BLASTX nr result

ID: Coptis24_contig00003803 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003803
         (2162 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272502.1| PREDICTED: CBS domain-containing protein CBS...   785   0.0  
emb|CBI21626.3| unnamed protein product [Vitis vinifera]              783   0.0  
ref|XP_002528012.1| conserved hypothetical protein [Ricinus comm...   782   0.0  
gb|ABK96353.1| unknown [Populus trichocarpa x Populus deltoides]      773   0.0  
ref|XP_002309952.1| predicted protein [Populus trichocarpa] gi|2...   767   0.0  

>ref|XP_002272502.1| PREDICTED: CBS domain-containing protein CBSCBSPB3-like [Vitis
            vinifera]
          Length = 539

 Score =  785 bits (2027), Expect = 0.0
 Identities = 404/506 (79%), Positives = 450/506 (88%), Gaps = 1/506 (0%)
 Frame = +2

Query: 437  SKPSSPPPLRQTSVGGERTVKKLRLSKALTIPEGTTVSDACRRMASRRVDAVLLTDTNAL 616
            +K SSP  L    V G RTVKKLRLSKALTIPEGTTVSDACRRMA+RRVDAVLLTD+NAL
Sbjct: 38   AKASSPTHL----VDGVRTVKKLRLSKALTIPEGTTVSDACRRMAARRVDAVLLTDSNAL 93

Query: 617  LSGIVTDKDIATRVIAEGLRPEQTIVSKIMTRNPVFVGSDSLAIEALQKMVQGKFRHLPV 796
            LSGIVTDKDIATRVIAE LRPEQT+VSKIMTR+P+FV SDSLAIEAL+KMVQGKFRHLPV
Sbjct: 94   LSGIVTDKDIATRVIAEELRPEQTVVSKIMTRHPIFVNSDSLAIEALEKMVQGKFRHLPV 153

Query: 797  VENGEVVAILDITKCLYDAISRMEKAAEQGSALAAAVEGVERQWGSNFSAPYAFIETLRE 976
            VENGEV+AILDITKCLYDAISRMEKAAE GSA+AAAVEGVERQWGSNF+APY+FIETLRE
Sbjct: 154  VENGEVIAILDITKCLYDAISRMEKAAEHGSAIAAAVEGVERQWGSNFTAPYSFIETLRE 213

Query: 977  RMFKPALSTIIAENTKVALVSPSDPVYVAAKKMRDFRVNSVIITTGNKPQGILTSKDVLM 1156
            RMFKPALSTIIAENTKVA+VSPSDP+ VAAKKMR++RVNSVII TG+K QGILTSKD+LM
Sbjct: 214  RMFKPALSTIIAENTKVAIVSPSDPISVAAKKMREYRVNSVIIMTGSKIQGILTSKDILM 273

Query: 1157 RVVAQNLSPELTLVEKVMTPNPECATMETTILDALHIMHDGKFLHLPVVDKDGCIAACVD 1336
            RVVAQNLSPELTLVEKVMTPNPECAT+ETTILDALHIMHDGKFLHLPVVDKDG IAACVD
Sbjct: 274  RVVAQNLSPELTLVEKVMTPNPECATLETTILDALHIMHDGKFLHLPVVDKDGGIAACVD 333

Query: 1337 VLQITHAAISMVEGSPGGVNDMTNTMMQKFWDSALALEPPDDEYDTHSELSGLMTSDGAE 1516
            VLQITHAAISMVE S G VN++TNT+MQKFWDS LALEPPDD YDT SELS +M +DGAE
Sbjct: 334  VLQITHAAISMVENSSGAVNEVTNTIMQKFWDSTLALEPPDD-YDTQSELSAVMAADGAE 392

Query: 1517 PGKSMYPSLGLGNSFAFKFEDRKGRVHRFNFGTENLEELISAVTQRMGTNNDDNRPQLLY 1696
            PG++MYPSLGLGNSFAFKFED KGRVHRFN GTE+L+EL+SAV QR+G + D +RPQ+LY
Sbjct: 393  PGRNMYPSLGLGNSFAFKFEDIKGRVHRFNCGTESLDELVSAVMQRIGASTDQDRPQILY 452

