BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003760
         (1569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vit...   697   0.0  
ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus co...   689   0.0  
ref|XP_002328516.1| predicted protein [Populus trichocarpa] gi|2...   680   0.0  
ref|XP_003556487.1| PREDICTED: 5'-3' exoribonuclease 4-like [Gly...   677   0.0  
ref|NP_001233774.1| ethylene insensitive 5/7 [Solanum lycopersic...   673   0.0  

>ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera]
          Length = 950

 Score =  697 bits (1798), Expect = 0.0
 Identities = 346/503 (68%), Positives = 385/503 (76%)
 Frame = +3

Query: 60   MGVPAFYRWLAERYPRSITDVIEEEEEILDGVLSVIDVSNPNPNNVEFDHFYLDMNGIIH 239
            MGVPAFYRWLA+RYP ++ DV+EEE    +G    IDVS PNPN +EFD+ YLDMNGIIH
Sbjct: 1    MGVPAFYRWLADRYPLAVMDVVEEEPS--EGGAE-IDVSRPNPNGMEFDNLYLDMNGIIH 57

Query: 240  PCFHPEGKPAPATYDDVFKSIFDYIDHLFSLVRPRKLLFMAIDGVAPRAKMNQQRIXXXX 419
            PCFHP+GKPAP TYDDVFKSIFDYIDHLFSLVRPR+LL+MAIDGVAPRAKMNQQR     
Sbjct: 58   PCFHPDGKPAPTTYDDVFKSIFDYIDHLFSLVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 117

Query: 420  XXXXXXXXXXXXXXXXXXXXXXGKSLTRKEKPETSDSNVITPGTQFMAVLSVALQYYVHS 599
                                  GK L+ KEKPETSDSNVITPGT+FMAVLSVALQYY+HS
Sbjct: 118  AAKDAAEAEAEEERLRKEFEVEGKMLSPKEKPETSDSNVITPGTKFMAVLSVALQYYIHS 177

Query: 600  RLNRIPGWKGIKVILSDSNVPGEGEHKIMSYMRLQRDLPGFNPNTRHCLYGLDADLIMLA 779
            RLNR PGW   KVILSDSNVPGEGEHKIMSY+R QR+L GFNPNTRHCLYGLDADLIML+
Sbjct: 178  RLNRNPGWCSTKVILSDSNVPGEGEHKIMSYIRSQRNLLGFNPNTRHCLYGLDADLIMLS 237

Query: 780  LATHEVHFSILREVIPLPWQLGKCFTCGLVGHLAAECHKKXXXXXXXXXXXXXXXXPIHK 959
            LATHEVHFSILRE+I  P Q  KC+ CG VGHLAAEC                   PIHK
Sbjct: 238  LATHEVHFSILREMITPPGQQEKCYLCGQVGHLAAECR----------GIEVVDDTPIHK 287

Query: 960  KNYQFINIFVLREYLYYDLEISNPPFEINFERXXXXXXXXXXXXGNDFLPHMPTLEIREG 1139
            K YQF+NI+VLREYL YDLEI NPPFEINFER            GNDFLPHMPTLEIREG
Sbjct: 288  KKYQFLNIWVLREYLQYDLEILNPPFEINFERLLDDFVFLCFFVGNDFLPHMPTLEIREG 347

Query: 1140 AITLLMHVYKCEFAAMGGYLTDAGEVLLGRVEHFVQAAAVFEDQIFQKRSRIEQAQASND 1319
            AI LLMHVY+ EF+AMGGYLTDAGEVLL RVEHF+++ AV+EDQIFQKR+RI+QA  +N+
Sbjct: 348  AINLLMHVYRREFSAMGGYLTDAGEVLLDRVEHFIESVAVYEDQIFQKRTRIQQALENNE 407

Query: 1320 NVAMKLINENSEEPQIQLQDKVKLGEPGYKERYYVEKFGVSNLEEIXXXXXXXXXXYVEG 1499
             + ++   E SEEP+  ++DKVKLGEPGYKERYY EKF +SN EEI          YVEG
Sbjct: 408  EMKLRTKREASEEPRAPVEDKVKLGEPGYKERYYTEKFNLSNPEEIDKVRKEIVMKYVEG 467

