BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003702
         (2120 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267566.1| PREDICTED: guanine nucleotide-binding protei...   720   0.0  
ref|XP_002521110.1| GTP-binding protein-plant, putative [Ricinus...   709   0.0  
ref|NP_001234382.1| nuclear GTPase-like [Solanum lycopersicum] g...   691   0.0  
ref|XP_002884623.1| GTP-binding family protein [Arabidopsis lyra...   687   0.0  
emb|CAN64618.1| hypothetical protein VITISV_001358 [Vitis vinifera]   684   0.0  

>ref|XP_002267566.1| PREDICTED: guanine nucleotide-binding protein-like 3 homolog [Vitis
            vinifera] gi|297744311|emb|CBI37281.3| unnamed protein
            product [Vitis vinifera]
          Length = 596

 Score =  720 bits (1858), Expect = 0.0
 Identities = 378/537 (70%), Positives = 432/537 (80%), Gaps = 13/537 (2%)
 Frame = -2

Query: 1954 KVEKDPGIPNDWPFKEQELQALEARRAKAIXXXXXXXXXXXXXXXXXXLGLL-EEDMPKV 1778
            KVEKDPGIPNDWPFKEQEL+ALEARRA+A+                  LGLL ++DM K+
Sbjct: 46   KVEKDPGIPNDWPFKEQELKALEARRARALEELEQKKAARKERAQKRKLGLLKDDDMSKL 105

Query: 1777 ADVASGKERTKE----------VGISRENSDRAFYKELVKVIEASDVIVEVLDARDPLGT 1628
            AD+AS KE+  E           G +++NSDRAFYKELV+VIEASDVI+EVLDARDPLGT
Sbjct: 106  ADMASAKEQDFEEGKVSEEPMRTGKNKDNSDRAFYKELVEVIEASDVILEVLDARDPLGT 165

Query: 1627 RCADMEKMVLKSGPEKHIVLLLNKIDLVPREAVEKWLKYLREELPAVAFKCSTQQQRSNY 1448
            RC DMEKMV++SGP KH+VLLLNKIDLVPREAVEKWLKYLREELPAVAFKCSTQ+QR+  
Sbjct: 166  RCVDMEKMVMRSGPNKHLVLLLNKIDLVPREAVEKWLKYLREELPAVAFKCSTQEQRTKL 225

Query: 1447 GWKSASKSAKPNNLLQTSDCLGAETLIKLLKNYSRSYEIKKSITVGVIGLPNVGKSSLIN 1268
            GW+S SK+AKP+N+LQTSDCLGAETLIKLLKNYSRS+EIK SITVG+IGLPNVGKSSLIN
Sbjct: 226  GWRSKSKAAKPSNILQTSDCLGAETLIKLLKNYSRSHEIKTSITVGIIGLPNVGKSSLIN 285

Query: 1267 SLRRCHVVNVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSGESDASIALRNCKRIEKL 1088
            SL+R HVVNVGATPGLTRS QEV LDKNV LLDCPGVVMLKSG +D SIALRNCKRIEKL
Sbjct: 286  SLKRSHVVNVGATPGLTRSRQEVHLDKNVILLDCPGVVMLKSGSNDTSIALRNCKRIEKL 345

Query: 1087 DDPIDPVKEILKLCPAETLVSLYKVPSFDSVEDFLHKVATVRGRLKKGGIVDIEAAARIV 908
            DD I+PVKEILKLCPAE LV+LYK+ SF+SV+DFL KVAT+RG+LKKGG+VD EAAAR+V
Sbjct: 346  DDVINPVKEILKLCPAELLVTLYKISSFESVDDFLQKVATLRGKLKKGGVVDTEAAARMV 405

Query: 907  LHDWNEGKIPYYTLPPIRNQ-EVLESSIVSELGKEFNVDEVYKGESSFIGSLKSVEDFRH 731
            LHDWN+GKIPYYT+PP RNQ E LE++IVSE GKEFN+DEVY  ESSFIGSLKSV+DF  
Sbjct: 406  LHDWNQGKIPYYTMPPSRNQGENLEATIVSEFGKEFNIDEVYNSESSFIGSLKSVDDFHP 465

Query: 730  VEVPPNHPLTFDEKMLEDEVQTEATMQDDGH-PQMTRDGDDHSMDDNETEAAEGTKSKTI 554
            VE+PPN PL+FDEKMLE +VQ + + Q D    +M+  GDD SM   E +AA  TK+KT 
Sbjct: 466  VELPPNSPLSFDEKMLEGDVQPQPSTQGDQEAKEMSGGGDDESMGVEE-DAAGKTKAKTA 524