Query: 1697 EDDEGDRVILATDGDLTGAVSHARSVGSKVLRLHLDYSGSSNQAAQPSM-TTTTQKSALV 1873
            EDDEGD+V+L+TD DL  AVSHAR VG KVLRL LDYS S  +  +P   T T + +  V
Sbjct: 453  EDDEGDKVLLSTDSDLVSAVSHARVVGQKVLRLQLDYSESIQETRRPQTGTDTVRGTGGV 512

Query: 1874 SLQTGVLVGAAALTSIGILVYLKRTK 1951
             L +G+L  A  +T++G++VYLKR K
Sbjct: 513  FLHSGILASAVIITAVGLMVYLKRAK 538


>emb|CBI21626.3| unnamed protein product [Vitis vinifera]
          Length = 556

 Score =  783 bits (2021), Expect = 0.0
 Identities = 399/493 (80%), Positives = 444/493 (90%), Gaps = 1/493 (0%)
 Frame = +2

Query: 476  VGGERTVKKLRLSKALTIPEGTTVSDACRRMASRRVDAVLLTDTNALLSGIVTDKDIATR 655
            V G RTVKKLRLSKALTIPEGTTVSDACRRMA+RRVDAVLLTD+NALLSGIVTDKDIATR
Sbjct: 64   VDGVRTVKKLRLSKALTIPEGTTVSDACRRMAARRVDAVLLTDSNALLSGIVTDKDIATR 123

Query: 656  VIAEGLRPEQTIVSKIMTRNPVFVGSDSLAIEALQKMVQGKFRHLPVVENGEVVAILDIT 835
            VIAE LRPEQT+VSKIMTR+P+FV SDSLAIEAL+KMVQGKFRHLPVVENGEV+AILDIT
Sbjct: 124  VIAEELRPEQTVVSKIMTRHPIFVNSDSLAIEALEKMVQGKFRHLPVVENGEVIAILDIT 183

Query: 836  KCLYDAISRMEKAAEQGSALAAAVEGVERQWGSNFSAPYAFIETLRERMFKPALSTIIAE 1015
            KCLYDAISRMEKAAE GSA+AAAVEGVERQWGSNF+APY+FIETLRERMFKPALSTIIAE
Sbjct: 184  KCLYDAISRMEKAAEHGSAIAAAVEGVERQWGSNFTAPYSFIETLRERMFKPALSTIIAE 243

Query: 1016 NTKVALVSPSDPVYVAAKKMRDFRVNSVIITTGNKPQGILTSKDVLMRVVAQNLSPELTL 1195
            NTKVA+VSPSDP+ VAAKKMR++RVNSVII TG+K QGILTSKD+LMRVVAQNLSPELTL
Sbjct: 244  NTKVAIVSPSDPISVAAKKMREYRVNSVIIMTGSKIQGILTSKDILMRVVAQNLSPELTL 303

Query: 1196 VEKVMTPNPECATMETTILDALHIMHDGKFLHLPVVDKDGCIAACVDVLQITHAAISMVE 1375
            VEKVMTPNPECAT+ETTILDALHIMHDGKFLHLPVVDKDG IAACVDVLQITHAAISMVE
Sbjct: 304  VEKVMTPNPECATLETTILDALHIMHDGKFLHLPVVDKDGGIAACVDVLQITHAAISMVE 363

Query: 1376 GSPGGVNDMTNTMMQKFWDSALALEPPDDEYDTHSELSGLMTSDGAEPGKSMYPSLGLGN 1555
             S G VN++TNT+MQKFWDS LALEPPDD YDT SELS +M +DGAEPG++MYPSLGLGN
Sbjct: 364  NSSGAVNEVTNTIMQKFWDSTLALEPPDD-YDTQSELSAVMAADGAEPGRNMYPSLGLGN 422

Query: 1556 SFAFKFEDRKGRVHRFNFGTENLEELISAVTQRMGTNNDDNRPQLLYEDDEGDRVILATD 1735
            SFAFKFED KGRVHRFN GTE+L+EL+SAV QR+G + D +RPQ+LYEDDEGD+V+L+TD
Sbjct: 423  SFAFKFEDIKGRVHRFNCGTESLDELVSAVMQRIGASTDQDRPQILYEDDEGDKVLLSTD 482

Query: 1736 GDLTGAVSHARSVGSKVLRLHLDYSGSSNQAAQPSM-TTTTQKSALVSLQTGVLVGAAAL 1912
             DL  AVSHAR VG KVLRL LDYS S  +  +P   T T + +  V L +G+L  A  +
Sbjct: 483  SDLVSAVSHARVVGQKVLRLQLDYSESIQETRRPQTGTDTVRGTGGVFLHSGILASAVII 542

