BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003737
         (617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148391.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...    96   7e-18
ref|XP_002283782.2| PREDICTED: E3 ubiquitin-protein ligase HERC2...    96   7e-18
ref|XP_003545609.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...    94   3e-17
ref|XP_003569713.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...    93   3e-17
dbj|BAJ94465.1| predicted protein [Hordeum vulgare subsp. vulgar...    93   4e-17

>ref|XP_004148391.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
          Length = 571

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 50/110 (45%), Positives = 72/110 (65%), Gaps = 2/110 (1%)
 Frame = +1

Query: 292 TLTDAGDALSAMYIPCNEYGS-KFLNPLQVVCGAAHTIIVAHSGYGLWASGTGRSGGLGS 468
           T T+ GDA+S + I C+   S KFL+P+QV CGAAHT+IVAH GY LW+ G GRSG LG+
Sbjct: 358 TGTNTGDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDGYKLWSWGRGRSGVLGN 417

Query: 469 DNPANSYAPCTVLWLTVDEDF-QDALEFASQETRIQDEEP*RLAEIDKKL 615
               + + P  VLW  ++EDF Q+  E   +E ++++ +   + E +KKL
Sbjct: 418 GKAVDCFTPTVVLWPPLNEDFDQEETETKCEEDKVEENKIEEVTEENKKL 467


>ref|XP_002283782.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Vitis vinifera]
          Length = 564

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 52/110 (47%), Positives = 73/110 (66%), Gaps = 2/110 (1%)
 Frame = +1

Query: 292 TLTDAGDALSAMYIPCNEYGSKFLNPLQVVCGAAHTIIVAHSGYGLWASGTGRSGGLGSD 471
           T TD GDA S +      YGSKF +P+QV CGAAHT++VA  GY LW+ G GRSG LG+ 
Sbjct: 357 TGTDPGDAPSPLL-----YGSKFRDPVQVACGAAHTVLVADDGYKLWSWGRGRSGVLGNG 411

Query: 472 NPANSYAPCTVLWLTVDEDFQDALE--FASQETRIQDEEP*RLAEIDKKL 615
              + +AP TVLW  + EDF++ LE    S E +I++++P  + E++K+L
Sbjct: 412 KTVDCFAPSTVLWPPLTEDFKE-LESGTTSGEKKIENKDPEEVTEMEKRL 460


>ref|XP_003545609.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max]
          Length = 576

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 49/106 (46%), Positives = 64/106 (60%)
 Frame = +1

Query: 298 TDAGDALSAMYIPCNEYGSKFLNPLQVVCGAAHTIIVAHSGYGLWASGTGRSGGLGSDNP 477
           T +GDALS   I CN +  KF  P+QV CGAAHT+I+AH G  LW+ G GRSG LG+   
Sbjct: 368 THSGDALSPFLISCNPHQPKFSQPVQVACGAAHTVIIAHEGCKLWSWGRGRSGVLGNGKT 427

Query: 478 ANSYAPCTVLWLTVDEDFQDALEFASQETRIQDEEP*RLAEIDKKL 615
            +SY P  VLW  + EDF+    ++S E      E   + EID++L
Sbjct: 428 MDSYTPTIVLWPPLMEDFKQEELYSSCEH--DKNETKEVTEIDERL 471


>ref|XP_003569713.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 564

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 46/87 (52%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
 Frame = +1

Query: 301 DAGDALSAMYIPCNEY-GSKFLNPLQVVCGAAHTIIVAHSGYGLWASGTGRSGGLGSDNP 477
           DAGDAL  + +   E  G KFL P+QV CGAAHT++VA  GY +WA G GRSG LG D  
Sbjct: 350 DAGDALYPIRVQSPETNGFKFLGPVQVTCGAAHTVLVAGDGYRMWAWGRGRSGVLGRDQT 409

Query: 478 ANSYAPCTVLWLTVDEDFQDALEFASQ 558
            +SY PC V+W  +DE+FQ+  E   Q
Sbjct: 410 TDSYTPCVVMWPPLDENFQEIHENQGQ 436


>dbj|BAJ94465.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326532960|dbj|BAJ89325.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 566

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 44/80 (55%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
 Frame = +1

Query: 301 DAGDALSAMYIPCNEY-GSKFLNPLQVVCGAAHTIIVAHSGYGLWASGTGRSGGLGSDNP 477
           DAGDAL  + +   E  G KFL P+QV CGAAHT++VA  GY +WA G GRSG LG D  
Sbjct: 352 DAGDALHPIRVQSPETNGFKFLGPVQVACGAAHTVLVAGDGYRMWAWGRGRSGVLGRDQT 411

Query: 478 ANSYAPCTVLWLTVDEDFQD 537
            +SY PC V+W  +DE+FQ+
Sbjct: 412 TDSYTPCVVMWPPLDENFQE 431