BLASTX nr result

ID: Coptis24_contig00003696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003696
         (1725 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275899.1| PREDICTED: uncharacterized protein LOC100262...   139   2e-30
emb|CAN77162.1| hypothetical protein VITISV_029831 [Vitis vinifera]   138   4e-30
ref|XP_004147022.1| PREDICTED: uncharacterized protein LOC101214...   133   1e-28
gb|ADN34011.1| translation initiation factor [Cucumis melo subsp...   133   2e-28
ref|XP_003540800.1| PREDICTED: uncharacterized protein LOC100820...   126   2e-26

>ref|XP_002275899.1| PREDICTED: uncharacterized protein LOC100262348 [Vitis vinifera]
          Length = 401

 Score =  139 bits (350), Expect = 2e-30
 Identities = 109/319 (34%), Positives = 140/319 (43%), Gaps = 17/319 (5%)
 Frame = -2

Query: 1406 ASVKGLTPDELSRLPTGPRERSAXXXXXXXXXXXGFKSYGSDRV--GGGSRYXXXXXXXX 1233
            +  KGLT ++L  LPTGPR+RSA            F+SYGS+    GG SRY        
Sbjct: 89   SQTKGLTHEDLMMLPTGPRQRSAEELDRGRLGGG-FRSYGSNGSYEGGRSRYGGGEDSAN 147

Query: 1232 XXXXXXXXXXXXXXXXXXXXE-PLPPSKADEVDDWGAMKKSMGGATXXXXXXXXXXXXXX 1056
                                   L PS+ADE+DDWGA KKS  G                
Sbjct: 148  PRWGPRGSEERRQGGFGRDSSRELAPSRADEIDDWGAAKKSTVG--------------NG 193

Query: 1055 XXXXXXXXXXXXXXRADEADNWLAKKSFTPSPVEPXXXXXXXXGFES------GYQRDIP 894
                          RADE+ +W++ KSFTPS            GFES      G+     
Sbjct: 194  FERRDRGGFFDSQSRADESASWVSNKSFTPSE---GRRFGGGGGFESLRERRGGFDSASD 250

Query: 893  IGGGADGDSWGKKRGEEVSESVG----RPRLVLQPRSVPISNGEQQQQRXXXXXXXXXXX 726
             GGGAD +SWG+K+ E    + G    RP+L+LQPR+VP+++G+Q               
Sbjct: 251  GGGGADSESWGRKKEEGSGNANGSAGSRPKLILQPRTVPVNDGQQPGS---------GSV 301

Query: 725  XXXXXSNPFGAARPREEVLGERGEDWKKIDEHL----XXXXXXXXXXXXXEPXXXXXXXX 558
                  NPFG ARPREEVL E+G+DWK+I+E L                  P        
Sbjct: 302  AKPKGPNPFGEARPREEVLAEKGQDWKEIEEKLESVKLKDVGSPGVGQTDGPSFGKRSFG 361

Query: 557  XGNGRMSSPEDRTERSWRR 501
             GN R S PE R+E+SWR+
Sbjct: 362  SGNARASLPESRSEKSWRK 380


>emb|CAN77162.1| hypothetical protein VITISV_029831 [Vitis vinifera]
          Length = 1434

 Score =  138 bits (348), Expect = 4e-30
 Identities = 109/319 (34%), Positives = 139/319 (43%), Gaps = 17/319 (5%)
 Frame = -2

Query: 1406 ASVKGLTPDELSRLPTGPRERSAXXXXXXXXXXXGFKSYGSDRV--GGGSRYXXXXXXXX 1233
            +  KGLT ++L  LPTGPR+RSA            F+SYGS+    GG SRY        
Sbjct: 89   SQTKGLTHEDLMMLPTGPRQRSAEELDRGRLGGG-FRSYGSNGSYEGGRSRYGGGEDSAN 147

Query: 1232 XXXXXXXXXXXXXXXXXXXXE-PLPPSKADEVDDWGAMKKSMGGATXXXXXXXXXXXXXX 1056
                                   L PS+ADE+DDWGA KKS  G                
Sbjct: 148  PRWGPRGSEERRQGGFGRDSSRELAPSRADEIDDWGAAKKSTVG--------------NG 193

Query: 1055 XXXXXXXXXXXXXXRADEADNWLAKKSFTPSPVEPXXXXXXXXGFES------GYQRDIP 894
                          RADE+ +W++ KSFTPS            GFES      G+     
Sbjct: 194  FERRDRGGFFDSQSRADESASWVSNKSFTPSE---GRRFGGGGGFESLRERRGGFDSASD 250