Query: 1913 TSIGILVYLKRTK 1951
            T++G++VYLKR K
Sbjct: 543  TAVGLMVYLKRAK 555


>ref|XP_002528012.1| conserved hypothetical protein [Ricinus communis]
            gi|223532581|gb|EEF34368.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 546

 Score =  782 bits (2020), Expect = 0.0
 Identities = 399/505 (79%), Positives = 438/505 (86%)
 Frame = +2

Query: 437  SKPSSPPPLRQTSVGGERTVKKLRLSKALTIPEGTTVSDACRRMASRRVDAVLLTDTNAL 616
            +KPSSPPP + + VGGERTVKKLRLSKALTIPEGTTVSDACRRMA+RRVDAVLLTD NAL
Sbjct: 43   NKPSSPPP-QSSVVGGERTVKKLRLSKALTIPEGTTVSDACRRMAARRVDAVLLTDANAL 101

Query: 617  LSGIVTDKDIATRVIAEGLRPEQTIVSKIMTRNPVFVGSDSLAIEALQKMVQGKFRHLPV 796
            LSGIVTDKDI+ RVIAEGLRPEQTIVSKIMTRNP+FV SDSLAI+ALQKMVQGKFRHLPV
Sbjct: 102  LSGIVTDKDISARVIAEGLRPEQTIVSKIMTRNPIFVASDSLAIDALQKMVQGKFRHLPV 161

Query: 797  VENGEVVAILDITKCLYDAISRMEKAAEQGSALAAAVEGVERQWGSNFSAPYAFIETLRE 976
            VENGEV+A+LDITKCLYDAISRMEK AEQGSA+AAAVEGVERQWGSNFSAPYAFIETLRE
Sbjct: 162  VENGEVIALLDITKCLYDAISRMEKVAEQGSAIAAAVEGVERQWGSNFSAPYAFIETLRE 221

Query: 977  RMFKPALSTIIAENTKVALVSPSDPVYVAAKKMRDFRVNSVIITTGNKPQGILTSKDVLM 1156
            RMFKP+LSTII E TKVA+ SPSDPVYVAAK+MRD +VNSVII TGNK QGILTSKD+LM
Sbjct: 222  RMFKPSLSTIIGEQTKVAIASPSDPVYVAAKRMRDLQVNSVIIVTGNKIQGILTSKDILM 281

Query: 1157 RVVAQNLSPELTLVEKVMTPNPECATMETTILDALHIMHDGKFLHLPVVDKDGCIAACVD 1336
            RVVA N+SPELTLVEKVMT NPECAT+ETTILDALHIMHDGKFLHLPVVDKDG   ACVD
Sbjct: 282  RVVAHNISPELTLVEKVMTSNPECATLETTILDALHIMHDGKFLHLPVVDKDGSATACVD 341

Query: 1337 VLQITHAAISMVEGSPGGVNDMTNTMMQKFWDSALALEPPDDEYDTHSELSGLMTSDGAE 1516
            VLQITHAAISMVE S G  ND+ NTMMQKFWDSALALEPPDD YDT SE+S +MTSDG +
Sbjct: 342  VLQITHAAISMVENSSGAANDVANTMMQKFWDSALALEPPDD-YDTQSEMSAIMTSDGTD 400

Query: 1517 PGKSMYPSLGLGNSFAFKFEDRKGRVHRFNFGTENLEELISAVTQRMGTNNDDNRPQLLY 1696
             GK  YP +GLGNSFAFKF D KGRVHRFN GTENL+EL SA+ QR+G +     PQLLY
Sbjct: 401  LGKYAYPPVGLGNSFAFKFVDLKGRVHRFNCGTENLDELTSALLQRIGVSLGQEHPQLLY 460

Query: 1697 EDDEGDRVILATDGDLTGAVSHARSVGSKVLRLHLDYSGSSNQAAQPSMTTTTQKSALVS 1876
            EDDEGD+V+L TDGDL  A++HA++ G KVL+LHLD+S SS        T TTQ+S   S
Sbjct: 461  EDDEGDKVLLVTDGDLISAINHAKTAGLKVLKLHLDFSDSSRPIRSQPDTMTTQRSRWGS 520