Query: 553  NSRQNEKLYTAEGILNPRLQXXXXXXXXXXXXXSTNDAMDADYDFKVDYRNKASAMD 383
             SRQNEKLY AEGILNP+++              T    D DYDFKVDY  K S M+
Sbjct: 525  GSRQNEKLYAAEGILNPKIK--RAEKKKRKKANKTTAMEDDDYDFKVDYNKKGSTME 579


>ref|XP_002521110.1| GTP-binding protein-plant, putative [Ricinus communis]
            gi|223539679|gb|EEF41261.1| GTP-binding protein-plant,
            putative [Ricinus communis]
          Length = 599

 Score =  709 bits (1831), Expect = 0.0
 Identities = 371/532 (69%), Positives = 427/532 (80%), Gaps = 7/532 (1%)
 Frame = -2

Query: 1954 KVEKDPGIPNDWPFKEQELQALEARRAKAIXXXXXXXXXXXXXXXXXXLGLLEEDMPKVA 1775
            KVEKDPGIPNDWPFKEQEL+ALEARRA+A+                  LGLLE+   K  
Sbjct: 46   KVEKDPGIPNDWPFKEQELKALEARRARALEELEQKKAARKERAQKRKLGLLEDASAKEQ 105

Query: 1774 DVASGKERTKE----VGISRENSDRAFYKELVKVIEASDVIVEVLDARDPLGTRCADMEK 1607
            +  S +++T E    +  +R+NSDRAFYKELVKVIE SDVI+EVLDARDPLGTRC DME 
Sbjct: 106  E--SEEQKTNEDFGRLARNRDNSDRAFYKELVKVIEESDVILEVLDARDPLGTRCVDMEN 163

Query: 1606 MVLKSGPEKHIVLLLNKIDLVPREAVEKWLKYLREELPAVAFKCSTQQQRSNYGWKSASK 1427
            MV+KS   KH+VLLLNKIDLVPREAVEKWLKYLREE P VAFKCSTQ+QRSN GWKS+SK
Sbjct: 164  MVMKSSHNKHLVLLLNKIDLVPREAVEKWLKYLREEFPTVAFKCSTQEQRSNLGWKSSSK 223

Query: 1426 SAKPNNLLQTSDCLGAETLIKLLKNYSRSYEIKKSITVGVIGLPNVGKSSLINSLRRCHV 1247
            +AK +N+LQTSDCLGAETLIKLLKNYSRS++IKKSITVG+IGLPNVGKSSLINSL+R HV
Sbjct: 224  AAKASNILQTSDCLGAETLIKLLKNYSRSHDIKKSITVGIIGLPNVGKSSLINSLKRSHV 283

Query: 1246 VNVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSGESDASIALRNCKRIEKLDDPIDPV 1067
            VNVGATPGLTRSMQEVQLDKNVKLLDCPGVV+LKS E+DASIALRNCKRIEKLDDPI PV
Sbjct: 284  VNVGATPGLTRSMQEVQLDKNVKLLDCPGVVLLKSVENDASIALRNCKRIEKLDDPISPV 343

Query: 1066 KEILKLCPAETLVSLYKVPSFDSVEDFLHKVATVRGRLKKGGIVDIEAAARIVLHDWNEG 887
            KEILKLCPA  LV+LYK P+F+SV+DFL KVATVRGRLKKGGI+D++AAARIVLHDWNEG
Sbjct: 344  KEILKLCPARLLVTLYKTPNFESVDDFLQKVATVRGRLKKGGIIDVDAAARIVLHDWNEG 403

Query: 886  KIPYYTLPPIRNQ-EVLESSIVSELGKEFNVDEVYKGESSFIGSLKSVEDFRHVEVPPNH 710
            KI YYT+PP RNQ E  ES IVSELGKEFN+DEVY GE+SFIGSLKSV DF  VEVPP+ 
Sbjct: 404  KIAYYTMPPTRNQEEPSESKIVSELGKEFNIDEVYTGETSFIGSLKSVNDFDPVEVPPSC 463

Query: 709  PLTFDEKMLEDEVQTE-ATMQDDGHPQMTRDGDDHSMDDNETEAAEGTKSKTINSRQNEK 533
            P++F+E M+E +++ + +T  D+    M+ DG+D  M   E +  +  K KT +SRQNEK
Sbjct: 464  PISFNESMIEGDLEAQPSTRGDENAEDMSDDGEDQPMASEENDTNKANKGKTPSSRQNEK 523

