BLASTX nr result
ID: Coptis24_contig00003821
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00003821 (824 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI32017.3| unnamed protein product [Vitis vinifera] 60 6e-07 ref|XP_002276636.1| PREDICTED: mitochondrial outer membrane prot... 60 6e-07 gb|AAY82249.1| mitochrondrial voltage-dependent anion-selective ... 57 5e-06 >emb|CBI32017.3| unnamed protein product [Vitis vinifera] Length = 240 Score = 60.1 bits (144), Expect = 6e-07 Identities = 40/99 (40%), Positives = 57/99 (57%), Gaps = 6/99 (6%) Frame = -3 Query: 693 DLFCKVSSGGLKFTLGHHTSIGKILQGIRHSETRIGDSYLADVKTQLK-----CEISDNI 529 DL + KFT+ +TS G I S T+ G+ ++ADV TQLK ++ + Sbjct: 17 DLLYRDYQSDHKFTVTTYTSSGV---AITSSGTKKGELFIADVNTQLKNKNITTDVKVDT 73 Query: 528 HSRVFATM-ISEPIPGMKTIFNFIIPDCNFGKVGNLDYM 415 +S +F T+ + EP PG+KTIF+FIIPD GKV L Y+ Sbjct: 74 NSNLFTTITVDEPAPGLKTIFSFIIPDQRSGKV-ELQYL 111 >ref|XP_002276636.1| PREDICTED: mitochondrial outer membrane protein porin of 36 kDa isoform 1 [Vitis vinifera] Length = 276 Score = 60.1 bits (144), Expect = 6e-07 Identities = 40/99 (40%), Positives = 57/99 (57%), Gaps = 6/99 (6%) Frame = -3 Query: 693 DLFCKVSSGGLKFTLGHHTSIGKILQGIRHSETRIGDSYLADVKTQLK-----CEISDNI 529 DL + KFT+ +TS G I S T+ G+ ++ADV TQLK ++ + Sbjct: 17 DLLYRDYQSDHKFTVTTYTSSGV---AITSSGTKKGELFIADVNTQLKNKNITTDVKVDT 73 Query: 528 HSRVFATM-ISEPIPGMKTIFNFIIPDCNFGKVGNLDYM 415 +S +F T+ + EP PG+KTIF+FIIPD GKV L Y+ Sbjct: 74 NSNLFTTITVDEPAPGLKTIFSFIIPDQRSGKV-ELQYL 111 >gb|AAY82249.1| mitochrondrial voltage-dependent anion-selective channel [Phaseolus coccineus] Length = 276 Score = 57.0 bits (136), Expect = 5e-06 Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 6/99 (6%) Frame = -3 Query: 693 DLFCKVSSGGLKFTLGHHTSIGKILQGIRHSETRIGDSYLADVKTQLK-----CEISDNI 529 DL K KFT+ ++ G I S TR G+ +LADV TQLK +I + Sbjct: 17 DLLFKDYHSDQKFTVTTYSPTGV---AITSSGTRKGELFLADVNTQLKNKNITTDIKVDT 73 Query: 528 HSRVFATM-ISEPIPGMKTIFNFIIPDCNFGKVGNLDYM 415 S +F T+ ++EP PG+K IFNF +PD GKV L Y+ Sbjct: 74 DSNLFTTITVNEPAPGLKAIFNFKVPDQRSGKV-ELQYL 111