BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003841
         (729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510662.1| ribosome biogenesis protein tsr1, putative [...   184   2e-44
ref|XP_002270499.1| PREDICTED: pre-rRNA-processing protein TSR1 ...   181   1e-43
ref|NP_564480.1| uncharacterized protein [Arabidopsis thaliana] ...   179   5e-43
ref|XP_002893932.1| hypothetical protein ARALYDRAFT_473739 [Arab...   179   7e-43
ref|XP_002888409.1| hypothetical protein ARALYDRAFT_894100 [Arab...   179   7e-43

>ref|XP_002510662.1| ribosome biogenesis protein tsr1, putative [Ricinus communis]
           gi|223551363|gb|EEF52849.1| ribosome biogenesis protein
           tsr1, putative [Ricinus communis]
          Length = 792

 Score =  184 bits (466), Expect = 2e-44
 Identities = 78/93 (83%), Positives = 89/93 (95%)
 Frame = +2

Query: 2   KKIILTGYPQRVSKLKATVRYMFHTPEDVRWFKPIEVWTKCGRRGRVKEPVGTHGAMKCI 181
           K+IILTGYPQRVSKLKA+VRYMFH PEDVRWFKP+EVWTKCGRRGR+KEPVGTHGAMKCI
Sbjct: 700 KRIILTGYPQRVSKLKASVRYMFHNPEDVRWFKPVEVWTKCGRRGRIKEPVGTHGAMKCI 759

Query: 182 FNGIVQQHDTVCMSLFKRVYPKWPEQRYPMINA 280
            NG++QQHDTVCMSL+KR YPKWPE R+P+++A
Sbjct: 760 LNGVLQQHDTVCMSLYKRAYPKWPEHRFPILDA 792


>ref|XP_002270499.1| PREDICTED: pre-rRNA-processing protein TSR1 homolog [Vitis
           vinifera] gi|297745545|emb|CBI40710.3| unnamed protein
           product [Vitis vinifera]
          Length = 801

 Score =  181 bits (460), Expect = 1e-43
 Identities = 78/93 (83%), Positives = 87/93 (93%)
 Frame = +2

Query: 2   KKIILTGYPQRVSKLKATVRYMFHTPEDVRWFKPIEVWTKCGRRGRVKEPVGTHGAMKCI 181
           KKIILTGYPQRVSKLKA VRYMFH+P+DVRWFKP+EVWTKCGRRGRVKEPVGTHG MKCI
Sbjct: 709 KKIILTGYPQRVSKLKAAVRYMFHSPDDVRWFKPVEVWTKCGRRGRVKEPVGTHGTMKCI 768

Query: 182 FNGIVQQHDTVCMSLFKRVYPKWPEQRYPMINA 280
           FNG++QQHDTVCMSL+KR YPKWPE  +P++ A
Sbjct: 769 FNGVLQQHDTVCMSLYKRTYPKWPEHGFPLLYA 801


>ref|NP_564480.1| uncharacterized protein [Arabidopsis thaliana]
           gi|13605690|gb|AAK32838.1|AF361826_1 At1g42440/F7F22_7
           [Arabidopsis thaliana] gi|22137072|gb|AAM91381.1|
           At1g42440/F7F22_7 [Arabidopsis thaliana]
           gi|23397226|gb|AAN31895.1| unknown protein [Arabidopsis
           thaliana] gi|332193797|gb|AEE31918.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 793

 Score =  179 bits (454), Expect = 5e-43
 Identities = 76/91 (83%), Positives = 86/91 (94%)
 Frame = +2

Query: 2   KKIILTGYPQRVSKLKATVRYMFHTPEDVRWFKPIEVWTKCGRRGRVKEPVGTHGAMKCI 181
           KKIILTGYPQRVSK+KA+VRYMFH PEDV+WFKP+EVW+KCGRRGRVKEPVGTHGAMKCI
Sbjct: 702 KKIILTGYPQRVSKMKASVRYMFHNPEDVKWFKPVEVWSKCGRRGRVKEPVGTHGAMKCI 761

Query: 182 FNGIVQQHDTVCMSLFKRVYPKWPEQRYPMI 274
           FNG+VQQHD VCM+L+KR YPKWPE+ YP +
Sbjct: 762 FNGVVQQHDVVCMNLYKRAYPKWPERLYPQL 792


>ref|XP_002893932.1| hypothetical protein ARALYDRAFT_473739 [Arabidopsis lyrata subsp.
           lyrata] gi|297339774|gb|EFH70191.1| hypothetical protein
           ARALYDRAFT_473739 [Arabidopsis lyrata subsp. lyrata]
          Length = 799

 Score =  179 bits (453), Expect = 7e-43
 Identities = 76/91 (83%), Positives = 86/91 (94%)
 Frame = +2

Query: 2   KKIILTGYPQRVSKLKATVRYMFHTPEDVRWFKPIEVWTKCGRRGRVKEPVGTHGAMKCI 181
           KKIILTGYPQRVSK+KA+VRYMFH PEDV+WFKP+EVW+KCGRRGRVKEPVGTHGAMKCI
Sbjct: 708 KKIILTGYPQRVSKMKASVRYMFHNPEDVKWFKPVEVWSKCGRRGRVKEPVGTHGAMKCI 767

Query: 182 FNGIVQQHDTVCMSLFKRVYPKWPEQRYPMI 274
           FNG+VQQHD VCM+L+KR YPKWPE+ YP +
Sbjct: 768 FNGVVQQHDIVCMNLYKRAYPKWPERLYPQL 798


>ref|XP_002888409.1| hypothetical protein ARALYDRAFT_894100 [Arabidopsis lyrata subsp.
           lyrata] gi|297334250|gb|EFH64668.1| hypothetical protein
           ARALYDRAFT_894100 [Arabidopsis lyrata subsp. lyrata]
          Length = 792

 Score =  179 bits (453), Expect = 7e-43
 Identities = 76/91 (83%), Positives = 86/91 (94%)
 Frame = +2

Query: 2   KKIILTGYPQRVSKLKATVRYMFHTPEDVRWFKPIEVWTKCGRRGRVKEPVGTHGAMKCI 181
           KKIILTGYPQRVSK+KA+VRYMFH PEDV+WFKP+EVW+KCGRRGRVKEPVGTHGAMKCI
Sbjct: 701 KKIILTGYPQRVSKMKASVRYMFHNPEDVKWFKPVEVWSKCGRRGRVKEPVGTHGAMKCI 760

Query: 182 FNGIVQQHDTVCMSLFKRVYPKWPEQRYPMI 274
           FNG+VQQHD VCM+L+KR YPKWPE+ YP +
Sbjct: 761 FNGVVQQHDIVCMNLYKRAYPKWPERLYPQL 791