BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003834
         (1252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282844.1| PREDICTED: F-box protein PP2-A12 [Vitis vini...   434   e-119
emb|CBI34744.3| unnamed protein product [Vitis vinifera]              428   e-117
ref|XP_002269833.1| PREDICTED: F-box protein PP2-A13 [Vitis vini...   412   e-113
ref|XP_002320090.1| f-box family protein [Populus trichocarpa] g...   405   e-110
ref|XP_002322448.1| f-box family protein [Populus trichocarpa] g...   399   e-109

>ref|XP_002282844.1| PREDICTED: F-box protein PP2-A12 [Vitis vinifera]
          Length = 283

 Score =  434 bits (1115), Expect = e-119
 Identities = 196/262 (74%), Positives = 224/262 (85%)
 Frame = -1

Query: 1093 GDIPEGCISSILTNLDPPDICKLAKVNRTFRDASTSDFIWESKLPSTYQYLIDRLGDGLP 914
            GD+PE C++ +L+ LDPP+ICKLAK+NR FR AS +D +WE KLPS Y  +I+++    P
Sbjct: 22   GDLPEDCVALVLSYLDPPEICKLAKLNRAFRGASRADLVWEPKLPSNYCLVIEKVFKDFP 81

Query: 913  SNLSKKDIYTRLCRPNPFDGGTKAIWLEKSTGGVCLSISAKGLTITGIDDRRYWNHIPTE 734
             NL KK+IY RLC+PNPFDGGTK  WL+K TGGVCLSIS+KGL ITGIDDRRYW +IPTE
Sbjct: 82   ENLCKKEIYARLCQPNPFDGGTKKAWLDKRTGGVCLSISSKGLAITGIDDRRYWTYIPTE 141

Query: 733  ESRFHTVAYLQQIWWLEVDGEIEFHFPAGTYSMFFRLQLGRASKRLGRRVCNPEHVHGWD 554
            ESRF+TVAY+QQIWWLEVDGE++F FPAGTYS+FFRLQLGRASKRLGRR+CNPEHVHGWD
Sbjct: 142  ESRFNTVAYVQQIWWLEVDGEVDFPFPAGTYSIFFRLQLGRASKRLGRRICNPEHVHGWD 201

Query: 553  VKPVRFQLSTSEGQQAISQCFLDEPGNWINYHVGDFVVENPTVPTKIKFSMIQIDCTHTK 374
            +KPVRFQL TS+GQ A SQCFLDEPG WI YH  DFVV+N   PTKIKFSM QIDCTHTK
Sbjct: 202  IKPVRFQLWTSDGQHATSQCFLDEPGRWIQYHAADFVVDNSNAPTKIKFSMTQIDCTHTK 261

Query: 373  GGLCLDSVLICPSEFRERLKRF 308
            GGLC+DSVLI P EFRERLK F
Sbjct: 262  GGLCVDSVLIYPREFRERLKHF 283


>emb|CBI34744.3| unnamed protein product [Vitis vinifera]
          Length = 309

 Score =  428 bits (1100), Expect = e-117
 Identities = 193/258 (74%), Positives = 221/258 (85%)
 Frame = -1

Query: 1093 GDIPEGCISSILTNLDPPDICKLAKVNRTFRDASTSDFIWESKLPSTYQYLIDRLGDGLP 914
            GD+PE C++ +L+ LDPP+ICKLAK+NR FR AS +D +WE KLPS Y  +I+++    P
Sbjct: 22   GDLPEDCVALVLSYLDPPEICKLAKLNRAFRGASRADLVWEPKLPSNYCLVIEKVFKDFP 81

Query: 913  SNLSKKDIYTRLCRPNPFDGGTKAIWLEKSTGGVCLSISAKGLTITGIDDRRYWNHIPTE 734
             NL KK+IY RLC+PNPFDGGTK  WL+K TGGVCLSIS+KGL ITGIDDRRYW +IPTE
Sbjct: 82   ENLCKKEIYARLCQPNPFDGGTKKAWLDKRTGGVCLSISSKGLAITGIDDRRYWTYIPTE 141