Query: 1500 LCWVMRYYYQGVCSWQWFYPYHY 1568
            LCWV RYYYQGVCSWQW+YP+HY
Sbjct: 468  LCWVCRYYYQGVCSWQWYYPFHY 490


>ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus communis]
            gi|223548213|gb|EEF49704.1| 5'->3' exoribonuclease,
            putative [Ricinus communis]
          Length = 964

 Score =  689 bits (1779), Expect = 0.0
 Identities = 338/504 (67%), Positives = 381/504 (75%), Gaps = 1/504 (0%)
 Frame = +3

Query: 60   MGVPAFYRWLAERYPRSITDVIEEE-EEILDGVLSVIDVSNPNPNNVEFDHFYLDMNGII 236
            MGVPAFYRWLA+RYP +I DV+EEE +E  +GV+  ID+S PNPN +EFD+ YLDMNGII
Sbjct: 1    MGVPAFYRWLADRYPLAIVDVVEEEPKEDSNGVIGPIDISKPNPNGLEFDNLYLDMNGII 60

Query: 237  HPCFHPEGKPAPATYDDVFKSIFDYIDHLFSLVRPRKLLFMAIDGVAPRAKMNQQRIXXX 416
            HPCFHP+GKP P TYDDVFKSIFDYIDHLF+LVRPRKLLFMAIDGVAPRAKMNQQR    
Sbjct: 61   HPCFHPDGKPPPPTYDDVFKSIFDYIDHLFTLVRPRKLLFMAIDGVAPRAKMNQQRSRRF 120

Query: 417  XXXXXXXXXXXXXXXXXXXXXXXGKSLTRKEKPETSDSNVITPGTQFMAVLSVALQYYVH 596
                                   GK L+ KEKPETSDSNVITPGTQFMAVLS  LQYYV 
Sbjct: 121  RAAKDAAEAEAEEERLRKEFEAEGKLLSPKEKPETSDSNVITPGTQFMAVLSTGLQYYVQ 180

Query: 597  SRLNRIPGWKGIKVILSDSNVPGEGEHKIMSYMRLQRDLPGFNPNTRHCLYGLDADLIML 776
             RLN  PGWK  KVILSD+NVPGEGEHK+MSY+RLQR+L GFNPNTRHCLYGLDADLIML
Sbjct: 181  MRLNHNPGWKYTKVILSDANVPGEGEHKVMSYIRLQRNLSGFNPNTRHCLYGLDADLIML 240

Query: 777  ALATHEVHFSILREVIPLPWQLGKCFTCGLVGHLAAECHKKXXXXXXXXXXXXXXXXPIH 956
            ALATHE+HFSILRE++  P Q  KCF+CG  GHLAA+C  K                PIH
Sbjct: 241  ALATHEIHFSILREMVTFPGQQEKCFSCGQTGHLAADCRGKPGDNPLDWNVEDDV--PIH 298

Query: 957  KKNYQFINIFVLREYLYYDLEISNPPFEINFERXXXXXXXXXXXXGNDFLPHMPTLEIRE 1136
            KK YQF+NI+VLREYL Y+L++ NPP EINFER            GNDFLPHMPTLEIRE
Sbjct: 299  KKKYQFLNIWVLREYLQYELDVPNPPLEINFERILDDFVFLCFFVGNDFLPHMPTLEIRE 358

Query: 1137 GAITLLMHVYKCEFAAMGGYLTDAGEVLLGRVEHFVQAAAVFEDQIFQKRSRIEQAQASN 1316
            GAI LLMHVY+ EF+AMGGYLTDAGEV L RVEHF+Q+ A++E+QIFQKR+RI+Q   +N
Sbjct: 359  GAINLLMHVYRREFSAMGGYLTDAGEVNLDRVEHFIQSVAIYEEQIFQKRTRIQQFLENN 418

Query: 1317 DNVAMKLINENSEEPQIQLQDKVKLGEPGYKERYYVEKFGVSNLEEIXXXXXXXXXXYVE 1496
            + + +K   E+SEE Q    DKVKLGEPGYKERYY EKFG++  +EI          YVE
Sbjct: 419  EEMRLKARRESSEEIQTPAVDKVKLGEPGYKERYYAEKFGLTTPDEIDKVRNDVVLKYVE 478