Query: 1877 LQTGVLVGAAALTSIGILVYLKRTK 1951
              + +L GA  LT IG+LVYLKR+K
Sbjct: 521  FHSAILAGAVVLTGIGVLVYLKRSK 545


>gb|ABK96353.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 555

 Score =  773 bits (1996), Expect = 0.0
 Identities = 397/507 (78%), Positives = 441/507 (86%), Gaps = 2/507 (0%)
 Frame = +2

Query: 437  SKPSSPPPLRQTSVGGERTVKKLRLSKALTIPEGTTVSDACRRMASRRVDAVLLTDTNAL 616
            SKPSSP     +SVGGERTVKKL+LSKALTIPEGTTV DACRRMA+RRV+AVLLTD NAL
Sbjct: 53   SKPSSPNA--PSSVGGERTVKKLKLSKALTIPEGTTVFDACRRMAARRVNAVLLTDANAL 110

Query: 617  LSGIVTDKDIATRVIAEGLRPEQTIVSKIMTRNPVFVGSDSLAIEALQKMVQGKFRHLPV 796
            LSGIVTDKDI+ RVIAEGLRPE TIVSKIMTRNP+FV SDSLAIEALQKMVQGKFRHLPV
Sbjct: 111  LSGIVTDKDISARVIAEGLRPEHTIVSKIMTRNPIFVTSDSLAIEALQKMVQGKFRHLPV 170

Query: 797  VENGEVVAILDITKCLYDAISRMEKAAEQGSALAAAVEGVERQWGSNFSAPYAFIETLRE 976
            VENGEV+A+LDIT+CLYDAISRMEKAAEQGSA+AAAVEGVERQWG+NF+APYAFIETLRE
Sbjct: 171  VENGEVIALLDITRCLYDAISRMEKAAEQGSAIAAAVEGVERQWGNNFTAPYAFIETLRE 230

Query: 977  RMFKPALSTIIAENTKVALVSPSDPVYVAAKKMRDFRVNSVIITTGNKPQGILTSKDVLM 1156
            RMFKP+LSTII E +KVA+ SPSDPVY A KKMR+ RVNSVI+ TGNK QGILTSKD+LM
Sbjct: 231  RMFKPSLSTIIGEQSKVAIASPSDPVYAATKKMRELRVNSVIVVTGNKIQGILTSKDILM 290

Query: 1157 RVVAQNLSPELTLVEKVMTPNPECATMETTILDALHIMHDGKFLHLPVVDKDGCIAACVD 1336
            RVVAQNLSPELTLVEKVMT NPEC T+ETTILDALH+MHDGKFLHLPVVDKDG +AAC+D
Sbjct: 291  RVVAQNLSPELTLVEKVMTLNPECVTLETTILDALHVMHDGKFLHLPVVDKDGSVAACLD 350

Query: 1337 VLQITHAAISMVEGSPGGVNDMTNTMMQKFWDSALALEPPDDEYDTHSELSGLMTSDGAE 1516
            VLQITHAAIS+VE S G VND+ NTMMQKFWDSALALEP DD YDT SE+S LM SD  E
Sbjct: 351  VLQITHAAISLVESSSGAVNDVANTMMQKFWDSALALEPADD-YDTQSEMSALMASDATE 409

Query: 1517 PGKSMYPSLGLGNSFAFKFEDRKGRVHRFNFGTENLEELISAVTQRMGTNNDDNRPQLLY 1696
             G+  YPSLGLGNSFAFKF+D KGRVHR N GTENL EL+S V QR+G +N+ +RPQLLY
Sbjct: 410  LGR--YPSLGLGNSFAFKFQDLKGRVHRLNCGTENLNELLSTVLQRIGADNEQDRPQLLY 467

Query: 1697 EDDEGDRVILATDGDLTGAVSHARSVGSKVLRLHLDYSGSSNQAAQPS--MTTTTQKSAL 1870
            EDDEGD+V+LATDGDL  AV+HARS G KVLRLHLDY   S+Q   PS   TTTTQ++ L
Sbjct: 468  EDDEGDKVLLATDGDLISAVNHARSGGLKVLRLHLDYYDPSHQTTSPSSTTTTTTQRAGL 527

Query: 1871 VSLQTGVLVGAAALTSIGILVYLKRTK 1951
            VSL++G+L     L  + ++VYLKR K
Sbjct: 528  VSLRSGILAAGVVLAGVAVVVYLKRAK 554