Query: 733  ESRFHTVAYLQQIWWLEVDGEIEFHFPAGTYSMFFRLQLGRASKRLGRRVCNPEHVHGWD 554
            ESRF+TVAY+QQIWWLEVDGE++F FPAGTYS+FFRLQLGRASKRLGRR+CNPEHVHGWD
Sbjct: 142  ESRFNTVAYVQQIWWLEVDGEVDFPFPAGTYSIFFRLQLGRASKRLGRRICNPEHVHGWD 201

Query: 553  VKPVRFQLSTSEGQQAISQCFLDEPGNWINYHVGDFVVENPTVPTKIKFSMIQIDCTHTK 374
            +KPVRFQL TS+GQ A SQCFLDEPG WI YH  DFVV+N   PTKIKFSM QIDCTHTK
Sbjct: 202  IKPVRFQLWTSDGQHATSQCFLDEPGRWIQYHAADFVVDNSNAPTKIKFSMTQIDCTHTK 261

Query: 373  GGLCLDSVLICPSEFRER 320
            GGLC+DSVLI P EFRER
Sbjct: 262  GGLCVDSVLIYPREFRER 279


>ref|XP_002269833.1| PREDICTED: F-box protein PP2-A13 [Vitis vinifera]
            gi|296089069|emb|CBI38772.3| unnamed protein product
            [Vitis vinifera]
          Length = 289

 Score =  412 bits (1059), Expect = e-113
 Identities = 186/254 (73%), Positives = 212/254 (83%), Gaps = 2/254 (0%)
 Frame = -1

Query: 1093 GDIPEGCISSILTNLDPPDICKLAKVNRTFRDASTSDFIWESKLPSTYQYLIDRLG--DG 920
            GDIPE C++ +L NLDPP+ICKLA++NR FR AS +DFIWE+KLP  Y+ LI  L   D 
Sbjct: 25   GDIPESCLALVLMNLDPPEICKLARLNRAFRGASAADFIWEAKLPPNYRSLIQELKIFDE 84

Query: 919  LPSNLSKKDIYTRLCRPNPFDGGTKAIWLEKSTGGVCLSISAKGLTITGIDDRRYWNHIP 740
               NL KK IY RLCRPNPFDGGTK +WL+K TGGVC SIS+K LTITGIDDRRYWNHIP
Sbjct: 85   FSMNLRKKGIYARLCRPNPFDGGTKEVWLDKRTGGVCFSISSKALTITGIDDRRYWNHIP 144

Query: 739  TEESRFHTVAYLQQIWWLEVDGEIEFHFPAGTYSMFFRLQLGRASKRLGRRVCNPEHVHG 560
            TEESRF TVAYLQQ WW EVDGE EF FP GTYS+FFRL LGRASKRLGRRVCNPEH+HG
Sbjct: 145  TEESRFQTVAYLQQTWWFEVDGEFEFRFPPGTYSLFFRLHLGRASKRLGRRVCNPEHIHG 204

Query: 559  WDVKPVRFQLSTSEGQQAISQCFLDEPGNWINYHVGDFVVENPTVPTKIKFSMIQIDCTH 380
            WD+KPV+FQL+TSEGQ A+S+C+L+ PGNWI++HVGDFVVE      K+KFS  QIDCTH
Sbjct: 205  WDIKPVKFQLTTSEGQHAVSKCYLENPGNWIHHHVGDFVVEQGDTAMKVKFSATQIDCTH 264

Query: 379  TKGGLCLDSVLICP 338
            TKGG+C+DSVLICP
Sbjct: 265  TKGGVCVDSVLICP 278


>ref|XP_002320090.1| f-box family protein [Populus trichocarpa]
            gi|222860863|gb|EEE98405.1| f-box family protein [Populus
            trichocarpa]
          Length = 294

 Score =  405 bits (1041), Expect = e-110
 Identities = 178/254 (70%), Positives = 213/254 (83%), Gaps = 1/254 (0%)
 Frame = -1

Query: 1093 GDIPEGCISSILTNLDPPDICKLAKVNRTFRDASTSDFIWESKLPSTYQYLIDR-LGDGL 917
            GDIPE C++ +L +LDPPDICKLA++NR F  AS++DFIWESKLPS Y+++ ++ L +  
Sbjct: 25   GDIPESCLALVLMHLDPPDICKLARLNRAFHGASSADFIWESKLPSNYKFICEKVLDEKT 84

