BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003707
         (999 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264869.2| PREDICTED: 50S ribosomal protein L19, chloro...   200   4e-49
emb|CAN82787.1| hypothetical protein VITISV_037813 [Vitis vinifera]   197   3e-48
ref|XP_004147231.1| PREDICTED: 50S ribosomal protein L19, chloro...   187   4e-45
ref|NP_001236421.1| uncharacterized protein LOC100500328 [Glycin...   185   1e-44
gb|ACU14853.1| unknown [Glycine max]                                  185   1e-44

>ref|XP_002264869.2| PREDICTED: 50S ribosomal protein L19, chloroplastic [Vitis
           vinifera] gi|296088907|emb|CBI38456.3| unnamed protein
           product [Vitis vinifera]
          Length = 231

 Score =  200 bits (509), Expect = 4e-49
 Identities = 126/233 (54%), Positives = 141/233 (60%), Gaps = 23/233 (9%)
 Frame = -2

Query: 860 MASSLLPQALFSNPRTTH-----------FPS-HISSLKPSSITLSNVSSTRVRSKIVPI 717
           MAS +LPQALF  PR+++           FPS   SSL  + ++ S  SS        PI
Sbjct: 1   MASKVLPQALFITPRSSNQWPPKKLGLSTFPSPRSSSLNLNRLSTSRFSSNSFAFHFRPI 60

Query: 716 VTRQNKRRSVLVRAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV-----------KLG 570
           V   + +R  +VRAE                                          KLG
Sbjct: 61  VV--SPKRFFIVRAEADNEGELGADENTEEEETVSETESEVKLDAEDEAKPPRKPRVKLG 118

Query: 569 DIMGILNKRAIEASDKERPTPDLRTGDIVQIKLEVPANRRRQSIYKGIVISKQNAGIHTT 390
           DIMGILNKRAIEAS+KERP PDLRTGDIV+IKLEVP NRRR SIYKGIVISKQNAGIHTT
Sbjct: 119 DIMGILNKRAIEASEKERPVPDLRTGDIVEIKLEVPENRRRLSIYKGIVISKQNAGIHTT 178

Query: 389 IRIRNIIAGIGVEIVFPVYSPNIKEIXXXXXXXXXRARLYFLRDKLPRLSTFK 231
           IR+R IIAG+GVEIVFPVYSPNIKEI         RARLY+LRDKLPRLSTFK
Sbjct: 179 IRVRRIIAGVGVEIVFPVYSPNIKEIKVVNHRKVRRARLYYLRDKLPRLSTFK 231


>emb|CAN82787.1| hypothetical protein VITISV_037813 [Vitis vinifera]
          Length = 231

 Score =  197 bits (501), Expect = 3e-48
 Identities = 125/231 (54%), Positives = 138/231 (59%), Gaps = 21/231 (9%)
 Frame = -2

Query: 860 MASSLLPQALFSNPRTTH-----------FPSHIS-SLKPSSITLSNVSSTRVRSKIVPI 717
           MAS +LPQALF  PR+++           FPS  S SL  + ++ S  SS        PI
Sbjct: 1   MASKVLPQALFITPRSSNQXPPKKLGLSTFPSPRSXSLNLNRLSTSRFSSNSFXFHFRPI 60

Query: 716 VTRQNKRRSVLVRA---------EGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKLGDI 564
           V    +   V   A         E                              VKLGDI
Sbjct: 61  VVSPKRFFIVXAEADNEGELGPDENTEEEETVSETESEVKLDAEDEAKPPRKPRVKLGDI 120

Query: 563 MGILNKRAIEASDKERPTPDLRTGDIVQIKLEVPANRRRQSIYKGIVISKQNAGIHTTIR 384
           MGILNKRAIEAS+KERP PDLRTGDIV+IKLEVP NRRR SIYKGIVISKQNAGIHTTIR
Sbjct: 121 MGILNKRAIEASEKERPVPDLRTGDIVEIKLEVPENRRRLSIYKGIVISKQNAGIHTTIR 180

Query: 383 IRNIIAGIGVEIVFPVYSPNIKEIXXXXXXXXXRARLYFLRDKLPRLSTFK 231
           +R IIAG+GVEIVFPVYSPNIKEI         RARLY+LRDKLPRLSTFK
Sbjct: 181 VRRIIAGVGVEIVFPVYSPNIKEIKVVNHRKVRRARLYYLRDKLPRLSTFK 231


