BLASTX nr result

ID: Coptis24_contig00003840 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003840
         (752 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274136.2| PREDICTED: uncharacterized protein At1g76660...   182   7e-44
ref|XP_002300608.1| predicted protein [Populus trichocarpa] gi|2...   172   9e-41
ref|XP_003550451.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   163   3e-38
ref|XP_004150969.1| PREDICTED: uncharacterized protein At1g76660...   161   2e-37
gb|AFK47597.1| unknown [Medicago truncatula]                          160   3e-37

>ref|XP_002274136.2| PREDICTED: uncharacterized protein At1g76660-like [Vitis vinifera]
          Length = 484

 Score =  182 bits (462), Expect = 7e-44
 Identities = 104/199 (52%), Positives = 128/199 (64%), Gaps = 3/199 (1%)
 Frame = -2

Query: 751 SREADVQSSSGNGHQNRHTKSSKPDVEEIEAYRASFGFSADEIITTPHYVEMSDDILDVS 572
           SRE+DV SS GNGHQNRH K+ K DVEEIEAYRASFGFSADEIITT  YVE+S D+L+ S
Sbjct: 295 SRESDVYSSGGNGHQNRHNKNCKQDVEEIEAYRASFGFSADEIITTTQYVEIS-DVLEDS 353

Query: 571 FTMAPLASNNKVDTEEKLVPLTWNRGGNAQTTYTNPQ---DDRGLGSASDQAANVVGCKV 401
           FTM P  S NK D EE +VP   + G   QT   N +    + GL         +  CK 
Sbjct: 354 FTMTPFTS-NKPDMEENVVPAVVHEGPKDQTNLLNEESLKSESGLVDEGGCCEGLPSCKT 412

Query: 400 QELGSVRKGHDSPKLSTDVTNRNQSDNEVMTDEDDIFSKMGSSRINKRYQLGLSSSDAEI 221
            E       H S + S + +  +     ++TDE++IF K G+S+I ++Y LGLSSSDAEI
Sbjct: 413 FE------DHKSERQSGNESGSSTPGKHILTDEEEIFPK-GASKIGRKYHLGLSSSDAEI 465

Query: 220 DYRRGRSLRERKGDISWRN 164
           DYRRGRSLRE KGD +W +
Sbjct: 466 DYRRGRSLREGKGDFAWHD 484


>ref|XP_002300608.1| predicted protein [Populus trichocarpa] gi|222842334|gb|EEE79881.1|
           predicted protein [Populus trichocarpa]
          Length = 470

 Score =  172 bits (435), Expect = 9e-41
 Identities = 101/199 (50%), Positives = 126/199 (63%), Gaps = 3/199 (1%)
 Frame = -2

Query: 751 SREADVQSSSGNGHQNRHTKSSKPDVEEIEAYRASFGFSADEIITTPHYVEMSDDILDVS 572
           S+++DV  +SGNGHQNRH KS K D EE+EAYRASFGFSADEIITTP YVE+S D+++ +
Sbjct: 278 SKDSDVYPASGNGHQNRHNKSPKQDAEELEAYRASFGFSADEIITTPQYVEIS-DVMEDT 336

Query: 571 FTMAPLASNNKVDTEEKLVPLTWNRGGNAQTTYTNPQDDRGLGSASDQAANVVGCKVQEL 392
           F+M P  S  K   EE +     N G   Q    N      L   SD A  VV C+V   
Sbjct: 337 FSMTPFTS-AKPTMEESMEASLLNEG---QKANANLPKQNSLKLKSDLADRVVCCEVPVT 392

Query: 391 GSVRKGHDSPK---LSTDVTNRNQSDNEVMTDEDDIFSKMGSSRINKRYQLGLSSSDAEI 221
               + +  PK      +V+  +   N V+TD DDIFSKM SS+ +++Y LGLSSSDAEI
Sbjct: 393 SDRYEVNSDPKSRWQPGNVSGSSTPSNHVVTD-DDIFSKMASSKTSRKYHLGLSSSDAEI 451

Query: 220 DYRRGRSLRERKGDISWRN 164
           DYRRGRSLRE KGD +W +
Sbjct: 452 DYRRGRSLREGKGDFAWHD 470


>ref|XP_003550451.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           At1g76660-like [Glycine max]
          Length = 475

 Score =  163 bits (413), Expect = 3e-38
 Identities = 101/198 (51%), Positives = 128/198 (64%), Gaps = 9/198 (4%)
 Frame = -2

Query: 751 SREADVQSSSGNGHQNRHTKSSKPDVEEIEAYRASFGFSADEIITTPHYVEMSDDILDVS 572
           S+++DVQS+ GNGHQ+RH +S K DVEEIEAYRASFGFSADEIITT  YVE+S D+++ S
Sbjct: 287 SKDSDVQSNGGNGHQSRHARSPKQDVEEIEAYRASFGFSADEIITTSQYVEIS-DVMEES 345