Query: 916  PSNLSKKDIYTRLCRPNPFDGGTKAIWLEKSTGGVCLSISAKGLTITGIDDRRYWNHIPT 737
               L KKD+Y R+CRPNPFDGGTK +WL+K TGG C SIS+KGL ITGIDDRRYWNHI T
Sbjct: 85   VVGLEKKDVYARMCRPNPFDGGTKEVWLDKKTGGACFSISSKGLAITGIDDRRYWNHIST 144

Query: 736  EESRFHTVAYLQQIWWLEVDGEIEFHFPAGTYSMFFRLQLGRASKRLGRRVCNPEHVHGW 557
            EESRFHTVAYLQQIWW E+DGE EF FP G YS+FFRLQLGR+SKR+GRRVCN EH+HGW
Sbjct: 145  EESRFHTVAYLQQIWWFEIDGEFEFEFPKGMYSLFFRLQLGRSSKRMGRRVCNSEHIHGW 204

Query: 556  DVKPVRFQLSTSEGQQAISQCFLDEPGNWINYHVGDFVVENPTVPTKIKFSMIQIDCTHT 377
            D+KPVRFQL+TS+GQ+A S+CFLD PGNW+ YH GDFVV+ P+   KIKFSM QIDCTHT
Sbjct: 205  DIKPVRFQLTTSDGQRAASKCFLDTPGNWVYYHAGDFVVDRPSELMKIKFSMTQIDCTHT 264

Query: 376  KGGLCLDSVLICPS 335
            KGGLC+D+  + PS
Sbjct: 265  KGGLCVDAAFVYPS 278


>ref|XP_002322448.1| f-box family protein [Populus trichocarpa]
            gi|222869444|gb|EEF06575.1| f-box family protein [Populus
            trichocarpa]
          Length = 288

 Score =  399 bits (1026), Expect = e-109
 Identities = 178/262 (67%), Positives = 221/262 (84%), Gaps = 1/262 (0%)
 Frame = -1

Query: 1090 DIPEGCISSILTNLDPPDICKLAKVNRTFRDASTSDFIWESKLPSTYQYLIDRLGDGLPS 911
            D+PE C+SSI   LDPP+ICKLAK+N+TF  AS +DF+WE+KLPS Y++L++++    P 
Sbjct: 27   DVPECCVSSIFMYLDPPEICKLAKLNKTFHGASLADFVWETKLPSNYKFLVEKVLGQSPE 86

Query: 910  NLSKKDIYTRLCRPNPFDGGTKAIWLEKSTGGVCLSISAKGLTITGIDDRRYWNHIPTEE 731
            +LSKK+IY RLCRPN FD G K +WL+KS+G +C+++S K L ITGIDDRRYWNHI +EE
Sbjct: 87   SLSKKEIYARLCRPNCFDKGAKQVWLDKSSGKICVAVSYKALRITGIDDRRYWNHISSEE 146

Query: 730  SRFHTVAYLQQIWWLEVDGEIEFHFPAGTYSMFFRLQLGRASKRLGRRVCNPEHVHGWDV 551
            SRF+T+AYLQQIWW EV GE+EF FPAGTYS+FFRLQLG+ SK+LGRR CN + VHGWD+
Sbjct: 147  SRFNTIAYLQQIWWFEVGGELEFEFPAGTYSLFFRLQLGKTSKKLGRRTCNVDRVHGWDI 206

Query: 550  KPVRFQLSTSEGQQAISQCFLDEPGNWINYHVGDFVV-ENPTVPTKIKFSMIQIDCTHTK 374
            KPVRFQLSTS GQQA S+C+L + GNW +YH GDFVV  + T P K++FSM+QIDCTHTK
Sbjct: 207  KPVRFQLSTSNGQQASSECYLHQQGNWGHYHAGDFVVYSSNTAPLKLRFSMMQIDCTHTK 266

Query: 373  GGLCLDSVLICPSEFRERLKRF 308
            GG+CLDSVLICPSEFRE+LK+F
Sbjct: 267  GGVCLDSVLICPSEFREKLKQF 288