BLASTX nr result

ID: Coptis24_contig00003779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003779
         (793 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003618179.1| Isocitrate dehydrogenase-like protein [Medic...   379   e-103
ref|XP_003581407.1| PREDICTED: isocitrate dehydrogenase [NADP], ...   379   e-103
gb|EEC77605.1| hypothetical protein OsI_16579 [Oryza sativa Indi...   376   e-102
emb|CAH67563.1| OSIGBa0101P20.6 [Oryza sativa Indica Group]           376   e-102
ref|NP_001053269.1| Os04g0508200 [Oryza sativa Japonica Group] g...   376   e-102

>ref|XP_003618179.1| Isocitrate dehydrogenase-like protein [Medicago truncatula]
           gi|355493194|gb|AES74397.1| Isocitrate
           dehydrogenase-like protein [Medicago truncatula]
          Length = 482

 Score =  379 bits (973), Expect = e-103
 Identities = 185/209 (88%), Positives = 195/209 (93%)
 Frame = -1

Query: 793 PLYLSTKNTILKKYDGRFKDIFQEVYEENWKQKFEENSIWYEHRLIDDMVAYALKSEGGY 614
           PLYLSTKNTILKKYDGRFKDIFQEVYEE W+QKFEE+SIWYEHRLIDDMVAYALKSEGGY
Sbjct: 274 PLYLSTKNTILKKYDGRFKDIFQEVYEERWRQKFEEHSIWYEHRLIDDMVAYALKSEGGY 333

Query: 613 VWACKNYDGDVQSDFLAQGFGSLGLMTSVLLSSDGKTLEAEAAHGTVTRHFRLDQKGQET 434
           VWACKNYDGDVQSD LAQGFGSLGLMTSVLLSSDGKTLEAEAAHGTVTRHFR  QKGQET
Sbjct: 334 VWACKNYDGDVQSDLLAQGFGSLGLMTSVLLSSDGKTLEAEAAHGTVTRHFRFHQKGQET 393

Query: 433 STNSIASIFAWTRGLEHRGKLDKHEQLLDFVSNLETACVETVETGKMTKDLALLMHGSKV 254
           STNSIASIFAWTRGLEHR KLDK+E+LLDF   LE ACVETVE+GKMTKDLALL+HG KV
Sbjct: 394 STNSIASIFAWTRGLEHRAKLDKNEKLLDFADKLEAACVETVESGKMTKDLALLIHGPKV 453

Query: 253 SRDLYLNTEEFIDAVAQNLETKLRVPSSL 167
           SR+ YLNTEEFIDAVA NLE KLR P+++
Sbjct: 454 SREFYLNTEEFIDAVASNLERKLREPATV 482


>ref|XP_003581407.1| PREDICTED: isocitrate dehydrogenase [NADP], chloroplastic-like
           [Brachypodium distachyon]
          Length = 481

 Score =  379 bits (972), Expect = e-103
 Identities = 182/209 (87%), Positives = 199/209 (95%)
 Frame = -1

Query: 793 PLYLSTKNTILKKYDGRFKDIFQEVYEENWKQKFEENSIWYEHRLIDDMVAYALKSEGGY 614
           PLYLSTKNTILKKYDGRFKDIFQEVYEENWK+KFEENSIWYEHRLIDDMVAYA+KSEGGY
Sbjct: 273 PLYLSTKNTILKKYDGRFKDIFQEVYEENWKEKFEENSIWYEHRLIDDMVAYAVKSEGGY 332

Query: 613 VWACKNYDGDVQSDFLAQGFGSLGLMTSVLLSSDGKTLEAEAAHGTVTRHFRLDQKGQET 434
           VWACKNYDGDVQSDFLAQGFGSLGLM+SVLLSSDGKTLEAEAAHGTVTRHFRL QKGQET
Sbjct: 333 VWACKNYDGDVQSDFLAQGFGSLGLMSSVLLSSDGKTLEAEAAHGTVTRHFRLHQKGQET 392

Query: 433 STNSIASIFAWTRGLEHRGKLDKHEQLLDFVSNLETACVETVETGKMTKDLALLMHGSKV 254
           STNSIASIFAWTRGLEHR KLDK+++LLDF   LE+ACVETVE+GKMTKDLALL HG KV
Sbjct: 393 STNSIASIFAWTRGLEHRAKLDKNDRLLDFTQKLESACVETVESGKMTKDLALLSHGPKV 452

Query: 253 SRDLYLNTEEFIDAVAQNLETKLRVPSSL 167
           +R+ YL+TEEFIDAVAQ L+ K+++P++L
Sbjct: 453 TREFYLSTEEFIDAVAQQLQEKIKLPAAL 481


>gb|EEC77605.1| hypothetical protein OsI_16579 [Oryza sativa Indica Group]
          Length = 468

 Score =  376 bits (966), Expect = e-102
 Identities = 180/207 (86%), Positives = 196/207 (94%)
 Frame = -1

Query: 793 PLYLSTKNTILKKYDGRFKDIFQEVYEENWKQKFEENSIWYEHRLIDDMVAYALKSEGGY 614
           PLYLSTKNTILKKYDGRFKDIFQEVYEE WK+KFEENSIWYEHRLIDDMVAYA+KSEGGY
Sbjct: 260 PLYLSTKNTILKKYDGRFKDIFQEVYEEKWKEKFEENSIWYEHRLIDDMVAYAVKSEGGY 319

