BLASTX nr result

ID: Coptis24_contig00003810 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003810
         (1040 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309702.1| cc-nbs-lrr resistance protein [Populus trich...    83   1e-13
ref|XP_003568448.1| PREDICTED: putative disease resistance RPP13...    82   2e-13
dbj|BAC83223.1| putative resistance complex protein I2C-2 [Oryza...    76   2e-11
gb|EEE67287.1| hypothetical protein OsJ_24482 [Oryza sativa Japo...    76   2e-11
ref|NP_001059807.1| Os07g0521100 [Oryza sativa Japonica Group] g...    76   2e-11

>ref|XP_002309702.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222855678|gb|EEE93225.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1052

 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 89/319 (27%), Positives = 133/319 (41%), Gaps = 50/319 (15%)
 Frame = -1

Query: 1031 VLENLEPHKESLERLEIRNYVGFTLPPWMLSVEESVLSNIVDLKLYWCPNLKVLPALGKL 852
            +L++L P+  +L+ L +  Y G   P W+L      LSN++ +++  C  LK +P L  +
Sbjct: 729  MLQSLRPNS-NLQELRVEGYGGMRFPSWVLE-----LSNLLRIRVERCRRLKHIPPLDGI 782

Query: 851  QFLEQLWLEDLISVKHLGLLRVGNGDXXXXXXXXXXXXXXXXXXXXXXXXLEWEEEEHDV 672
              LE+L +E L  ++++    VG G                           W  +E + 
Sbjct: 783  PSLEELSIEGLDDLEYIDSEGVG-GKGVSTFFPSLKRLEMWDCGGLKGWWKRWSRDEMND 841

Query: 671  P---TTRSDNTTIIIMPRLHKLKISNCPKLKVVPVYLFPPRLEKLVLRGDVGVVSKSLM- 504
                +T  +   ++  PRL  LKI  CP L  +P  LFP   E L L G   +  +  M 
Sbjct: 842  DRDESTIEEGLRMLCFPRLSSLKIRYCPNLTSMP--LFPTLDEDLYLWGTSSMPLQQTMK 899

Query: 503  ---------FLTHNNNLKSLYINSLPH-SSLPQ-GLNQLKSLQELRFYSCKYLDFKP--- 366
                     F+   + LK LYI S+    S+P+  L  L SLQ+L  Y C  L   P   
Sbjct: 900  MTSPVSSSSFIRPLSKLKRLYIGSIDDMESVPEVWLQNLSSLQQLSIYECPRLKSLPLPD 959

Query: 365  --------------EELKLLTV------------LRKLEIKRCP--ISTR----GCSREE 282
                           ELK L+             L++L I+ C   +S R    G  REE
Sbjct: 960  QGMHSLQKLHIADCRELKSLSESESQGMIPYLPSLQQLIIEDCSEEVSGRARGWGKEREE 1019

Query: 281  DWSILTHILDIRIDNKYIK 225
            +W  + HI DI ID  YI+
Sbjct: 1020 EWPNIKHIPDIGIDGDYIQ 1038


>ref|XP_003568448.1| PREDICTED: putative disease resistance RPP13-like protein 1-like
            [Brachypodium distachyon]
          Length = 1112

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 72/247 (29%), Positives = 112/247 (45%), Gaps = 5/247 (2%)
 Frame = -1

Query: 1031 VLENLEPHKESLERLEIRNYVGFTLPPW--MLSVEESVLSNIVDLKLYWCPNLKVLPALG 858
            VLE LEPH   +E + IR Y G T P W  M   +++ L  +  L L  C   +VLP LG
Sbjct: 745  VLEGLEPHPH-VEEIRIRRYHGNTSPCWLGMSFKKDNTLRLLKSLYLTNCRKWEVLPPLG 803

Query: 857  KLQFLEQLWLEDLISVKHLGLLRVGNGDXXXXXXXXXXXXXXXXXXXXXXXXLEWEEEEH 678
            +L  L+ L L+++ SVK +G    G                            EW EEE 
Sbjct: 804  QLPCLKVLHLKEMCSVKQIGSEFHGTNSIAFPCLTDLLFDDMLQLV-------EWTEEEK 856

Query: 677  DVPTTRSDNTTIIIMPRLHKLKISNCPKLKVVPVYLFPPRLEKLVLRGDVGVVSKSLMFL 498
            ++           + P+LHKL + NCPKL  VP     P + K+ ++ + G VS   +  
Sbjct: 857  NID----------VFPKLHKLSLLNCPKLVKVPP--LSPSVRKVTVK-NTGFVSHMKLSF 903

Query: 497  THNNNLKSLYINSLPHSSLPQGL---NQLKSLQELRFYSCKYLDFKPEELKLLTVLRKLE 327
            + ++   +  + +   S L  G     Q++S+  L    C+ + FK  + + LT L+KL+
Sbjct: 904  SSSSQAFNAALETCSSSILTDGFLRKQQVESIVVLALKRCEDVKFK--DFQALTSLKKLQ 961

Query: 326  IKRCPIS 306
            I    I+
Sbjct: 962  ISHSDIT 968


>dbj|BAC83223.1| putative resistance complex protein I2C-2 [Oryza sativa Japonica
            Group]
          Length = 1237

 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 65/239 (27%), Positives = 107/239 (44%)
 Frame = -1