Query: 1497 GLCWVMRYYYQGVCSWQWFYPYHY 1568
            GLCWV RYYYQGVCSWQWFYPYHY
Sbjct: 479  GLCWVCRYYYQGVCSWQWFYPYHY 502


>ref|XP_002328516.1| predicted protein [Populus trichocarpa] gi|222838231|gb|EEE76596.1|
            predicted protein [Populus trichocarpa]
          Length = 948

 Score =  680 bits (1755), Expect = 0.0
 Identities = 340/504 (67%), Positives = 378/504 (75%), Gaps = 1/504 (0%)
 Frame = +3

Query: 60   MGVPAFYRWLAERYPRSITDVIEEE-EEILDGVLSVIDVSNPNPNNVEFDHFYLDMNGII 236
            MGVPAFYRWLA+RYP SI DVIEEE +E  +G    IDVS PNPN +E+D+ YLDMNGII
Sbjct: 1    MGVPAFYRWLADRYPLSIVDVIEEEPQEDSNGNSKPIDVSKPNPNGIEYDNLYLDMNGII 60

Query: 237  HPCFHPEGKPAPATYDDVFKSIFDYIDHLFSLVRPRKLLFMAIDGVAPRAKMNQQRIXXX 416
            HPCFHPEGKPAPATYDDVFKSIF YIDHLF+LVRPRKLLFMAIDGVAPRAKMNQQR    
Sbjct: 61   HPCFHPEGKPAPATYDDVFKSIFVYIDHLFALVRPRKLLFMAIDGVAPRAKMNQQRSRRF 120

Query: 417  XXXXXXXXXXXXXXXXXXXXXXXGKSLTRKEKPETSDSNVITPGTQFMAVLSVALQYYVH 596
                                   G  L+ KEKPET DSNVITPGTQFMAVLS+ALQYY+ 
Sbjct: 121  RAAKDAAQAEAEEERLRKEFEAEGVLLSVKEKPETRDSNVITPGTQFMAVLSIALQYYIQ 180

Query: 597  SRLNRIPGWKGIKVILSDSNVPGEGEHKIMSYMRLQRDLPGFNPNTRHCLYGLDADLIML 776
            SRLN  PGW+  KVILSD+NVPGEGEHKIMSY+RLQR++PGFN NTRHCLYGLDADLIML
Sbjct: 181  SRLNHNPGWQNTKVILSDANVPGEGEHKIMSYIRLQRNIPGFNSNTRHCLYGLDADLIML 240

Query: 777  ALATHEVHFSILREVIPLPWQLGKCFTCGLVGHLAAECHKKXXXXXXXXXXXXXXXXPIH 956
            +LATHEVHFSILRE++  P Q  KCF CG  GHLAAEC  K                PIH
Sbjct: 241  SLATHEVHFSILREMVIFPGQQDKCFLCGQAGHLAAECRGKQGDDALDWNVVDDT--PIH 298

Query: 957  KKNYQFINIFVLREYLYYDLEISNPPFEINFERXXXXXXXXXXXXGNDFLPHMPTLEIRE 1136
            KK YQF+NI+VLREYL YDL+I NPPF I+FE+            GNDFLPHMPTLEIRE
Sbjct: 299  KKKYQFLNIWVLREYLQYDLDIPNPPFAIDFEKIVDDFVFMCFFVGNDFLPHMPTLEIRE 358

Query: 1137 GAITLLMHVYKCEFAAMGGYLTDAGEVLLGRVEHFVQAAAVFEDQIFQKRSRIEQAQASN 1316
            GAI LLMH+Y+ EF+AMGGYLT AGEV L +VEHF+Q+ AV+E+QIFQKR+RI+QA  +N
Sbjct: 359  GAINLLMHIYRREFSAMGGYLTLAGEVFLDKVEHFIQSVAVYEEQIFQKRARIQQAFENN 418

Query: 1317 DNVAMKLINENSEEPQIQLQDKVKLGEPGYKERYYVEKFGVSNLEEIXXXXXXXXXXYVE 1496
            + +  K   + SEE Q    DKVKLGEPGYKERYY EKF +SN EEI          YVE
Sbjct: 419  EEMKHKARRDLSEEIQAPPVDKVKLGEPGYKERYYAEKFDLSNEEEIDKVTKDVVLKYVE 478

