTYKSLIKIML 1026
+F MK PD T+ +M+DCC I K A LS+M+R GF PQ TY SL+KI+L
Sbjct: 604 LFNNMKRSGFFPDAATFEMMLDCCSVIGCLKSAFALLSLMIRSGFCPQILTYTSLVKIVL 663
Query: 1025 GKDNYRKAYWLLYQMSSEGIQPDVVVFNAILKKAFMEGRLRIAELIVERMHRMKVQPDPE 846
G + + A LL Q SSEGI+ DV++ N I++KA + R+ + E +VE+M+R K+ PDP
Sbjct: 664 GFERFDDALNLLDQASSEGIELDVIIMNTIMRKACEKARIDVIEFLVEKMNREKIPPDPS 723
Query: 845 TCYLLYHAYVRSQKHGTALEALQVLSMRMISEEQSVLQKNRKYFEDNFVLAEDSEAELRI 666
TC ++ YV H TA+EALQVLSMRM+ E+ + + +NFVLAED+ A+ RI
Sbjct: 724 TCQNVFSTYVNLGYHSTAMEALQVLSMRMLLCEED--DASVTEYMENFVLAEDTGADSRI 781
Query: 665 IKIFKDSISTKHYKKEIFEDCGDYLATALLYLRWCALAGMSISWSPDEGIWAM 507
+ FK S +YL+ AL LRWCA+ G S+ +SP++ WAM
Sbjct: 782 AEFFKCS--------------REYLSFALFNLRWCAMLGYSVCYSPNQSPWAM 820
>ref|XP_004161905.1| PREDICTED: pentatricopeptide repeat-containing protein At1g76280-like
[Cucumis sativus]
Length = 806
Score = 609 bits (1570), Expect = e-171
Identities = 351/833 (42%), Positives = 498/833 (59%), Gaps = 9/833 (1%)
Frame = -2
Query: 2978 SITNTFRRY----HLREEEVSG-----GTMFSRGYSDSEGTTKSVTSCLQSQIVSALQVG 2826
SI ++ R+ H+R+++ S + S G S+ G T+ +Q QIV+AL++G
Sbjct: 25 SIADSIYRFKPHEHVRKQDASKLVFHRALLISSG-SEIWGNGAESTAFMQMQIVNALRLG 83
Query: 2825 DRDRAFKFLTAFTSSSNQILKPDDFIHILNYCATSPDTVFFMETWRIMEEKEIEMDTRCY 2646
DR RA L L D+F+ IL+YCA SPD +F METW+IMEE+ I ++ C
Sbjct: 84 DRSRASNLLMVLGQEKFS-LTADNFVRILSYCAKSPDPLFVMETWKIMEERGIFLNNTCS 142
Query: 2645 RSIIQALTKGGYLEEALNWLSFLGSSPHSAPDLSMYNIFLNGCAQMGSMVHANSCLDLME 2466
+I+AL KGGYL+EA ++FL S P L YN FL CA SMVHA+ CLDLM+
Sbjct: 143 LLMIEALCKGGYLDEAFGLINFLAESHVMFPALPAYNCFLRACAIRQSMVHASQCLDLMD 202
Query: 2465 NRLVGKSESTYLALLKLAVLQESLSAVQEIWKQYTKYYCPNIRSLQEFIRSFARLGDLVT 2286
+++VGK+E+TY LLKLAV Q++LS+V EIW+ + K Y P++ SL++FI S+AR+GD+ +
Sbjct: 203 HKMVGKNEATYSELLKLAVCQKNLSSVHEIWRDFVKNYSPSVSSLRKFIWSYARMGDVKS 262
Query: 2285 ALKALQHAVVLVFQGNASIERPVKGSFQSSRLDIPIPSTIDFAFKGSSMEENSLSLHPSP 2106
A ALQ V L N + R ++ LDIPIPS + ++G S
Sbjct: 263 AYTALQKMVTL---NNGAAGRKLQS------LDIPIPSRTEL-YRGIS------------ 300
Query: 2105 VLGAMTRAVEGTGCRSSALFTVTNKEQNHSRELAHGSSDILNNGIDAMHAMKILRLSFND 1926
V G C E+ G + NN + K+LR S ND
Sbjct: 301 --------VSGIKC----------------GEVETGPLTVPNNH-KSSFVRKVLRWSSND 335
Query: 1925 VIQACAQARKCKLAEQLFLEMRKLGLEPDSHTFNGLIRAVVNKRGVREGLKLLKAMEEMN 1746
