BLASTX nr result

ID: Coptis24_contig00003780 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003780
         (697 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273234.1| PREDICTED: uncharacterized protein LOC100262...   215   6e-54
ref|XP_002523846.1| conserved hypothetical protein [Ricinus comm...   203   3e-50
ref|XP_002312836.1| predicted protein [Populus trichocarpa] gi|2...   196   5e-48
emb|CAN69049.1| hypothetical protein VITISV_001510 [Vitis vinifera]   194   2e-47
ref|XP_003540808.1| PREDICTED: uncharacterized protein LOC100779...   193   3e-47

>ref|XP_002273234.1| PREDICTED: uncharacterized protein LOC100262096 [Vitis vinifera]
           gi|296084875|emb|CBI28284.3| unnamed protein product
           [Vitis vinifera]
          Length = 315

 Score =  215 bits (548), Expect = 6e-54
 Identities = 105/139 (75%), Positives = 120/139 (86%)
 Frame = -2

Query: 696 GFCLIVLSVQVTISYAVGVLLSCFYLQLLYQYVDNLSRESVPQVFMKKKSKKLGIRSEDL 517
           G+CLIVLS Q  ISYA GVL SC YLQLLYQ+ DNLS+E+VPQ+FMKKKSKK+GIRS+DL
Sbjct: 173 GYCLIVLSAQAAISYAAGVLFSCLYLQLLYQHADNLSKEAVPQIFMKKKSKKIGIRSQDL 232

Query: 516 SNSLERLIKGSSIALSSQRLMIPAIIYGLWGLSNHFSYKFLDFQVVPAIFGMLAYKAAAL 337
            + LE+ IKGS IALSS RL+IPA IYGLW LS HF+  F DFQ+VPA+FGM AYKAAAL
Sbjct: 233 EDLLEKTIKGSGIALSSPRLVIPAAIYGLWILSQHFAGDFFDFQLVPAMFGMFAYKAAAL 292

Query: 336 VQVYRDNEDLEFVFPDSEE 280
           VQVYRDNEDL+FVFPD+EE
Sbjct: 293 VQVYRDNEDLQFVFPDNEE 311


>ref|XP_002523846.1| conserved hypothetical protein [Ricinus communis]
           gi|223536934|gb|EEF38572.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 314

 Score =  203 bits (516), Expect = 3e-50
 Identities = 100/141 (70%), Positives = 117/141 (82%), Gaps = 1/141 (0%)
 Frame = -2

Query: 696 GFCLIVLSVQVTISYAVGVLLSCFYLQLLYQYVDNLSRESVPQVFMKKKSKKLGIRSEDL 517
           G+CLI LSVQ  ISYA+GVL SC YLQLL ++ DNLSRE +P +FMKKKSKK+GIRSEDL
Sbjct: 171 GYCLIALSVQAAISYAIGVLFSCLYLQLLCKHADNLSREMIPPIFMKKKSKKIGIRSEDL 230

Query: 516 SNSLERLIKGSSIALSSQRLMIPAIIYGLWGLSNH-FSYKFLDFQVVPAIFGMLAYKAAA 340
           S S+ER IKGS +ALSS RLMIPA +YGLW LS+H FS    DFQ+VPA+FGM  YKAAA
Sbjct: 231 SESIERSIKGSGMALSSPRLMIPAAVYGLWVLSHHYFSNDIFDFQIVPAMFGMFVYKAAA 290

Query: 339 LVQVYRDNEDLEFVFPDSEET 277
           LVQVYRDNEDL+F+FP+  E+
Sbjct: 291 LVQVYRDNEDLQFLFPEDGES 311


>ref|XP_002312836.1| predicted protein [Populus trichocarpa] gi|222849244|gb|EEE86791.1|
           predicted protein [Populus trichocarpa]
          Length = 311

 Score =  196 bits (497), Expect = 5e-48
 Identities = 96/140 (68%), Positives = 115/140 (82%), Gaps = 1/140 (0%)
 Frame = -2

