BLASTX nr result

ID: Coptis24_contig00003784 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003784
         (703 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40089.1|ATP4_IPOBA RecName: Full=ATP synthase subunit delta'...   200   3e-49
ref|XP_002267995.1| PREDICTED: ATP synthase subunit delta', mito...   199   5e-49
emb|CAN84027.1| hypothetical protein VITISV_044183 [Vitis vinifera]   199   5e-49
gb|ACN26750.1| unknown [Zea mays] gi|414590341|tpg|DAA40912.1| T...   197   2e-48
ref|XP_004133965.1| PREDICTED: ATP synthase subunit delta', mito...   196   3e-48

>sp|Q40089.1|ATP4_IPOBA RecName: Full=ATP synthase subunit delta', mitochondrial; AltName:
           Full=F-ATPase delta' subunit; Flags: Precursor
           gi|217938|dbj|BAA01511.1| mitochondrial F1-ATPase delta
           subunit [Ipomoea batatas]
          Length = 200

 Score =  200 bits (508), Expect = 3e-49
 Identities = 100/114 (87%), Positives = 110/114 (96%)
 Frame = +1

Query: 163 VEMVIIPATTGQMGVLPGHVATIAELKPGVLSVHDGNDVSKYFVSSGFAFIHANSFADIV 342
           V+MVIIPATTGQMGVLPGHVATIAELKPGV+SVH+GNDVSKYFVS GFAFIHANSFADI+
Sbjct: 87  VDMVIIPATTGQMGVLPGHVATIAELKPGVMSVHEGNDVSKYFVSGGFAFIHANSFADII 146

Query: 343 AVEAVPLDQIDASQVQKGLAEFNQKLSSASTDLEKAEAQIGVDVHSALNFALSG 504
           AVEAVPLD+IDA+ VQKGLAEF QKL++ASTD+EKAEAQIGVDVHSALN AL+G
Sbjct: 147 AVEAVPLDRIDANLVQKGLAEFTQKLNTASTDVEKAEAQIGVDVHSALNAALTG 200


>ref|XP_002267995.1| PREDICTED: ATP synthase subunit delta', mitochondrial [Vitis
           vinifera] gi|297734660|emb|CBI16711.3| unnamed protein
           product [Vitis vinifera]
          Length = 206

 Score =  199 bits (506), Expect = 5e-49
 Identities = 99/114 (86%), Positives = 109/114 (95%)
 Frame = +1

Query: 163 VEMVIIPATTGQMGVLPGHVATIAELKPGVLSVHDGNDVSKYFVSSGFAFIHANSFADIV 342
           V+MVIIPATTGQMGVLPGHVATIAELKPGV+SVH+GNDV+KYF+SSGFA IHANSFADI+
Sbjct: 93  VDMVIIPATTGQMGVLPGHVATIAELKPGVMSVHEGNDVTKYFISSGFAVIHANSFADII 152

Query: 343 AVEAVPLDQIDASQVQKGLAEFNQKLSSASTDLEKAEAQIGVDVHSALNFALSG 504
           A+EAVP+DQID S VQKGLA+F QKLSSASTDLEKAEAQIGVDVHSALN AL+G
Sbjct: 153 AIEAVPIDQIDPSLVQKGLADFTQKLSSASTDLEKAEAQIGVDVHSALNSALTG 206


>emb|CAN84027.1| hypothetical protein VITISV_044183 [Vitis vinifera]
          Length = 206

 Score =  199 bits (506), Expect = 5e-49
 Identities = 99/114 (86%), Positives = 109/114 (95%)
 Frame = +1

Query: 163 VEMVIIPATTGQMGVLPGHVATIAELKPGVLSVHDGNDVSKYFVSSGFAFIHANSFADIV 342
           V+MVIIPATTGQMGVLPGHVATIAELKPGV+SVH+GNDV+KYF+SSGFA IHANSFADI+
Sbjct: 93  VDMVIIPATTGQMGVLPGHVATIAELKPGVMSVHEGNDVTKYFISSGFAVIHANSFADII 152

Query: 343 AVEAVPLDQIDASQVQKGLAEFNQKLSSASTDLEKAEAQIGVDVHSALNFALSG 504
           A+EAVP+DQID S VQKGLA+F QKLSSASTDLEKAEAQIGVDVHSALN AL+G
Sbjct: 153 AIEAVPIDQIDPSLVQKGLADFTQKLSSASTDLEKAEAQIGVDVHSALNSALTG 206


>gb|ACN26750.1| unknown [Zea mays] gi|414590341|tpg|DAA40912.1| TPA: ATP synthase
           delta chain [Zea mays]
          Length = 203

 Score =  197 bits (501), Expect = 2e-48
 Identities = 99/114 (86%), Positives = 107/114 (93%)
 Frame = +1

Query: 163 VEMVIIPATTGQMGVLPGHVATIAELKPGVLSVHDGNDVSKYFVSSGFAFIHANSFADIV 342
           V+MVI+PATTGQMGVLPGHVATIAELKPGVLSVH+GNDVSKYFVSSGFAF+HANS ADIV
Sbjct: 90  VDMVIVPATTGQMGVLPGHVATIAELKPGVLSVHEGNDVSKYFVSSGFAFVHANSIADIV 149

Query: 343 AVEAVPLDQIDASQVQKGLAEFNQKLSSASTDLEKAEAQIGVDVHSALNFALSG 504
           AVEA+P+DQID + VQKGLAEF  KL SASTDLEKAEAQIGVDVHSALN AL+G
Sbjct: 150 AVEAIPVDQIDPALVQKGLAEFTAKLGSASTDLEKAEAQIGVDVHSALNAALTG 203


>ref|XP_004133965.1| PREDICTED: ATP synthase subunit delta', mitochondrial-like [Cucumis
           sativus] gi|449519178|ref|XP_004166612.1| PREDICTED: ATP
           synthase subunit delta', mitochondrial-like [Cucumis
           sativus]
          Length = 200

 Score =  196 bits (499), Expect = 3e-48
 Identities = 97/114 (85%), Positives = 109/114 (95%)
 Frame = +1

Query: 163 VEMVIIPATTGQMGVLPGHVATIAELKPGVLSVHDGNDVSKYFVSSGFAFIHANSFADIV 342
           V+MVIIPATTGQMGVLPGHV TIAELKPGVLSVH+G+++ KYFVSSGFAFIH NS+ADI+
Sbjct: 87  VDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVHEGSEIKKYFVSSGFAFIHGNSYADII 146

Query: 343 AVEAVPLDQIDASQVQKGLAEFNQKLSSASTDLEKAEAQIGVDVHSALNFALSG 504
           AVEAVP++QIDA+QVQKGLAEF QKL+SASTDLEKAEAQIGVDVHSALN AL+G
Sbjct: 147 AVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSALNSALTG 200


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