V++AC+ A C LAEQL +M KLGL+P SHTF+G +R+VV++RG G+++LK M++
Sbjct: 336 VMRACSLAGNCGLAEQLMQQMHKLGLQPSSHTFDGFVRSVVSERGFSAGMEILKVMQQRG 395
Query: 1745 LKPCNATLRMLSISCSKVXXXXXXXXXXDQAVESPCIQPFNCLLAACDVVDQPERAVRXX 1566
L+P ++TL +S+SCSK ++ P PFN +ACD++DQPERA+R
Sbjct: 396 LEPYDSTLAAVSVSCSKALELDLAEALLERLSACPYPYPFNAFFSACDMMDQPERAMRML 455
Query: 1565 XXXXXXXXXSNMETYELLFSLFGNVNAPYKKGDIFSRVDVAKRISAIEMDMLKNGLQHSH 1386
++ TYELL+SLFGNVNAPY++GD S+VD AKR+ IEMDM K+G+Q+SH
Sbjct: 456 VKMKQMKVAPDVRTYELLYSLFGNVNAPYEEGDNLSQVDAAKRVRMIEMDMGKHGIQYSH 515
Query: 1385 SSMVNLLKALGAEGMIKELIHYLSVAKTQFFLANTMEGTIIYNSVLYSLFEADEARMAFQ 1206
SM+NLLKALG EGM KE++ YL++A+ F+ NT G +YN+VL+ L ++ E MA +
Sbjct: 516 FSMMNLLKALGTEGMKKEVLQYLNLAENLFYYNNTSLGMPVYNTVLHFLVDSKETHMAIE 575
Query: 1205 VFKYMKLHDIPPDGLTYNIMIDCCGAISSSKIASMFLSMMLRDGFSPQKYTYKSLIKIML 1026
+F MK PD T+ +M+DCC I K A LS+M+R GF PQ TY SL+KI+L
Sbjct: 576 LFNNMKRSGFFPDAATFEMMLDCCSVIGCLKSAFALLSLMIRSGFCPQILTYTSLVKIVL 635
Query: 1025 GKDNYRKAYWLLYQMSSEGIQPDVVVFNAILKKAFMEGRLRIAELIVERMHRMKVQPDPE 846
G + + A LL Q SSEGI+ DV++ N I++KA + R+ + E +VE+M+R K+ PDP
Sbjct: 636 GFERFDDALNLLDQASSEGIELDVIIMNTIMRKACEKARIDVIEFLVEKMNREKIPPDPS 695
Query: 845 TCYLLYHAYVRSQKHGTALEALQVLSMRMISEEQSVLQKNRKYFEDNFVLAEDSEAELRI 666
TC ++ YV H TA+EALQVLSMRM+ E+ + + +NFVLAED+ A+ RI
Sbjct: 696 TCQNVFSTYVNLGYHSTAMEALQVLSMRMLLCEED--DASVTEYMENFVLAEDTGADSRI 753
Query: 665 IKIFKDSISTKHYKKEIFEDCGDYLATALLYLRWCALAGMSISWSPDEGIWAM 507
+ FK S +YL+ AL LRWCA+ G + ++P++ WAM
Sbjct: 754 AEFFKCS--------------REYLSFALFNLRWCAMLGYPVCYAPNQSPWAM 792
>ref|XP_002889073.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297334914|gb|EFH65332.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 800
Score = 601 bits (1550), Expect = e-169
Identities = 350/791 (44%), Positives = 470/791 (59%), Gaps = 1/791 (0%)
Frame = -2
Query: 2861 LQSQIVSALQVGDRDRAFKFLTAFTSSSNQILKPDDFIHILNYCATSPDTVFFMETWRIM 2682
LQ QIV AL+ G+R A L F N L DF IL+YCA SPD VF MET+ +M
Sbjct: 64 LQVQIVDALRSGERPGASALLFQFIQG-NYSLSAHDFHDILHYCARSPDPVFVMETYSVM 122
Query: 2681 EEKEIEMDTRCYRSIIQALTKGGYLEEALNWLSFLGSSPHSAPDLSMYNIFLNGCAQMGS 2502
+KEI +D+R I+Q+L GG+L++A ++ +G +P L +YN FL CA+ S
Sbjct: 123 CKKEISLDSRSLLFIVQSLCNGGHLDKASEFIHAVGEDDSISPILPVYNYFLGACAKTRS 182
Query: 2501 MVHANSCLDLMENRLVGKSESTYLALLKLAVLQESLSAVQEIWKQYTKYYCPNIRSLQEF 2322