Query: 613 VWACKNYDGDVQSDFLAQGFGSLGLMTSVLLSSDGKTLEAEAAHGTVTRHFRLDQKGQET 434
           VWACKNYDGDVQSDFLAQGFGSLGLM+SVLLSSDGKTLEAEAAHGTVTRHFRL QKGQET
Sbjct: 320 VWACKNYDGDVQSDFLAQGFGSLGLMSSVLLSSDGKTLEAEAAHGTVTRHFRLHQKGQET 379

Query: 433 STNSIASIFAWTRGLEHRGKLDKHEQLLDFVSNLETACVETVETGKMTKDLALLMHGSKV 254
           STNSIASIFAWTRGLEHR KLDK+++LLDF   LE+AC+ETVE+GKMTKDLALL+HG KV
Sbjct: 380 STNSIASIFAWTRGLEHRAKLDKNDRLLDFTKKLESACIETVESGKMTKDLALLIHGPKV 439

Query: 253 SRDLYLNTEEFIDAVAQNLETKLRVPS 173
           +R+ YLNTEEFIDAVAQ L  K+++P+
Sbjct: 440 TREFYLNTEEFIDAVAQQLREKIQIPA 466


>emb|CAH67563.1| OSIGBa0101P20.6 [Oryza sativa Indica Group]
          Length = 468

 Score =  376 bits (966), Expect = e-102
 Identities = 180/207 (86%), Positives = 196/207 (94%)
 Frame = -1

Query: 793 PLYLSTKNTILKKYDGRFKDIFQEVYEENWKQKFEENSIWYEHRLIDDMVAYALKSEGGY 614
           PLYLSTKNTILKKYDGRFKDIFQEVYEE WK+KFEENSIWYEHRLIDDMVAYA+KSEGGY
Sbjct: 260 PLYLSTKNTILKKYDGRFKDIFQEVYEEKWKEKFEENSIWYEHRLIDDMVAYAVKSEGGY 319

Query: 613 VWACKNYDGDVQSDFLAQGFGSLGLMTSVLLSSDGKTLEAEAAHGTVTRHFRLDQKGQET 434
           VWACKNYDGDVQSDFLAQGFGSLGLM+SVLLSSDGKTLEAEAAHGTVTRHFRL QKGQET
Sbjct: 320 VWACKNYDGDVQSDFLAQGFGSLGLMSSVLLSSDGKTLEAEAAHGTVTRHFRLHQKGQET 379

Query: 433 STNSIASIFAWTRGLEHRGKLDKHEQLLDFVSNLETACVETVETGKMTKDLALLMHGSKV 254
           STNSIASIFAWTRGLEHR KLDK+++LLDF   LE+AC+ETVE+GKMTKDLALL+HG KV
Sbjct: 380 STNSIASIFAWTRGLEHRAKLDKNDRLLDFTKKLESACIETVESGKMTKDLALLIHGPKV 439

Query: 253 SRDLYLNTEEFIDAVAQNLETKLRVPS 173
           +R+ YLNTEEFIDAVAQ L  K+++P+
Sbjct: 440 TREFYLNTEEFIDAVAQQLREKIQIPA 466


>ref|NP_001053269.1| Os04g0508200 [Oryza sativa Japonica Group]
           gi|113564840|dbj|BAF15183.1| Os04g0508200 [Oryza sativa
           Japonica Group] gi|215697745|dbj|BAG91739.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 478

 Score =  376 bits (966), Expect = e-102
 Identities = 180/207 (86%), Positives = 196/207 (94%)
 Frame = -1

Query: 793 PLYLSTKNTILKKYDGRFKDIFQEVYEENWKQKFEENSIWYEHRLIDDMVAYALKSEGGY 614
           PLYLSTKNTILKKYDGRFKDIFQEVYEE WK+KFEENSIWYEHRLIDDMVAYA+KSEGGY
Sbjct: 270 PLYLSTKNTILKKYDGRFKDIFQEVYEEKWKEKFEENSIWYEHRLIDDMVAYAVKSEGGY 329

Query: 613 VWACKNYDGDVQSDFLAQGFGSLGLMTSVLLSSDGKTLEAEAAHGTVTRHFRLDQKGQET 434
           VWACKNYDGDVQSDFLAQGFGSLGLM+SVLLSSDGKTLEAEAAHGTVTRHFRL QKGQET
Sbjct: 330 VWACKNYDGDVQSDFLAQGFGSLGLMSSVLLSSDGKTLEAEAAHGTVTRHFRLHQKGQET 389

Query: 433 STNSIASIFAWTRGLEHRGKLDKHEQLLDFVSNLETACVETVETGKMTKDLALLMHGSKV 254
           STNSIASIFAWTRGLEHR KLDK+++LLDF   LE+AC+ETVE+GKMTKDLALL+HG KV
Sbjct: 390 STNSIASIFAWTRGLEHRAKLDKNDRLLDFTKKLESACIETVESGKMTKDLALLIHGPKV 449

Query: 253 SRDLYLNTEEFIDAVAQNLETKLRVPS 173
           +R+ YLNTEEFIDAVAQ L  K+++P+
Sbjct: 450 TREFYLNTEEFIDAVAQQLREKIQIPA 476


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