BLASTX nr result
ID: Coptis24_contig00003805
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00003805 (475 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002517034.1| conserved hypothetical protein [Ricinus comm... 106 2e-21 ref|XP_002314658.1| predicted protein [Populus trichocarpa] gi|2... 102 3e-20 ref|XP_002312563.1| predicted protein [Populus trichocarpa] gi|2... 100 9e-20 ref|XP_003518966.1| PREDICTED: uncharacterized protein LOC100500... 100 1e-19 ref|NP_567436.1| uncharacterized protein [Arabidopsis thaliana] ... 99 4e-19 >ref|XP_002517034.1| conserved hypothetical protein [Ricinus communis] gi|223543669|gb|EEF45197.1| conserved hypothetical protein [Ricinus communis] Length = 76 Score = 106 bits (264), Expect = 2e-21 Identities = 48/59 (81%), Positives = 55/59 (93%) Frame = -2 Query: 465 MSSLGTSKGILEIAKFGIYVSVPIVLMYYFANNTKNMHKFMGSRSYVVYPPEALRPPSP 289 MSSLGTSKGILEIAKFG+YV+VPI+LMY FANNTKN+ KFMG++SY+VYPPE RPPSP Sbjct: 1 MSSLGTSKGILEIAKFGVYVTVPIILMYTFANNTKNLQKFMGNKSYIVYPPEGPRPPSP 59 >ref|XP_002314658.1| predicted protein [Populus trichocarpa] gi|222863698|gb|EEF00829.1| predicted protein [Populus trichocarpa] Length = 76 Score = 102 bits (254), Expect = 3e-20 Identities = 46/59 (77%), Positives = 55/59 (93%) Frame = -2 Query: 465 MSSLGTSKGILEIAKFGIYVSVPIVLMYYFANNTKNMHKFMGSRSYVVYPPEALRPPSP 289 MSSLGTSKGILEIAKFG+YV+VP+VLMY FANNTKN+ KFMG+RSY+V+P + +RPPSP Sbjct: 1 MSSLGTSKGILEIAKFGVYVTVPVVLMYAFANNTKNLQKFMGNRSYIVFPSKIVRPPSP 59 >ref|XP_002312563.1| predicted protein [Populus trichocarpa] gi|222852383|gb|EEE89930.1| predicted protein [Populus trichocarpa] Length = 98 Score = 100 bits (250), Expect = 9e-20 Identities = 47/60 (78%), Positives = 53/60 (88%) Frame = -2 Query: 468 KMSSLGTSKGILEIAKFGIYVSVPIVLMYYFANNTKNMHKFMGSRSYVVYPPEALRPPSP 289 K SSLGTSKGILEIAKFGIYV+VPIVLMY FANNT N+ KFMG+RSY+V+P +RPPSP Sbjct: 22 KKSSLGTSKGILEIAKFGIYVTVPIVLMYSFANNTNNLQKFMGNRSYIVFPSNTVRPPSP 81 >ref|XP_003518966.1| PREDICTED: uncharacterized protein LOC100500641 [Glycine max] gi|255630837|gb|ACU15781.1| unknown [Glycine max] Length = 76 Score = 100 bits (249), Expect = 1e-19 Identities = 46/59 (77%), Positives = 52/59 (88%) Frame = -2 Query: 465 MSSLGTSKGILEIAKFGIYVSVPIVLMYYFANNTKNMHKFMGSRSYVVYPPEALRPPSP 289 MSSLGTSKGILEIAKFG+YV+VPI+LMY FANN N+ KFMG RSY+ YPPEA +PPSP Sbjct: 1 MSSLGTSKGILEIAKFGVYVTVPIILMYTFANNPSNLRKFMGHRSYIEYPPEAEKPPSP 59 >ref|NP_567436.1| uncharacterized protein [Arabidopsis thaliana] gi|21593737|gb|AAM65704.1| unknown [Arabidopsis thaliana] gi|26450874|dbj|BAC42544.1| unknown protein [Arabidopsis thaliana] gi|88010872|gb|ABD38866.1| At4g14615 [Arabidopsis thaliana] gi|332658066|gb|AEE83466.1| uncharacterized protein [Arabidopsis thaliana] Length = 76 Score = 99.0 bits (245), Expect = 4e-19 Identities = 46/59 (77%), Positives = 53/59 (89%) Frame = -2 Query: 465 MSSLGTSKGILEIAKFGIYVSVPIVLMYYFANNTKNMHKFMGSRSYVVYPPEALRPPSP 289 MSS+GTSKG+LEI KFG+YV+VPIVLMY FANN+ N+ KFMG+RSYVVYP EA RPPSP Sbjct: 1 MSSVGTSKGVLEIVKFGVYVAVPIVLMYTFANNSTNIKKFMGNRSYVVYPEEAPRPPSP 59