Query: 1031 VLENLEPHKESLERLEIRNYVGFTLPPWMLSVEESVLSNIVDLKLYWCPNLKVLPALGKL 852
            +L+ L PH + L+RL+I NY+G   P W+  + + V  NI++     C  L VLP LG+L
Sbjct: 852  ILDGLHPHFQ-LKRLKILNYMGIDFPYWVQRLTDLVAVNIIN-----CRWLSVLPPLGEL 905

Query: 851  QFLEQLWLEDLISVKHLGLLRVGNGDXXXXXXXXXXXXXXXXXXXXXXXXLEWEEEEHDV 672
              L++L L  L S+ H+     G  D                         +W E E+  
Sbjct: 906  PRLKKLSLFGLSSITHINDQVYGTND-------VIFPYLEELHFSELFSWEQWSEAEYK- 957

Query: 671  PTTRSDNTTIIIMPRLHKLKISNCPKLKVVPVYLFPPRLEKLVLRGDVGVVSKSLMFLTH 492
                      +++P L KL I+ C KL ++P+      +++L L      +S    +L  
Sbjct: 958  ----------LLIPHLRKLGINACSKLSLLPIETLSSSVKELHLSSCTSYISMLPAYLKR 1007

Query: 491  NNNLKSLYINSLPHSSLPQGLNQLKSLQELRFYSCKYLDFKPEELKLLTVLRKLEIKRC 315
              +L  L I     ++L    + L  L+ L+  SC  + F+   ++  T L+KLE+ RC
Sbjct: 1008 LTSLTKLSIQDC-SATLLIPCHSLTLLEHLQLESCFDVHFE-GGMQYFTKLKKLEVHRC 1064


>gb|EEE67287.1| hypothetical protein OsJ_24482 [Oryza sativa Japonica Group]
          Length = 1256

 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 65/239 (27%), Positives = 107/239 (44%)
 Frame = -1

Query: 1031 VLENLEPHKESLERLEIRNYVGFTLPPWMLSVEESVLSNIVDLKLYWCPNLKVLPALGKL 852
            +L+ L PH + L+RL+I NY+G   P W+  + + V  NI++     C  L VLP LG+L
Sbjct: 852  ILDGLHPHFQ-LKRLKILNYMGIDFPYWVQRLTDLVAVNIIN-----CRWLSVLPPLGEL 905

Query: 851  QFLEQLWLEDLISVKHLGLLRVGNGDXXXXXXXXXXXXXXXXXXXXXXXXLEWEEEEHDV 672
              L++L L  L S+ H+     G  D                         +W E E+  
Sbjct: 906  PRLKKLSLFGLSSITHINDQVYGTND-------VIFPYLEELHFSELFSWEQWSEAEYK- 957

Query: 671  PTTRSDNTTIIIMPRLHKLKISNCPKLKVVPVYLFPPRLEKLVLRGDVGVVSKSLMFLTH 492
                      +++P L KL I+ C KL ++P+      +++L L      +S    +L  
Sbjct: 958  ----------LLIPHLRKLGINACSKLSLLPIETLSSSVKELHLSSCTSYISMLPAYLKR 1007

Query: 491  NNNLKSLYINSLPHSSLPQGLNQLKSLQELRFYSCKYLDFKPEELKLLTVLRKLEIKRC 315
              +L  L I     ++L    + L  L+ L+  SC  + F+   ++  T L+KLE+ RC
Sbjct: 1008 LTSLTKLSIQDC-SATLLIPCHSLTLLEHLQLESCFDVHFE-GGMQYFTKLKKLEVHRC 1064


>ref|NP_001059807.1| Os07g0521100 [Oryza sativa Japonica Group]
            gi|113611343|dbj|BAF21721.1| Os07g0521100, partial [Oryza
            sativa Japonica Group]
          Length = 578

 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 65/239 (27%), Positives = 107/239 (44%)
 Frame = -1

Query: 1031 VLENLEPHKESLERLEIRNYVGFTLPPWMLSVEESVLSNIVDLKLYWCPNLKVLPALGKL 852
            +L+ L PH + L+RL+I NY+G   P W+  + + V  NI++     C  L VLP LG+L
Sbjct: 193  ILDGLHPHFQ-LKRLKILNYMGIDFPYWVQRLTDLVAVNIIN-----CRWLSVLPPLGEL 246

Query: 851  QFLEQLWLEDLISVKHLGLLRVGNGDXXXXXXXXXXXXXXXXXXXXXXXXLEWEEEEHDV 672
              L++L L  L S+ H+     G  D                         +W E E+  
Sbjct: 247  PRLKKLSLFGLSSITHINDQVYGTND-------VIFPYLEELHFSELFSWEQWSEAEYK- 298

Query: 671  PTTRSDNTTIIIMPRLHKLKISNCPKLKVVPVYLFPPRLEKLVLRGDVGVVSKSLMFLTH 492
                      +++P L KL I+ C KL ++P+      +++L L      +S    +L  
Sbjct: 299  ----------LLIPHLRKLGINACSKLSLLPIETLSSSVKELHLSSCTSYISMLPAYLKR 348

Query: 491  NNNLKSLYINSLPHSSLPQGLNQLKSLQELRFYSCKYLDFKPEELKLLTVLRKLEIKRC 315
              +L  L I     ++L    + L  L+ L+  SC  + F+   ++  T L+KLE+ RC
Sbjct: 349  LTSLTKLSIQDC-SATLLIPCHSLTLLEHLQLESCFDVHFE-GGMQYFTKLKKLEVHRC 405


Top