Query: 532  LYTAEGILNPRLQXXXXXXXXXXXXXSTNDAMDADYDFKVDY-RNKASAMDV 380
            LYTAEG+LN +++                DAMD DYDFKVDY + K SAMDV
Sbjct: 524  LYTAEGMLNTKMKRAEKKRRKKAGKV---DAMDGDYDFKVDYFKKKGSAMDV 572


>ref|NP_001234382.1| nuclear GTPase-like [Solanum lycopersicum] gi|83630757|gb|ABC26876.1|
            putative nuclear GTPase [Solanum lycopersicum]
          Length = 609

 Score =  691 bits (1784), Expect = 0.0
 Identities = 371/543 (68%), Positives = 420/543 (77%), Gaps = 17/543 (3%)
 Frame = -2

Query: 1960 RPKVEKDPGIPNDWPFKEQELQALEARRAKAIXXXXXXXXXXXXXXXXXXLGLLEED-MP 1784
            +PKVEKDPGIPNDWPFKEQEL+ALEARRA+A+                  LGLLE+D + 
Sbjct: 44   KPKVEKDPGIPNDWPFKEQELKALEARRARALDELEQKKVARKERAKKRKLGLLEDDDVS 103

Query: 1783 KVADVASGKERTKEVG------------ISRENSDRAFYKELVKVIEASDVIVEVLDARD 1640
            K+  + S KE  KEVG              R+NS+RAFYKELVKVI+ASDVI+EVLDARD
Sbjct: 104  KLEGLTSTKE--KEVGGGRVNDGSASFVKQRDNSERAFYKELVKVIDASDVILEVLDARD 161

Query: 1639 PLGTRCADMEKMVLKSGPEKHIVLLLNKIDLVPREAVEKWLKYLREELPAVAFKCSTQQQ 1460
            PLGTRC DMEKMV+++GPEKH+VLLLNKIDLVPREA EKWLKYLREELP VAFKCSTQ+Q
Sbjct: 162  PLGTRCLDMEKMVMRAGPEKHLVLLLNKIDLVPREAAEKWLKYLREELPTVAFKCSTQEQ 221

Query: 1459 RSNYGWKSASKS--AKPNNLLQTSDCLGAETLIKLLKNYSRSYEIKKSITVGVIGLPNVG 1286
            +SN GWK +SK+  +K +NLLQTSDCLGAETLIKLLKNYSRS+EIKKSITVGVIGLPNVG
Sbjct: 222  KSNLGWKPSSKAGKSKTSNLLQTSDCLGAETLIKLLKNYSRSHEIKKSITVGVIGLPNVG 281

Query: 1285 KSSLINSLRRCHVVNVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKS-GESDASIALRN 1109
            KSSLINSL+R HVVNVGATPGLTRS+QEVQLDKNVKLLDCPGVVML+S  E DASIALRN
Sbjct: 282  KSSLINSLKRSHVVNVGATPGLTRSLQEVQLDKNVKLLDCPGVVMLRSASEDDASIALRN 341

Query: 1108 CKRIEKLDDPIDPVKEILKLCPAETLVSLYKVPSFDSVEDFLHKVATVRGRLKKGGIVDI 929
            CKRIEKLDDPI PVKEILKLCP   LV++YK+P+FDSV+DFL KVA VRG+LKKGGIVD 
Sbjct: 342  CKRIEKLDDPIGPVKEILKLCPERMLVTIYKIPTFDSVDDFLQKVAMVRGKLKKGGIVDT 401

Query: 928  EAAARIVLHDWNEGKIPYYTLPPIRNQ-EVLESSIVSELGKEFNVDEVYKGESSFIGSLK 752
            +AAARIVLHDWNEGK+PYYTLPP RN+ E LE  IVSE GKEFN+DEVY  ESS IGSLK
Sbjct: 402  DAAARIVLHDWNEGKVPYYTLPPTRNEGEHLEVKIVSEFGKEFNIDEVYGSESSIIGSLK 461

Query: 751  SVEDFRHVEVPPNHPLTFDEKMLEDEVQTEATMQDDGHPQMTRDGDDHSMDDNETEAAEG 572
            SV DF  VEVP N P+ FD+ MLED +Q      D+    +  +  D  MD  E + A+ 
Sbjct: 462  SVNDFNPVEVPSNRPVIFDDNMLEDNLQQPLAESDNATENLVSENGDEPMDSGEGDGAQ- 520