>ref|XP_004147231.1| PREDICTED: 50S ribosomal protein L19, chloroplastic-like [Cucumis
           sativus] gi|449523724|ref|XP_004168873.1| PREDICTED: 50S
           ribosomal protein L19, chloroplastic-like [Cucumis
           sativus]
          Length = 221

 Score =  187 bits (474), Expect = 4e-45
 Identities = 113/222 (50%), Positives = 139/222 (62%), Gaps = 12/222 (5%)
 Frame = -2

Query: 860 MASSLLPQALFSNPRTTH--FPSHI---SSLKPSSITLSNVSSTRVRSKIVPIVTRQNKR 696
           MAS +LPQA+ S PR  +   P  +   S++  + ++ S +SS+ + S     V     R
Sbjct: 1   MASKILPQAVISIPRNPNQCAPRRLGFCSAVSGTRVSFSTLSSSSIGSHFHHTVAAP-LR 59

Query: 695 RSVLVRAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV-------KLGDIMGILNKRAI 537
           R+ +VRAE                                      KLGD+MGILNKRAI
Sbjct: 60  RAFVVRAEANPEADSAAEEAPEAEVEAAVESDAQPEEEKPSRKPRVKLGDVMGILNKRAI 119

Query: 536 EASDKERPTPDLRTGDIVQIKLEVPANRRRQSIYKGIVISKQNAGIHTTIRIRNIIAGIG 357
           EAS+KERP PD+RTGDIV++KLEV  NRRR S+Y+GIVISKQNAGIHTTIRIR IIAG+G
Sbjct: 120 EASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVG 179

Query: 356 VEIVFPVYSPNIKEIXXXXXXXXXRARLYFLRDKLPRLSTFK 231
           VEIVFP+YSPNI+EI         RARLY+LRDKLP+LSTFK
Sbjct: 180 VEIVFPLYSPNIREIRVVSHRKVRRARLYYLRDKLPKLSTFK 221


>ref|NP_001236421.1| uncharacterized protein LOC100500328 [Glycine max]
           gi|255630036|gb|ACU15370.1| unknown [Glycine max]
          Length = 213

 Score =  185 bits (470), Expect = 1e-44
 Identities = 95/116 (81%), Positives = 102/116 (87%)
 Frame = -2

Query: 578 KLGDIMGILNKRAIEASDKERPTPDLRTGDIVQIKLEVPANRRRQSIYKGIVISKQNAGI 399
           KLGDIMGILN+RAIEAS+K+RPTPD+RTGDIV+IKLEVP N+RR SIYKGIVISKQNAGI
Sbjct: 98  KLGDIMGILNQRAIEASEKQRPTPDIRTGDIVEIKLEVPENKRRLSIYKGIVISKQNAGI 157

Query: 398 HTTIRIRNIIAGIGVEIVFPVYSPNIKEIXXXXXXXXXRARLYFLRDKLPRLSTFK 231
           HTTIRIR IIAG GVEIVFPVYSPNIKEI         RARLY+LRDKLPR STFK
Sbjct: 158 HTTIRIRRIIAGTGVEIVFPVYSPNIKEIKVVSHRKVRRARLYYLRDKLPRFSTFK 213


>gb|ACU14853.1| unknown [Glycine max]
          Length = 212

 Score =  185 bits (470), Expect = 1e-44
 Identities = 95/116 (81%), Positives = 102/116 (87%)
 Frame = -2

Query: 578 KLGDIMGILNKRAIEASDKERPTPDLRTGDIVQIKLEVPANRRRQSIYKGIVISKQNAGI 399
           KLGDIMGILN+RAIEAS+K+RPTPD+RTGDIV+IKLEVP N+RR SIYKGIVISKQNAGI
Sbjct: 97  KLGDIMGILNQRAIEASEKQRPTPDIRTGDIVEIKLEVPENKRRLSIYKGIVISKQNAGI 156

Query: 398 HTTIRIRNIIAGIGVEIVFPVYSPNIKEIXXXXXXXXXRARLYFLRDKLPRLSTFK 231
           HTTIRIR IIAG GVEIVFPVYSPNIKEI         RARLY+LRDKLPR STFK
Sbjct: 157 HTTIRIRRIIAGTGVEIVFPVYSPNIKEIKVVSHRKVRRARLYYLRDKLPRFSTFK 212