Query: 893  IGGGADGDSWGKKRGEEVSESVG----RPRLVLQPRSVPISNGEQQQQRXXXXXXXXXXX 726
             GGGAD +SWG+K+ E    + G    RP+L+LQPR+VP+++G+Q               
Sbjct: 251  GGGGADSESWGRKKEEGSGNANGSAGSRPKLILQPRTVPVNDGQQPGS---------GSV 301

Query: 725  XXXXXSNPFGAARPREEVLGERGEDWKKIDEHL----XXXXXXXXXXXXXEPXXXXXXXX 558
                  NPFG ARPREEVL E+G+DWK+I+E L                  P        
Sbjct: 302  AKPKGPNPFGEARPREEVLAEKGQDWKEIEEKLESVKLKDVGSPGVGQTDGPSFGKRSFG 361

Query: 557  XGNGRMSSPEDRTERSWRR 501
             GN R S PE R E+SWR+
Sbjct: 362  SGNARASLPESRXEKSWRK 380


>ref|XP_004147022.1| PREDICTED: uncharacterized protein LOC101214573 [Cucumis sativus]
            gi|449489695|ref|XP_004158389.1| PREDICTED:
            uncharacterized LOC101214573 [Cucumis sativus]
          Length = 405

 Score =  133 bits (335), Expect = 1e-28
 Identities = 120/377 (31%), Positives = 151/377 (40%), Gaps = 30/377 (7%)
 Frame = -2

Query: 1667 MATSVSAWKKPAVAAAGTWALDXXXXXXXXXXXXXXXXXXXXQPLSDFPXXXXXXXXXXX 1488
            MA +VS W KP     G WALD                    +P +DFP           
Sbjct: 1    MAATVSPWGKP-----GAWALDAEEHEAELLKDQEEQSRHQEEPSADFPSLAAAAATKPK 55

Query: 1487 XXXXXXXXLAEFNNGKSVTHGSSNKGVASV--KGLTPDELSRLPTGPRERSAXXXXXXXX 1314
                    L+EF      T+G       S   KGLT ++L  LPTGPR+R+A        
Sbjct: 56   KKKGQSIPLSEFQ-----TYGGPKPSAQSSDPKGLTAEDLMMLPTGPRQRTAEEMDRNRL 110

Query: 1313 XXXGFKSYGSDRV-GGGSRYXXXXXXXXXXXXXXXXXXXXXXXXXXXXE---PLPPSKAD 1146
                FKS+G + +   G+RY                            E      PS+AD
Sbjct: 111  GGG-FKSWGQNSLYDRGNRYSNSEDSPNSRRSSRVFDESRRTNDGSDREFRRESLPSRAD 169

Query: 1145 EVDDWGAMKKSMGGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXRADEADNWLAKKSFTP 966
            E+DDWGA KK M G                              +ADE+D+W++ KSFTP
Sbjct: 170  EIDDWGAGKKPMVG----------NGFERRERGGGGGFFDSHSSKADESDSWVSSKSFTP 219

Query: 965  SPVEPXXXXXXXXGFESGYQRDIPI-GGGADGDSWGKK---------------------- 855
            S            GF+   +   P  GGGAD D+WG+K                      
Sbjct: 220  SE------GRRSGGFDRERRGGFPTSGGGADSDNWGRKPDGARGGIGENGGSADSENWGK 273

Query: 854  RGEEVSESVG-RPRLVLQPRSVPISNGEQQQQRXXXXXXXXXXXXXXXXSNPFGAARPRE 678
            R E V   +G RPRL LQPRS+P++NG Q+                   SNPFG ARPRE
Sbjct: 274  RSEGVRSGIGERPRLNLQPRSIPLNNGNQEAS---------GVAVKPKGSNPFGNARPRE 324

Query: 677  EVLGERGEDWKKIDEHL 627
            EVL E+G+DWKKIDE L
Sbjct: 325  EVLAEKGQDWKKIDEQL 341


>gb|ADN34011.1| translation initiation factor [Cucumis melo subsp. melo]
          Length = 405

 Score =  133 bits (334), Expect = 2e-28
 Identities = 118/376 (31%), Positives = 149/376 (39%), Gaps = 29/376 (7%)
 Frame = -2

Query: 1667 MATSVSAWKKPAVAAAGTWALDXXXXXXXXXXXXXXXXXXXXQPLSDFPXXXXXXXXXXX 1488
            MA +VS W KP     G WALD                    +P +DFP           
Sbjct: 1    MAATVSPWGKP-----GAWALDAEEHEAELLKDQQDQSRHQSEPSADFPSLAAAAATKPK 55