Query: 571  TKSKTINSRQNEKLYTAEGILNPRLQXXXXXXXXXXXXXSTNDAMDADYDFKVDYRNKAS 392
            T+ K+ +SRQNEKLY  EG+LN + Q             ST   MD DYDFKVDY  K S
Sbjct: 521  TRGKSASSRQNEKLYGEEGMLNTK-QKKAEKKRRKKDKPSTAIDMDGDYDFKVDYIKKDS 579

Query: 391  AMD 383
            AMD
Sbjct: 580  AMD 582


>ref|XP_002884623.1| GTP-binding family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297330463|gb|EFH60882.1| GTP-binding family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 582

 Score =  687 bits (1773), Expect = 0.0
 Identities = 359/529 (67%), Positives = 416/529 (78%), Gaps = 3/529 (0%)
 Frame = -2

Query: 1960 RPKVEKDPGIPNDWPFKEQELQALEARRAKAIXXXXXXXXXXXXXXXXXXLGLLEEDMPK 1781
            +P+VEKDPGIPNDWPFKEQEL+ALE RRA+A+                  LGL+++D  K
Sbjct: 44   KPRVEKDPGIPNDWPFKEQELKALEVRRARALEEIEQKKEARKERAKKRKLGLVDDDDTK 103

Query: 1780 VADVASGKERTKEVGISRENSDRAFYKELVKVIEASDVIVEVLDARDPLGTRCADMEKMV 1601
              +  + +E TK + + R+NS+RAFYKELVKVIE SDVI+EVLDARDPLGTRC DME+MV
Sbjct: 104  TEE-ETREEFTKVLNV-RDNSERAFYKELVKVIELSDVILEVLDARDPLGTRCTDMERMV 161

Query: 1600 LKSGPEKHIVLLLNKIDLVPREAVEKWLKYLREELPAVAFKCSTQQQRSNYGWKSASKSA 1421
            +++GP KH+VLLLNKIDLVPREA EKWLKYLREE PAVAFKCSTQ+QRSN GWKS SK++
Sbjct: 162  MQAGPNKHLVLLLNKIDLVPREAAEKWLKYLREEFPAVAFKCSTQEQRSNLGWKS-SKAS 220

Query: 1420 KPNNLLQTSDCLGAETLIKLLKNYSRSYEIKKSITVGVIGLPNVGKSSLINSLRRCHVVN 1241
            KP+N+LQTSDCLGA+TLIKLLKNYSRS+E+KKSITVG+IGLPNVGKSSLINSL+R HVVN
Sbjct: 221  KPSNMLQTSDCLGADTLIKLLKNYSRSHELKKSITVGIIGLPNVGKSSLINSLKRAHVVN 280

Query: 1240 VGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSGESDASIALRNCKRIEKLDDPIDPVKE 1061
            VGATPGLTRS+QEV LDKNVKLLDCPGVVMLKS  +DASIALRNCKRIEKLDDP+ PVKE
Sbjct: 281  VGATPGLTRSLQEVHLDKNVKLLDCPGVVMLKSSGNDASIALRNCKRIEKLDDPVSPVKE 340

Query: 1060 ILKLCPAETLVSLYKVPSFDSVEDFLHKVATVRGRLKKGGIVDIEAAARIVLHDWNEGKI 881
            ILKLCP + LV+LYK+PSF++V+DFL+KVATVRG+LKKGG+VDIEAAARIVLHDWNEGKI
Sbjct: 341  ILKLCPTQMLVTLYKIPSFEAVDDFLYKVATVRGKLKKGGLVDIEAAARIVLHDWNEGKI 400

Query: 880  PYYTLPPIRNQ-EVLESSIVSELGKEFNVDEVYKGESSFIGSLKSVEDFRHVEVPPNHPL 704
            PYYT+PP R+Q    ES IVSEL K+FN+DEVY GESSFIGSLK+V +F  VEVP N PL
Sbjct: 401  PYYTMPPKRDQGGHAESKIVSELAKDFNIDEVYSGESSFIGSLKTVNEFNPVEVPSNGPL 460

Query: 703  TFDEKMLEDEVQTEATMQDDGHPQMTRDGDDHSMDDNETEAAEGTKSKTINSRQNEKLYT 524
             FDE M+EDE +TE     +  P+   D DD SM   E E A  +K K+   RQN KLY 
Sbjct: 461  NFDETMIEDESKTET----EEEPEHDSD-DDESMGGEEEEEAGKSKEKSETGRQNVKLYA 515

