BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003804
         (979 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332611.1| predicted protein [Populus trichocarpa] gi|2...   181   1e-53
emb|CBI23232.3| unnamed protein product [Vitis vinifera]              172   1e-49
ref|XP_002268030.2| PREDICTED: tyrosyl-DNA phosphodiesterase 2 [...   172   1e-49
ref|XP_003549775.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-l...   172   1e-49
ref|XP_003549776.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-l...   172   1e-49

>ref|XP_002332611.1| predicted protein [Populus trichocarpa] gi|222832812|gb|EEE71289.1|
           predicted protein [Populus trichocarpa]
          Length = 422

 Score =  181 bits (458), Expect(2) = 1e-53
 Identities = 87/162 (53%), Positives = 113/162 (69%)
 Frame = -2

Query: 978 EITPNIYKIFQRSSWWEDYYCSMTEEEASKKQYFCILLSTFRPVDVISAPLGNSKMGREL 799
           E+ P+IY IFQRSSWW+ Y CS++ E AS + YFC+ LS        + P  NS MGREL
Sbjct: 192 EVIPDIYDIFQRSSWWKAYQCSVSSEIASSRGYFCMQLSKLPVKSFSTKPFMNSIMGREL 251

Query: 798 SVTETKVGSNKSLVVATSHLKSSCADPNDPNSQYHQFKRERLLQAKEALTILQKYLNVIF 619
            + E +V   KSLVVATSHL+S C  P   +     F +ER+ QAKEA+ +L+K  NVIF
Sbjct: 252 CIAELEVPGKKSLVVATSHLESPCPAPPKWDQM---FSKERVDQAKEAINLLKKNSNVIF 308

Query: 618 CGDMSWNEKKDGEFPLPDGWVDAWTKLKGEEKGYTFDTKSNE 493
           CGDM+W++K DG+FP PDGWVDAW +LK  + G+T+DTKSN+
Sbjct: 309 CGDMNWDDKLDGQFPFPDGWVDAWVELKPGDNGWTYDTKSNQ 350



 Score = 56.6 bits (135), Expect(2) = 1e-53
 Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 8/52 (15%)
 Frame = -1

Query: 388 NLKGFRLDNIEIIGKDRIPDLSYQRNKKM--------LPVLPSDHYGLLLTI 257
           +L  F++  I++IGKD IP LSY + KK+        LPVLPSDHYGLLLTI
Sbjct: 368 SLCDFKISKIDMIGKDAIPGLSYMKEKKVRKEVKMLELPVLPSDHYGLLLTI 419


>emb|CBI23232.3| unnamed protein product [Vitis vinifera]
          Length = 961

 Score =  172 bits (436), Expect(2) = 1e-49
 Identities = 85/162 (52%), Positives = 108/162 (66%)
 Frame = -2

Query: 978  EITPNIYKIFQRSSWWEDYYCSMTEEEASKKQYFCILLSTFRPVDVISAPLGNSKMGREL 799
            E+TPNIY +FQ+S WW+ Y CS+  E A  + YFC+LLS             NS MGREL
Sbjct: 731  EVTPNIYDVFQQSCWWKVYRCSVPNEMAHLRPYFCMLLSKLPVKSFSCKRFSNSIMGREL 790

Query: 798  SVTETKVGSNKSLVVATSHLKSSCADPNDPNSQYHQFKRERLLQAKEALTILQKYLNVIF 619
             + E +V + K LV+ATSHL+S C  P   +  Y    +ER+ QAKEAL +L K  NVIF
Sbjct: 791  CIAELEVQAGKPLVLATSHLESPCPAPPKWDQMY---SKERVDQAKEALNLLTKNPNVIF 847

Query: 618  CGDMSWNEKKDGEFPLPDGWVDAWTKLKGEEKGYTFDTKSNE 493
             GDM+W+EK DG+FPLPDGWVDAW  L+  E G+T+DTKSN+
Sbjct: 848  GGDMNWDEKSDGQFPLPDGWVDAWADLRPGENGWTYDTKSNQ 889



 Score = 51.6 bits (122), Expect(2) = 1e-49
 Identities = 27/51 (52%), Positives = 34/51 (66%), Gaps = 8/51 (15%)
 Frame = -1

Query: 385  LKGFRLDNIEIIGKDRIPDLSYQRNKKM--------LPVLPSDHYGLLLTI 257
            L  F++  I++IG + IP LSY + KK+        LPVLPSDHYGLLLTI
Sbjct: 908  LHDFKISKIDMIGMEPIPGLSYCKEKKVRKEMQQLVLPVLPSDHYGLLLTI 958


>ref|XP_002268030.2| PREDICTED: tyrosyl-DNA phosphodiesterase 2 [Vitis vinifera]
          Length = 447

 Score =  172 bits (436), Expect(2) = 1e-49
 Identities = 85/162 (52%), Positives = 108/162 (66%)
 Frame = -2

Query: 978 EITPNIYKIFQRSSWWEDYYCSMTEEEASKKQYFCILLSTFRPVDVISAPLGNSKMGREL 799
           E+TPNIY +FQ+S WW+ Y CS+  E A  + YFC+LLS             NS MGREL
Sbjct: 217 EVTPNIYDVFQQSCWWKVYRCSVPNEMAHLRPYFCMLLSKLPVKSFSCKRFSNSIMGREL 276