Query: 1497 GLCWVMRYYYQGVCSWQWFYPYHY 1568
            GLCWV RYYYQGVCSWQWFYPYHY
Sbjct: 479  GLCWVCRYYYQGVCSWQWFYPYHY 502


>ref|XP_003556487.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
          Length = 931

 Score =  677 bits (1748), Expect = 0.0
 Identities = 332/504 (65%), Positives = 374/504 (74%), Gaps = 1/504 (0%)
 Frame = +3

Query: 60   MGVPAFYRWLAERYPRSITDVIEEEEEILD-GVLSVIDVSNPNPNNVEFDHFYLDMNGII 236
            MGVPAFYRWLA+RYP SI DV+EE+  + D GV   ID S PNPN +EFD+ YLDMNGII
Sbjct: 1    MGVPAFYRWLADRYPLSIADVVEEDPAVGDDGVPFPIDASKPNPNGMEFDNLYLDMNGII 60

Query: 237  HPCFHPEGKPAPATYDDVFKSIFDYIDHLFSLVRPRKLLFMAIDGVAPRAKMNQQRIXXX 416
            HPCFHP+GKPAPATYDDVFKSIFDY+DHL++LVRPRKLL++AIDGVAPRAKMNQQR    
Sbjct: 61   HPCFHPDGKPAPATYDDVFKSIFDYLDHLYTLVRPRKLLYLAIDGVAPRAKMNQQRSRRF 120

Query: 417  XXXXXXXXXXXXXXXXXXXXXXXGKSLTRKEKPETSDSNVITPGTQFMAVLSVALQYYVH 596
                                   GK L+ K+KPETSDSNVITPGTQFM  LSV+LQYY+ 
Sbjct: 121  RAAKDAAEAEAEEERLRKEFQSEGKVLSSKDKPETSDSNVITPGTQFMVALSVSLQYYIQ 180

Query: 597  SRLNRIPGWKGIKVILSDSNVPGEGEHKIMSYMRLQRDLPGFNPNTRHCLYGLDADLIML 776
            +RLN  P W+  KVILSDSN PGEGEHKIM Y+RLQR+LPGFNPNTRHCLYGLDADLIML
Sbjct: 181  TRLNHNPSWRNTKVILSDSNAPGEGEHKIMEYIRLQRNLPGFNPNTRHCLYGLDADLIML 240

Query: 777  ALATHEVHFSILREVIPLPWQLGKCFTCGLVGHLAAECHKKXXXXXXXXXXXXXXXXPIH 956
            +LATHEVHFSILREV+ LP Q  KCF CG  GH AA+C  +                PIH
Sbjct: 241  SLATHEVHFSILREVVTLPGQQDKCFLCGQAGHFAADCQAEDFDTPDDS--------PIH 292

Query: 957  KKNYQFINIFVLREYLYYDLEISNPPFEINFERXXXXXXXXXXXXGNDFLPHMPTLEIRE 1136
            KK YQF+NI+VLREYL ++LEI NPPFEI+FER            GNDFLPHMPTLEIRE
Sbjct: 293  KKKYQFLNIWVLREYLQFELEIPNPPFEIDFERVVDDFVFLCFFVGNDFLPHMPTLEIRE 352

Query: 1137 GAITLLMHVYKCEFAAMGGYLTDAGEVLLGRVEHFVQAAAVFEDQIFQKRSRIEQAQASN 1316
            GAI LLMH+Y+ EF A+GGYLTDAGEV L RV+ F+Q   V EDQIFQKR RI+ A  +N
Sbjct: 353  GAINLLMHIYRKEFTAIGGYLTDAGEVFLDRVQRFIQFVTVHEDQIFQKRVRIQLAAENN 412

Query: 1317 DNVAMKLINENSEEPQIQLQDKVKLGEPGYKERYYVEKFGVSNLEEIXXXXXXXXXXYVE 1496
            + +  +   E   EP+  L DKVKLGEPGYKERYYVEKFGVSNLEEI          YVE
Sbjct: 413  EEMRARARGEMPGEPRASLLDKVKLGEPGYKERYYVEKFGVSNLEEIDKIKKDIVLKYVE 472