Query: 696 GFCLIVLSVQVTISYAVGVLLSCFYLQLLYQYVDNLSRESVPQVFMKKKSKKLGIRSEDL 517
           G+CL+VLSVQ  +SYA+GVL SC YLQLLYQ+ DNLS+E VP +F KKKSKK+GIRSEDL
Sbjct: 168 GYCLVVLSVQAAVSYAIGVLFSCLYLQLLYQHADNLSKEMVPPIFRKKKSKKIGIRSEDL 227

Query: 516 SNSLERLIKGSSIALSSQRLMIPAIIYGLWGLSN-HFSYKFLDFQVVPAIFGMLAYKAAA 340
            +S ER IKGS IALSS R++IPA IYGLW LS+ +F   F + Q+VPA+FGM  YKA+A
Sbjct: 228 RDSFERSIKGSGIALSSPRIVIPAAIYGLWVLSHQYFPNDFFEIQIVPAMFGMFVYKASA 287

Query: 339 LVQVYRDNEDLEFVFPDSEE 280
           LVQVYRDN+DL+ VFPDS E
Sbjct: 288 LVQVYRDNDDLKLVFPDSGE 307


>emb|CAN69049.1| hypothetical protein VITISV_001510 [Vitis vinifera]
          Length = 305

 Score =  194 bits (492), Expect = 2e-47
 Identities = 97/139 (69%), Positives = 113/139 (81%)
 Frame = -2

Query: 696 GFCLIVLSVQVTISYAVGVLLSCFYLQLLYQYVDNLSRESVPQVFMKKKSKKLGIRSEDL 517
           G+CLIVLS Q           SC YLQLLYQ+ DNLS+E+VPQ+FMKKKSKK+GIRS+DL
Sbjct: 173 GYCLIVLSAQC----------SCLYLQLLYQHADNLSKEAVPQIFMKKKSKKIGIRSQDL 222

Query: 516 SNSLERLIKGSSIALSSQRLMIPAIIYGLWGLSNHFSYKFLDFQVVPAIFGMLAYKAAAL 337
            + LE+ IKGS IALSS RL+IPA +YGLW LS HF+  F DFQ+VPA+FGM AYKAAAL
Sbjct: 223 EDLLEKTIKGSGIALSSPRLVIPAAJYGLWILSQHFAGDFFDFQLVPAMFGMFAYKAAAL 282

Query: 336 VQVYRDNEDLEFVFPDSEE 280
           VQVYRDNEDL+FVFPD+EE
Sbjct: 283 VQVYRDNEDLQFVFPDNEE 301


>ref|XP_003540808.1| PREDICTED: uncharacterized protein LOC100779930 [Glycine max]
          Length = 320

 Score =  193 bits (490), Expect = 3e-47
 Identities = 96/140 (68%), Positives = 112/140 (80%), Gaps = 1/140 (0%)
 Frame = -2

Query: 696 GFCLIVLSVQVTISYAVGVLLSCFYLQLLYQYVDNLSRESVPQVFMKKKSKKLGIRSEDL 517
           G+CL++LSVQV ISYA+GVL SC YLQLLYQ+ DNLS E VPQ+F KKKSKK+GIRSEDL
Sbjct: 177 GYCLVILSVQVAISYAIGVLFSCLYLQLLYQHADNLSSEDVPQIFKKKKSKKIGIRSEDL 236

Query: 516 SNSLERLIKGSSIALSSQRLMIPAIIYGLWGL-SNHFSYKFLDFQVVPAIFGMLAYKAAA 340
            + LER IKGS I+LSS RL+IPA IYGLW L   +F+    DFQ+VPA+FGM  YKAA 
Sbjct: 237 EDFLERTIKGSGISLSSPRLVIPATIYGLWILFHQYFTNDIFDFQLVPAMFGMFVYKAAV 296

Query: 339 LVQVYRDNEDLEFVFPDSEE 280
           LVQ YRDNE L  VFP++EE
Sbjct: 297 LVQAYRDNERLRLVFPENEE 316


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