Query: 798 SVTETKVGSNKSLVVATSHLKSSCADPNDPNSQYHQFKRERLLQAKEALTILQKYLNVIF 619
            + E +V + K LV+ATSHL+S C  P   +  Y    +ER+ QAKEAL +L K  NVIF
Sbjct: 277 CIAELEVQAGKPLVLATSHLESPCPAPPKWDQMY---SKERVDQAKEALNLLTKNPNVIF 333

Query: 618 CGDMSWNEKKDGEFPLPDGWVDAWTKLKGEEKGYTFDTKSNE 493
            GDM+W+EK DG+FPLPDGWVDAW  L+  E G+T+DTKSN+
Sbjct: 334 GGDMNWDEKSDGQFPLPDGWVDAWADLRPGENGWTYDTKSNQ 375



 Score = 51.6 bits (122), Expect(2) = 1e-49
 Identities = 27/51 (52%), Positives = 34/51 (66%), Gaps = 8/51 (15%)
 Frame = -1

Query: 385 LKGFRLDNIEIIGKDRIPDLSYQRNKKM--------LPVLPSDHYGLLLTI 257
           L  F++  I++IG + IP LSY + KK+        LPVLPSDHYGLLLTI
Sbjct: 394 LHDFKISKIDMIGMEPIPGLSYCKEKKVRKEMQQLVLPVLPSDHYGLLLTI 444


>ref|XP_003549775.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-like isoform 1 [Glycine
           max]
          Length = 402

 Score =  172 bits (437), Expect(2) = 1e-49
 Identities = 79/162 (48%), Positives = 112/162 (69%)
 Frame = -2

Query: 978 EITPNIYKIFQRSSWWEDYYCSMTEEEASKKQYFCILLSTFRPVDVISAPLGNSKMGREL 799
           E+TPNIY IF+ S+WW  Y CS++ E A  + YFC+LLS        + P  NS MGREL
Sbjct: 172 EVTPNIYDIFKGSAWWSVYCCSVSSEMAYSRPYFCMLLSKLPVKSFSNKPFSNSIMGREL 231

Query: 798 SVTETKVGSNKSLVVATSHLKSSCADPNDPNSQYHQFKRERLLQAKEALTILQKYLNVIF 619
            + E +  S K LV+ATSHL+S C  P   +  Y    +ER++QA EA+ +L+K  +V+F
Sbjct: 232 CIAEVEAASGKPLVIATSHLESPCPAPPKWDQMY---SKERVVQANEAINLLKKQPSVVF 288

Query: 618 CGDMSWNEKKDGEFPLPDGWVDAWTKLKGEEKGYTFDTKSNE 493
            GDM+WN+++DG++PL DGWVDAW++L+  E G+T+DTKSN+
Sbjct: 289 GGDMNWNDQQDGQYPLQDGWVDAWSQLRPNESGWTYDTKSNQ 330



 Score = 50.8 bits (120), Expect(2) = 1e-49
 Identities = 24/48 (50%), Positives = 34/48 (70%), Gaps = 8/48 (16%)
 Frame = -1

Query: 376 FRLDNIEIIGKDRIPDLSYQRNKKM--------LPVLPSDHYGLLLTI 257
           F++ ++++IG + IP +SY + KK+        LPVLPSDHYGLLLTI
Sbjct: 352 FKITSVDMIGMEAIPGVSYNKEKKVRKEIKQLVLPVLPSDHYGLLLTI 399


>ref|XP_003549776.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-like isoform 2 [Glycine
           max]
          Length = 401

 Score =  172 bits (437), Expect(2) = 1e-49
 Identities = 79/162 (48%), Positives = 112/162 (69%)
 Frame = -2

Query: 978 EITPNIYKIFQRSSWWEDYYCSMTEEEASKKQYFCILLSTFRPVDVISAPLGNSKMGREL 799
           E+TPNIY IF+ S+WW  Y CS++ E A  + YFC+LLS        + P  NS MGREL
Sbjct: 171 EVTPNIYDIFKGSAWWSVYCCSVSSEMAYSRPYFCMLLSKLPVKSFSNKPFSNSIMGREL 230

Query: 798 SVTETKVGSNKSLVVATSHLKSSCADPNDPNSQYHQFKRERLLQAKEALTILQKYLNVIF 619
            + E +  S K LV+ATSHL+S C  P   +  Y    +ER++QA EA+ +L+K  +V+F
Sbjct: 231 CIAEVEAASGKPLVIATSHLESPCPAPPKWDQMY---SKERVVQANEAINLLKKQPSVVF 287

Query: 618 CGDMSWNEKKDGEFPLPDGWVDAWTKLKGEEKGYTFDTKSNE 493
            GDM+WN+++DG++PL DGWVDAW++L+  E G+T+DTKSN+
Sbjct: 288 GGDMNWNDQQDGQYPLQDGWVDAWSQLRPNESGWTYDTKSNQ 329



 Score = 50.8 bits (120), Expect(2) = 1e-49
 Identities = 24/48 (50%), Positives = 34/48 (70%), Gaps = 8/48 (16%)
 Frame = -1

Query: 376 FRLDNIEIIGKDRIPDLSYQRNKKM--------LPVLPSDHYGLLLTI 257
           F++ ++++IG + IP +SY + KK+        LPVLPSDHYGLLLTI
Sbjct: 351 FKITSVDMIGMEAIPGVSYNKEKKVRKEIKQLVLPVLPSDHYGLLLTI 398