+ HA+ CL+LM+ R VGK+E TY ALLK +LSAV +IWK Y +Y +I L++F
Sbjct: 183 VYHASKCLELMDQRRVGKNEITYAALLK-----RNLSAVNDIWKHYVNHYSLDILPLRKF 237
Query: 2321 IRSFARLGDLVTALKALQHAVVLVFQGNASIERPVKGSFQSSRLDIPIPSTIDFAFKGSS 2142
I SF RLGDL +A + LQH V L +G ++ +G S+ LDIP+P+ KG +
Sbjct: 238 IWSFTRLGDLKSAYELLQHMVDLASRGELFVKSN-RGKLHSTTLDIPVPA------KGET 290
Query: 2141 MEENSLSLHPSPVLGAMTRAVEGTGCRSSALFTVTNKEQNHSRELAHGSSDILNNGIDAM 1962
E V +H+ E S L G + +
Sbjct: 291 GSEK-----------------------------VAFGVNDHNVEYNSSSKVALPKGHNKI 321
Query: 1961 HAMKILRLSFNDVIQACAQARKCKLAEQLFLEMRKLGLEPDSHTFNGLIRAVVNKRGVRE 1782
A ++LR SFNDVI AC Q++ +LAEQL L+M+ +GL P SHT++G IRAV G
Sbjct: 322 PATRVLRWSFNDVIHACGQSKNSELAEQLMLQMQNIGLLPSSHTYDGFIRAVAFPGGYEY 381
Query: 1781 GLKLLKAMEEMNLKPCNATLRMLSISCSKVXXXXXXXXXXDQAVESPCIQPFNCLLAACD 1602
G+ LLK M++ NLKP ++TL +S CSK DQ E PFN LLAA D
Sbjct: 382 GMTLLKVMQQQNLKPYDSTLATVSAYCSKAFQVDLAEHLLDQISECSYAYPFNNLLAAYD 441
Query: 1601 VVDQPERAVRXXXXXXXXXXXSNMETYELLFSLFGNVNAPYKKGDIFSRVDVAKRISAIE 1422
+DQPERAVR +M TYELLFSLFGNVNAPY++G++ S+VD KRI+AIE
Sbjct: 442 SLDQPERAVRVLARMKQLKLRPDMRTYELLFSLFGNVNAPYEEGNMLSQVDCCKRINAIE 501
Query: 1421 MDMLKNGLQHSHSSMVNLLKALGAEGMIKELIHYLSVAKTQFFLANTMEGTIIYNSVLYS 1242
MDM++NG QHS S N+L+ALGAEGM+ E+I +L A+ +N GT YN VL+S
Sbjct: 502 MDMVRNGFQHSPISRRNVLRALGAEGMVNEMIRHLQKAENLNVHSNMYLGTPTYNIVLHS 561
Query: 1241 LFEADEARMAFQVFKYMKLHDIPPDGLTYNIMIDCCGAISSSKIASMFLSMMLRDGFSPQ 1062
L EA+E M +FK MK P D TYNIMIDCC I S K A +SMM+RDGFSP+
Sbjct: 562 LLEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSIIHSYKSACALVSMMIRDGFSPK 621
Query: 1061 KYTYKSLIKIMLGKDNYRKAYWLLYQMSSEGIQPDVVVFNAILKKAFMEGRLRIAELIVE 882
T+ +L+KI+L N+ +A LL Q + E I DV+ +N IL+KAF +G + + E IVE
Sbjct: 622 AVTFTALMKILLNDGNFEEALNLLDQAALEEIHLDVLSYNTILRKAFEKGMIDVIEYIVE 681
Query: 881 RMHRMKVQPDPETCYLLYHAYVRSQKHGTALEALQVLSMRMISEE-QSVLQKNRKYFEDN 705
+MHR KV PDP TC+ ++ YV H TA+EAL VLS+RM++EE + LQ+ + E+N
Sbjct: 682 QMHREKVNPDPTTCHYVFTCYVEKGYHATAIEALNVLSLRMLNEEDKESLQEKKIELEEN 741
Query: 704 FVLAEDSEAELRIIKIFKDSISTKHYKKEIFEDCGDYLATALLYLRWCALAGMSISWSPD 525
FV++ED EAE +II++F++S ++LA ALL LRWCA+ G I WS D
Sbjct: 742 FVMSEDPEAETKIIELFRNS--------------EEHLAAALLNLRWCAMLGARIIWSED 787
Query: 524 EGIWAMSQKNQ 492
+ WA N+
Sbjct: 788 QSPWARGLSNK 798