Query: 523  AEGILNPRLQ--XXXXXXXXXXXXXSTNDAMDADYDFKVDYRNKASAMD 383
            AE +LN + Q                  D MD DYDFKVDYR K    D
Sbjct: 516  AESMLNTKKQKAEKKKRKKAKKAGGGEEDLMDGDYDFKVDYRKKKDGED 564


>emb|CAN64618.1| hypothetical protein VITISV_001358 [Vitis vinifera]
          Length = 593

 Score =  684 bits (1766), Expect = 0.0
 Identities = 366/538 (68%), Positives = 422/538 (78%), Gaps = 14/538 (2%)
 Frame = -2

Query: 1954 KVEKDPGIPNDWPFKEQELQALEARRAKAIXXXXXXXXXXXXXXXXXXLGLL-EEDMPKV 1778
            KVEKDPGIPNDWPFKEQEL+ALEARRA+A+                  LGLL ++DM K+
Sbjct: 46   KVEKDPGIPNDWPFKEQELKALEARRARALEELEQKKAARKERAQKRKLGLLKDDDMSKL 105

Query: 1777 ADVASGKERTKE----------VGISRENSDRAFYKELVKVIEASDVIVEVLDARDPLGT 1628
            AD+AS KE+  E           G +++NSDRAFYKELV+V+EASDVI+EVLDARDPLGT
Sbjct: 106  ADMASAKEQDFEEGKVSEEPMRTGKNKDNSDRAFYKELVEVVEASDVILEVLDARDPLGT 165

Query: 1627 RCADMEKMVLKSGPEKHIVLLLNKI-DLVPREAVEKWLKYLREELPAVAFKCSTQQQRSN 1451
            RC DMEKM+        ++ +   I DLVPREAVEKWLKYLREELPAVAFKCSTQ+QR+ 
Sbjct: 166  RCVDMEKML------PMLIFIHTWISDLVPREAVEKWLKYLREELPAVAFKCSTQEQRTK 219

Query: 1450 YGWKSASKSAKPNNLLQTSDCLGAETLIKLLKNYSRSYEIKKSITVGVIGLPNVGKSSLI 1271
             GW+S SK+AKP+N+LQTSDCLGAETLIKLLKNYSRS+EIKKSITVG+IGLPNVGKSSLI
Sbjct: 220  LGWRSKSKAAKPSNILQTSDCLGAETLIKLLKNYSRSHEIKKSITVGIIGLPNVGKSSLI 279

Query: 1270 NSLRRCHVVNVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSGESDASIALRNCKRIEK 1091
            NSL+R HVVNVGATPGLTRS QEV LDKNV LLDCPGVVMLKSG +D SIALRNCKRIEK
Sbjct: 280  NSLKRSHVVNVGATPGLTRSRQEVHLDKNVILLDCPGVVMLKSGSNDTSIALRNCKRIEK 339

Query: 1090 LDDPIDPVKEILKLCPAETLVSLYKVPSFDSVEDFLHKVATVRGRLKKGGIVDIEAAARI 911
            LDD I+PVKEILKLCPAE LV+LYK+ SF+SV+DFL KVAT+RG+LKKGG+VD EAAAR+
Sbjct: 340  LDDVINPVKEILKLCPAELLVTLYKISSFESVDDFLQKVATLRGKLKKGGVVDTEAAARM 399

Query: 910  VLHDWNEGKIPYYTLPPIRNQ-EVLESSIVSELGKEFNVDEVYKGESSFIGSLKSVEDFR 734
            VLHDWN+GKIPYYT+PP RNQ E LE++IVSE GKEFN+DEVY  ESSFIGSLKSV+DF 
Sbjct: 400  VLHDWNQGKIPYYTMPPSRNQGENLEATIVSEFGKEFNIDEVYNSESSFIGSLKSVDDFH 459

Query: 733  HVEVPPNHPLTFDEKMLEDEVQTEATMQDDGH-PQMTRDGDDHSMDDNETEAAEGTKSKT 557
             VE+PPN PL+FDEKMLE +VQ + + Q D    +M+  GDD SM   E +AA  TK+KT
Sbjct: 460  PVELPPNSPLSFDEKMLEGDVQPQPSTQGDQEAKEMSGGGDDESMGVEE-DAAGKTKAKT 518

Query: 556  INSRQNEKLYTAEGILNPRLQXXXXXXXXXXXXXSTNDAMDADYDFKVDYRNKASAMD 383
              SRQNEKLY AEGILNP+++              T    D DYDFKVDY  K S M+
Sbjct: 519  AGSRQNEKLYAAEGILNPKIK--RAEKKKRKKANKTTAMEDDDYDFKVDYNKKGSTME 574