Query: 1497 GLCWVMRYYYQGVCSWQWFYPYHY 1568
            GLCWV RYYYQGVCSW+W+YPYHY
Sbjct: 473  GLCWVCRYYYQGVCSWKWYYPYHY 496


>ref|NP_001233774.1| ethylene insensitive 5/7 [Solanum lycopersicum]
            gi|312063753|gb|ADQ27233.1| 5'-3' exoribonuclease 4
            [Solanum lycopersicum]
          Length = 978

 Score =  673 bits (1737), Expect = 0.0
 Identities = 336/503 (66%), Positives = 375/503 (74%)
 Frame = +3

Query: 60   MGVPAFYRWLAERYPRSITDVIEEEEEILDGVLSVIDVSNPNPNNVEFDHFYLDMNGIIH 239
            MGVPAFYRWLA+RYP SI D++EEE +  D V   +D+S PNPN +EFD+ YLDMNGIIH
Sbjct: 1    MGVPAFYRWLADRYPLSIVDMVEEEPK--DDV--PVDISKPNPNGMEFDNLYLDMNGIIH 56

Query: 240  PCFHPEGKPAPATYDDVFKSIFDYIDHLFSLVRPRKLLFMAIDGVAPRAKMNQQRIXXXX 419
            PCFHPEGKPAPATY+DVF SIFDYIDHLFSLVRPRKLL+MAIDGVAPRAKMNQQR     
Sbjct: 57   PCFHPEGKPAPATYNDVFNSIFDYIDHLFSLVRPRKLLYMAIDGVAPRAKMNQQRTRRFR 116

Query: 420  XXXXXXXXXXXXXXXXXXXXXXGKSLTRKEKPETSDSNVITPGTQFMAVLSVALQYYVHS 599
                                     L   EKPETSDSNVITPGT FMAVLS+ALQYY+HS
Sbjct: 117  ASKDAAESEAEEKRLREEFEMEAAILVPTEKPETSDSNVITPGTPFMAVLSIALQYYIHS 176

Query: 600  RLNRIPGWKGIKVILSDSNVPGEGEHKIMSYMRLQRDLPGFNPNTRHCLYGLDADLIMLA 779
            RLN+  GW+  KVILSD+NVPGEGEHKIMSY+RLQR++PGFNPNTRHCLYGLDADLIML+
Sbjct: 177  RLNKNAGWRFTKVILSDANVPGEGEHKIMSYIRLQRNIPGFNPNTRHCLYGLDADLIMLS 236

Query: 780  LATHEVHFSILREVIPLPWQLGKCFTCGLVGHLAAECHKKXXXXXXXXXXXXXXXXPIHK 959
            LATHEVHFSILREVI  P Q  KCF CG VGHLAA CH                  PIHK
Sbjct: 237  LATHEVHFSILREVITPPGQQEKCFACGQVGHLAASCH--GTNGNHGKDGKAVNDTPIHK 294

Query: 960  KNYQFINIFVLREYLYYDLEISNPPFEINFERXXXXXXXXXXXXGNDFLPHMPTLEIREG 1139
            K YQF++I+VLREYL YDLEI NPPF+I+FER            GNDFLPHMPTLEIREG
Sbjct: 295  KKYQFLHIWVLREYLQYDLEIYNPPFQIDFERVVDDFVFLCFFVGNDFLPHMPTLEIREG 354

Query: 1140 AITLLMHVYKCEFAAMGGYLTDAGEVLLGRVEHFVQAAAVFEDQIFQKRSRIEQAQASND 1319
            AI LLM +Y+ +F  MGGYLTDAGEV L RVEHF+QAAAV+EDQIFQKR+RI+Q+  +N+
Sbjct: 355  AINLLMSIYRRDFTTMGGYLTDAGEVFLDRVEHFIQAAAVYEDQIFQKRARIQQSIENNE 414

Query: 1320 NVAMKLINENSEEPQIQLQDKVKLGEPGYKERYYVEKFGVSNLEEIXXXXXXXXXXYVEG 1499
             V      E + +P    +DKVKLGEPGYKERYY EKFGVS  E+I          Y+EG
Sbjct: 415  RVR----KEANAQPHPPAEDKVKLGEPGYKERYYSEKFGVSTAEDIHEVRQDVVQKYMEG 470

Query: 1500 LCWVMRYYYQGVCSWQWFYPYHY 1568
            LCWV RYYYQGVCSWQWFYPYHY
Sbjct: 471  LCWVCRYYYQGVCSWQWFYPYHY 493