>ref|XP_002309952.1| predicted protein [Populus trichocarpa] gi|222852855|gb|EEE90402.1|
            predicted protein [Populus trichocarpa]
          Length = 488

 Score =  767 bits (1981), Expect = 0.0
 Identities = 390/491 (79%), Positives = 431/491 (87%), Gaps = 2/491 (0%)
 Frame = +2

Query: 482  GERTVKKLRLSKALTIPEGTTVSDACRRMASRRVDAVLLTDTNALLSGIVTDKDIATRVI 661
            GERTVKKLRLSKALTIPEGTTVSDACRRMA+RRV+A LLTD NALLSGIVTDKDI+ RVI
Sbjct: 1    GERTVKKLRLSKALTIPEGTTVSDACRRMAARRVNAALLTDANALLSGIVTDKDISARVI 60

Query: 662  AEGLRPEQTIVSKIMTRNPVFVGSDSLAIEALQKMVQGKFRHLPVVENGEVVAILDITKC 841
            AEGLRP+QTIVSKIMTRNP+FV SDSLAIEALQKMVQGKFRHLPVVENGEV+A+LDITKC
Sbjct: 61   AEGLRPDQTIVSKIMTRNPIFVNSDSLAIEALQKMVQGKFRHLPVVENGEVIALLDITKC 120

Query: 842  LYDAISRMEKAAEQGSALAAAVEGVERQWGSNFSAPYAFIETLRERMFKPALSTIIAENT 1021
            LYDAISRMEKAAEQGSA+AAAVEGVERQWG+NF+AP+ FIETLRERMFKP+LSTII E T
Sbjct: 121  LYDAISRMEKAAEQGSAIAAAVEGVERQWGNNFTAPHTFIETLRERMFKPSLSTIIGEQT 180

Query: 1022 KVALVSPSDPVYVAAKKMRDFRVNSVIITTGNKPQGILTSKDVLMRVVAQNLSPELTLVE 1201
            KVA+ SPSDPVYVAAKKMR+ RVNS I+ TGNK QGILTSKD+LMRVVAQNLSPELTLVE
Sbjct: 181  KVAVASPSDPVYVAAKKMRELRVNSAIVVTGNKIQGILTSKDILMRVVAQNLSPELTLVE 240

Query: 1202 KVMTPNPECATMETTILDALHIMHDGKFLHLPVVDKDGCIAACVDVLQITHAAISMVEGS 1381
            KVMTPNPEC T+ETT+LDALH+MHDGKFLHLPV+DKDG  AACVDVLQITHAAISMVE S
Sbjct: 241  KVMTPNPECVTLETTVLDALHVMHDGKFLHLPVLDKDGSAAACVDVLQITHAAISMVESS 300

Query: 1382 PGGVNDMTNTMMQKFWDSALALEPPDDEYDTHSELSGLMTSDGAEPGKSMYPSLGLGNSF 1561
             G VND  +TMMQKFWDSALALEPPDD YDT SE+S LM SDGAE G+  YPSLGLGNSF
Sbjct: 301  SGAVNDAASTMMQKFWDSALALEPPDD-YDTQSEMSALMASDGAELGR--YPSLGLGNSF 357

Query: 1562 AFKFEDRKGRVHRFNFGTENLEELISAVTQRMGTNNDDNRPQLLYEDDEGDRVILATDGD 1741
            AFKFED KGR+HR N  TENL+EL+S V QR+G  ++ +RPQLLYEDD+GD+V+LATDGD
Sbjct: 358  AFKFEDLKGRIHRLNCCTENLDELLSTVLQRIGAESEQDRPQLLYEDDDGDKVLLATDGD 417

Query: 1742 LTGAVSHARSVGSKVLRLHLDYSGSSNQAAQP--SMTTTTQKSALVSLQTGVLVGAAALT 1915
            L GAVSHARSVG KVLRLHLDY   SNQ   P  + TT TQ+  LVS ++G+ V    L 
Sbjct: 418  LIGAVSHARSVGLKVLRLHLDYYDPSNQTTSPLDTTTTATQRIGLVSFRSGIFVAGVVLA 477

Query: 1916 SIGILVYLKRT 1948
             I ++ YLKR+
Sbjct: 478  GIAVVAYLKRS 488


Top