BLASTX nr result

ID: Coptis24_contig00003821 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003821
         (824 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32017.3| unnamed protein product [Vitis vinifera]               60   6e-07
ref|XP_002276636.1| PREDICTED: mitochondrial outer membrane prot...    60   6e-07
gb|AAY82249.1| mitochrondrial voltage-dependent anion-selective ...    57   5e-06

>emb|CBI32017.3| unnamed protein product [Vitis vinifera]
          Length = 240

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 40/99 (40%), Positives = 57/99 (57%), Gaps = 6/99 (6%)
 Frame = -3

Query: 693 DLFCKVSSGGLKFTLGHHTSIGKILQGIRHSETRIGDSYLADVKTQLK-----CEISDNI 529
           DL  +      KFT+  +TS G     I  S T+ G+ ++ADV TQLK      ++  + 
Sbjct: 17  DLLYRDYQSDHKFTVTTYTSSGV---AITSSGTKKGELFIADVNTQLKNKNITTDVKVDT 73

Query: 528 HSRVFATM-ISEPIPGMKTIFNFIIPDCNFGKVGNLDYM 415
           +S +F T+ + EP PG+KTIF+FIIPD   GKV  L Y+
Sbjct: 74  NSNLFTTITVDEPAPGLKTIFSFIIPDQRSGKV-ELQYL 111


>ref|XP_002276636.1| PREDICTED: mitochondrial outer membrane protein porin of 36 kDa
           isoform 1 [Vitis vinifera]
          Length = 276

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 40/99 (40%), Positives = 57/99 (57%), Gaps = 6/99 (6%)
 Frame = -3

Query: 693 DLFCKVSSGGLKFTLGHHTSIGKILQGIRHSETRIGDSYLADVKTQLK-----CEISDNI 529
           DL  +      KFT+  +TS G     I  S T+ G+ ++ADV TQLK      ++  + 
Sbjct: 17  DLLYRDYQSDHKFTVTTYTSSGV---AITSSGTKKGELFIADVNTQLKNKNITTDVKVDT 73

Query: 528 HSRVFATM-ISEPIPGMKTIFNFIIPDCNFGKVGNLDYM 415
           +S +F T+ + EP PG+KTIF+FIIPD   GKV  L Y+
Sbjct: 74  NSNLFTTITVDEPAPGLKTIFSFIIPDQRSGKV-ELQYL 111


>gb|AAY82249.1| mitochrondrial voltage-dependent anion-selective channel [Phaseolus
           coccineus]
          Length = 276

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
 Frame = -3

Query: 693 DLFCKVSSGGLKFTLGHHTSIGKILQGIRHSETRIGDSYLADVKTQLK-----CEISDNI 529
           DL  K      KFT+  ++  G     I  S TR G+ +LADV TQLK      +I  + 
Sbjct: 17  DLLFKDYHSDQKFTVTTYSPTGV---AITSSGTRKGELFLADVNTQLKNKNITTDIKVDT 73

Query: 528 HSRVFATM-ISEPIPGMKTIFNFIIPDCNFGKVGNLDYM 415
            S +F T+ ++EP PG+K IFNF +PD   GKV  L Y+
Sbjct: 74  DSNLFTTITVNEPAPGLKAIFNFKVPDQRSGKV-ELQYL 111


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