Query: 571 FTMAPLASNNKVDTEEKLVPLTWNRGGNAQTTYTNPQDDRGL-------GSASDQAANVV 413
           FTM P AS NK   EE + P ++ +G  AQ T    Q  R L       G   D  A + 
Sbjct: 346 FTMLPFAS-NKSTMEESIEP-SFMKGFKAQDTQVALQSQRSLRSDPGPVGKEKDNQAPI- 402

Query: 412 GCKVQELGSVRKGH--DSPKLSTDVTNRNQSDNEVMTDEDDIFSKMGSSRINKRYQLGLS 239
            C   E   + +GH  +S  LST        +N  + D++DIFSKM SSRI ++YQ+GLS
Sbjct: 403 -CPGYE-DHISQGHCSNSSGLST-------PENRTLEDDEDIFSKMESSRICRKYQMGLS 453

Query: 238 SSDAEIDYRRGRSLRERK 185
            SDAE+DYRRGRS RE +
Sbjct: 454 CSDAEVDYRRGRSFREER 471


>ref|XP_004150969.1| PREDICTED: uncharacterized protein At1g76660-like [Cucumis sativus]
          Length = 469

 Score =  161 bits (407), Expect = 2e-37
 Identities = 95/199 (47%), Positives = 130/199 (65%), Gaps = 3/199 (1%)
 Frame = -2

Query: 751 SREADVQSSSGNGHQNRHTKSSKPDVEEIEAYRASFGFSADEIITTPHYVEMSDDILDVS 572
           S+++DV SS GNG+QNRH+KS K DVEEIEAYRASFGFSADEIITT  YVE+S D+++ S
Sbjct: 286 SKDSDVYSSCGNGYQNRHSKSPKQDVEEIEAYRASFGFSADEIITTTQYVEIS-DVMEDS 344

Query: 571 FTMAPLASNNKVDTEEKLVPLTWNRGGNAQTTYTNPQDDRGLGSASDQAANVVGCKVQEL 392
           FTM P  S +    E    PL    G   ++++T  Q  R + SA ++          E+
Sbjct: 345 FTMRPFTSTSLSAEESTEPPLL---GEKLKSSHTTLQSQRSIKSAPEETCT-------EM 394

Query: 391 GSVRKGHDSPKLST---DVTNRNQSDNEVMTDEDDIFSKMGSSRINKRYQLGLSSSDAEI 221
            ++  G+   KL     D++  + S N+V   E D+FS++GSS+ +++Y LGLS SDAE+
Sbjct: 395 PALCNGYKDNKLQRQPGDISGSSTS-NQV---EKDVFSRIGSSKNSRKYDLGLSCSDAEV 450

Query: 220 DYRRGRSLRERKGDISWRN 164
           DYRRGRSLRE KG+ SW +
Sbjct: 451 DYRRGRSLREAKGNGSWHD 469


>gb|AFK47597.1| unknown [Medicago truncatula]
          Length = 221

 Score =  160 bits (405), Expect = 3e-37
 Identities = 97/195 (49%), Positives = 125/195 (64%), Gaps = 5/195 (2%)
 Frame = -2

Query: 751 SREADVQSSSGNGHQNRHTKSSKPDVEEIEAYRASFGFSADEIITTPHYVEMSDDILDVS 572
           S+++D QS+ GNGHQ+R ++S K DVEEIEAYRASFGFSADEIITT  YVE+S D++D S
Sbjct: 35  SKDSDAQSTGGNGHQSRPSRSPKQDVEEIEAYRASFGFSADEIITTSQYVEIS-DVMDDS 93

Query: 571 FTMAPLASNNKVDTEEKLVPLTWNRGGNAQTTYTNPQDDRGL----GSASDQAANVVG-C 407
           FTM PL S   +  EE + P +  +   A  T    Q+ + L         QA N V  C
Sbjct: 94  FTMMPLTSGKSM-MEENIEP-SLMKEFKAHETQVGLQNLKCLRLDASPVGKQAKNQVPIC 151

Query: 406 KVQELGSVRKGHDSPKLSTDVTNRNQSDNEVMTDEDDIFSKMGSSRINKRYQLGLSSSDA 227
              E       H SP   ++ +  +  DN  + D++DIFSK+GSSRI ++YQ+GLS SDA
Sbjct: 152 HGYE------DHKSPGYCSNSSGLSTPDNHTLMDDEDIFSKLGSSRICRKYQMGLSCSDA 205

Query: 226 EIDYRRGRSLRERKG 182
           E+DYRRGR LRERKG
Sbjct: 206 EVDYRRGRGLRERKG 220


Top