BLASTX nr result

ID: Coptis24_contig00003762 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003762
         (746 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311158.1| predicted protein [Populus trichocarpa] gi|1...   107   3e-21
ref|XP_003606613.1| Mitochondrial ATP synthase subunit [Medicago...   105   1e-20
ref|XP_003539701.1| PREDICTED: uncharacterized protein LOC100306...   104   2e-20
ref|XP_002316297.1| predicted protein [Populus trichocarpa] gi|1...   104   2e-20
ref|XP_004142079.1| PREDICTED: uncharacterized protein LOC101216...   103   3e-20

>ref|XP_002311158.1| predicted protein [Populus trichocarpa] gi|118488031|gb|ABK95836.1|
           unknown [Populus trichocarpa]
           gi|222850978|gb|EEE88525.1| predicted protein [Populus
           trichocarpa]
          Length = 56

 Score =  107 bits (267), Expect = 3e-21
 Identities = 46/55 (83%), Positives = 51/55 (92%)
 Frame = -3

Query: 591 MRKFDPWPVFFKREWKRTWPFLVGFAVTGAVITKMTLNLTEEDKKNSPFVQRHKR 427
           MRKFDPWPVFFKREW R WPFLVGFA+TGA+ITK +L+LTEED KNSPFVQRHK+
Sbjct: 1   MRKFDPWPVFFKREWNRNWPFLVGFAITGALITKFSLSLTEEDAKNSPFVQRHKK 55


>ref|XP_003606613.1| Mitochondrial ATP synthase subunit [Medicago truncatula]
           gi|355507668|gb|AES88810.1| Mitochondrial ATP synthase
           subunit [Medicago truncatula]
           gi|388518417|gb|AFK47270.1| unknown [Medicago
           truncatula]
          Length = 55

 Score =  105 bits (262), Expect = 1e-20
 Identities = 46/55 (83%), Positives = 50/55 (90%)
 Frame = -3

Query: 591 MRKFDPWPVFFKREWKRTWPFLVGFAVTGAVITKMTLNLTEEDKKNSPFVQRHKR 427
           MR+FDPWPVFFKREWKRTWPFLVGFAVTGA++TK +L LTEED KNS FVQ HKR
Sbjct: 1   MRQFDPWPVFFKREWKRTWPFLVGFAVTGALVTKFSLGLTEEDAKNSKFVQHHKR 55


>ref|XP_003539701.1| PREDICTED: uncharacterized protein LOC100306502 [Glycine max]
          Length = 55

 Score =  104 bits (259), Expect = 2e-20
 Identities = 46/55 (83%), Positives = 50/55 (90%)
 Frame = -3

Query: 591 MRKFDPWPVFFKREWKRTWPFLVGFAVTGAVITKMTLNLTEEDKKNSPFVQRHKR 427
           MRKFDPWPVFFKREWKR WPFLVGFAVTGA+ITK++L LTEED KNS FV+ HKR
Sbjct: 1   MRKFDPWPVFFKREWKRNWPFLVGFAVTGALITKLSLGLTEEDAKNSKFVKAHKR 55


>ref|XP_002316297.1| predicted protein [Populus trichocarpa] gi|118483973|gb|ABK93874.1|
           unknown [Populus trichocarpa]
           gi|118485005|gb|ABK94367.1| unknown [Populus
           trichocarpa] gi|222865337|gb|EEF02468.1| predicted
           protein [Populus trichocarpa]
          Length = 56

 Score =  104 bits (259), Expect = 2e-20
 Identities = 44/55 (80%), Positives = 49/55 (89%)
 Frame = -3

Query: 591 MRKFDPWPVFFKREWKRTWPFLVGFAVTGAVITKMTLNLTEEDKKNSPFVQRHKR 427
           MRKFDPWPVFF+REW R WPFL GFA+TG +ITK +L+LTEED KNSPFVQRHKR
Sbjct: 1   MRKFDPWPVFFRREWNRNWPFLAGFAITGTLITKFSLSLTEEDAKNSPFVQRHKR 55


>ref|XP_004142079.1| PREDICTED: uncharacterized protein LOC101216317 [Cucumis sativus]
           gi|449522560|ref|XP_004168294.1| PREDICTED:
           uncharacterized protein LOC101229099 [Cucumis sativus]
          Length = 55

 Score =  103 bits (258), Expect = 3e-20
 Identities = 44/55 (80%), Positives = 49/55 (89%)
 Frame = -3

Query: 591 MRKFDPWPVFFKREWKRTWPFLVGFAVTGAVITKMTLNLTEEDKKNSPFVQRHKR 427
           MRKFDPWPVFF+REWKR WPFLVGFA+TG++ITKMT   TEE+ KNSPFVQRH R
Sbjct: 1   MRKFDPWPVFFRREWKRNWPFLVGFAITGSLITKMTAGFTEEEVKNSPFVQRHNR 55


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