Query: 1487 XXXXXXXXLAEFNNGKSVTHGSSNKGVASV--KGLTPDELSRLPTGPRERSAXXXXXXXX 1314
                    L+EF      T+G       S   KGLT ++L  LPTGPR+R+A        
Sbjct: 56   KKKGQSIPLSEFQ-----TYGGPRPAAQSTDPKGLTAEDLMMLPTGPRQRTAEEMDRNRL 110

Query: 1313 XXXGFKSYGSDRV-GGGSRYXXXXXXXXXXXXXXXXXXXXXXXXXXXXE---PLPPSKAD 1146
                FKS+G + +   G+RY                            E      PS+AD
Sbjct: 111  GGG-FKSWGQNSLYDRGNRYSNSEDSPNSRRSSRVFDESRRSNDGSDREFRRESLPSRAD 169

Query: 1145 EVDDWGAMKKSMGGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXRADEADNWLAKKSFTP 966
            E+DDWGA KK M G                              +ADE+D+W++ KSFTP
Sbjct: 170  EIDDWGAGKKPMMG----------NGFERRERGGGGGFFDSHSSKADESDSWVSSKSFTP 219

Query: 965  SPVEPXXXXXXXXGFESGYQRDIPIGGGADGDSWGK----------------------KR 852
            S  E             G+      GGGAD D+WG+                      K+
Sbjct: 220  S--EGRRSGGFDRERRGGFPTS---GGGADSDNWGRKSDGARAGMGENGGGADSDNWGKK 274

Query: 851  GEEVSESVG-RPRLVLQPRSVPISNGEQQQQRXXXXXXXXXXXXXXXXSNPFGAARPREE 675
             E V   +G RPRL LQPRS+P++NG Q+                   SNPFG ARPREE
Sbjct: 275  SEGVRSGIGERPRLNLQPRSIPLNNGNQEAS---------GVAVKPKGSNPFGNARPREE 325

Query: 674  VLGERGEDWKKIDEHL 627
            VL E+G+DWKKIDE L
Sbjct: 326  VLAEKGQDWKKIDEQL 341


>ref|XP_003540800.1| PREDICTED: uncharacterized protein LOC100820014 [Glycine max]
          Length = 380

 Score =  126 bits (317), Expect = 2e-26
 Identities = 123/397 (30%), Positives = 149/397 (37%), Gaps = 9/397 (2%)
 Frame = -2

Query: 1664 ATSVSAWKKPAVAAAGTWALDXXXXXXXXXXXXXXXXXXXXQPLSDFPXXXXXXXXXXXX 1485
            AT  SAW KP     G WALD                     PL+DFP            
Sbjct: 3    ATVSSAWSKP-----GAWALDSEEHEAELLQQNNNNPNDK--PLADFPSLAAAAATKPKK 55

Query: 1484 XXXXXXXLAEFNNGKSVTHGSSNKGVASVKGLTPDELSRLPTGPRERSAXXXXXXXXXXX 1305
                   LAEF           +  V             LPTGPR+R+A           
Sbjct: 56   KKAQTYSLAEFTAKPDSAFADQDPVV-------------LPTGPRQRTAEELDRTRLGGG 102

Query: 1304 GFKSYGS----DRVGGGSRYXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPLPPSKADEVD 1137
             F++YG     +   GG                                 LPPS+ADE D
Sbjct: 103  -FRNYGDRPNRNNSSGGDE---SSNSRWGSSRVSDEPRRNGFGARDSNRELPPSRADETD 158

Query: 1136 DWGAMKKSMGGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXRADEADNWLAKKSFTPSPV 957
            +W A KK  GG                              RADE+D+W++ KSF PS  
Sbjct: 159  NWAAAKKPSGG--------------FERRERDKGGFFDSQSRADESDSWVSNKSFVPS-- 202

Query: 956  EPXXXXXXXXGFESGYQRDIPIG--GGADGDSWGKKRGEEV--SESVG-RPRLVLQPRSV 792
            E         GFE   +R +  G  GGAD D+W  K+GE    SESVG RP+LVLQPR+V
Sbjct: 203  EGRRFGSNGGGFERE-RRVVGFGSSGGADSDNWNTKKGESNVGSESVGGRPKLVLQPRTV 261

Query: 791  PISNGEQQQQRXXXXXXXXXXXXXXXXSNPFGAARPREEVLGERGEDWKKIDEHLXXXXX 612
             +S+                        NPFG ARPRE+VL E+G+DWKKIDE L     
Sbjct: 262  SVSD----------EGVDGNNAGKPKGVNPFGEARPREQVLAEKGQDWKKIDEQLESVKI 311

Query: 611  XXXXXXXXEPXXXXXXXXXGNGRMSSPEDRTERSWRR 501
                               G GR + PE RTERSWR+
Sbjct: 312  KEASGGDGFGKRGFGSSNGGGGRATLPESRTERSWRK 348


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