BLASTX nr result

ID: Coptis24_contig00003693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003693
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324409.1| predicted protein [Populus trichocarpa] gi|2...   100   9e-24
ref|XP_004139340.1| PREDICTED: multiprotein-bridging factor 1c-l...   101   1e-21
gb|AAL32037.2|AF439278_1 ethylene-responsive transciptional coac...    97   3e-21
ref|NP_189093.1| multiprotein-bridging factor 1c [Arabidopsis th...    99   1e-20
ref|XP_002883523.1| ATMBF1C/MBF1C [Arabidopsis lyrata subsp. lyr...    99   1e-20

>ref|XP_002324409.1| predicted protein [Populus trichocarpa] gi|222865843|gb|EEF02974.1|
           predicted protein [Populus trichocarpa]
          Length = 145

 Score =  100 bits (250), Expect(2) = 9e-24
 Identities = 51/70 (72%), Positives = 57/70 (81%)
 Frame = +1

Query: 34  NTTSSEREAETVALDRVSTEVRQAIQKARLGKKMSQAELAKQINERPQVVQEYESGKAVP 213
           N    E E E  ALDR+STEVRQAIQKARL KKMSQ ELAK INE+P+VVQEYE+GKAVP
Sbjct: 64  NARKLEEETEPAALDRISTEVRQAIQKARLEKKMSQTELAKLINEQPKVVQEYENGKAVP 123

Query: 214 NQNVLGKMEK 243
           NQ +L KME+
Sbjct: 124 NQAILAKMER 133



 Score = 34.7 bits (78), Expect(2) = 9e-24
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = +2

Query: 2   KKADAGSNKKTTQPVVNAR 58
           KK DAGSNKK T PVVNAR
Sbjct: 48  KKFDAGSNKKATAPVVNAR 66


>ref|XP_004139340.1| PREDICTED: multiprotein-bridging factor 1c-like [Cucumis sativus]
           gi|449521076|ref|XP_004167557.1| PREDICTED:
           multiprotein-bridging factor 1c-like [Cucumis sativus]
          Length = 145

 Score =  101 bits (251), Expect(2) = 1e-21
 Identities = 54/70 (77%), Positives = 56/70 (80%)
 Frame = +1

Query: 34  NTTSSEREAETVALDRVSTEVRQAIQKARLGKKMSQAELAKQINERPQVVQEYESGKAVP 213
           N    E   E  ALDRV+ EVRQAIQKARL KKMSQAELAKQINER QVVQEYE+GKAVP
Sbjct: 64  NARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGKAVP 123

Query: 214 NQNVLGKMEK 243
           NQ VL KMEK
Sbjct: 124 NQAVLAKMEK 133



 Score = 26.9 bits (58), Expect(2) = 1e-21
 Identities = 13/19 (68%), Positives = 13/19 (68%)
 Frame = +2

Query: 2   KKADAGSNKKTTQPVVNAR 58
           KK DAG NKK T   VNAR
Sbjct: 48  KKFDAGLNKKVTAAPVNAR 66


>gb|AAL32037.2|AF439278_1 ethylene-responsive transciptional coactivator-like protein [Retama
           raetam]
          Length = 145

 Score = 97.4 bits (241), Expect(2) = 3e-21
 Identities = 50/65 (76%), Positives = 56/65 (86%)
 Frame = +1

Query: 49  EREAETVALDRVSTEVRQAIQKARLGKKMSQAELAKQINERPQVVQEYESGKAVPNQNVL 228
           +  AE  AL+RV+ EVR AIQKARL KKMSQAE+AKQINERPQVVQEYE+GKAVPNQ VL
Sbjct: 69  DEAAEPAALERVAGEVRHAIQKARLEKKMSQAEVAKQINERPQVVQEYENGKAVPNQAVL 128

Query: 229 GKMEK 243
            KME+
Sbjct: 129 AKMER 133



 Score = 29.6 bits (65), Expect(2) = 3e-21
 Identities = 14/19 (73%), Positives = 15/19 (78%)
 Frame = +2

Query: 2   KKADAGSNKKTTQPVVNAR 58
           KK DAGSN+KT  PVV AR
Sbjct: 48  KKFDAGSNEKTAGPVVYAR 66


>ref|NP_189093.1| multiprotein-bridging factor 1c [Arabidopsis thaliana]
           gi|75274343|sp|Q9LV58.1|MBF1C_ARATH RecName:
           Full=Multiprotein-bridging factor 1c
           gi|9294040|dbj|BAB01997.1| ethylene-responsive
           transcriptional coactivator-like protein [Arabidopsis
           thaliana] gi|28466837|gb|AAO44027.1| At3g24500
           [Arabidopsis thaliana] gi|110735899|dbj|BAE99925.1|
           putative ethylene-responsive transcriptional coactivator
           [Arabidopsis thaliana] gi|332643384|gb|AEE76905.1|
           multiprotein-bridging factor 1c [Arabidopsis thaliana]
          Length = 148

 Score = 99.0 bits (245), Expect(2) = 1e-20
 Identities = 52/70 (74%), Positives = 55/70 (78%)
 Frame = +1

Query: 34  NTTSSEREAETVALDRVSTEVRQAIQKARLGKKMSQAELAKQINERPQVVQEYESGKAVP 213
           NT   E E E  A+DRV  EVR  IQKARL KKMSQA+LAKQINER QVVQEYE+GKAVP
Sbjct: 67  NTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYENGKAVP 126

Query: 214 NQNVLGKMEK 243
           NQ VL KMEK
Sbjct: 127 NQAVLAKMEK 136



 Score = 25.8 bits (55), Expect(2) = 1e-20
 Identities = 13/22 (59%), Positives = 15/22 (68%), Gaps = 3/22 (13%)
 Frame = +2

Query: 2   KKADAGSNKK---TTQPVVNAR 58
           KK DAGSNKK   T  PV+N +
Sbjct: 48  KKFDAGSNKKGKSTAVPVINTK 69


>ref|XP_002883523.1| ATMBF1C/MBF1C [Arabidopsis lyrata subsp. lyrata]
           gi|297329363|gb|EFH59782.1| ATMBF1C/MBF1C [Arabidopsis
           lyrata subsp. lyrata]
          Length = 148

 Score = 99.0 bits (245), Expect(2) = 1e-20
 Identities = 52/70 (74%), Positives = 55/70 (78%)
 Frame = +1

Query: 34  NTTSSEREAETVALDRVSTEVRQAIQKARLGKKMSQAELAKQINERPQVVQEYESGKAVP 213
           NT   E E E  A+DRV  EVR  IQKARL KKMSQA+LAKQINER QVVQEYE+GKAVP
Sbjct: 67  NTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYENGKAVP 126

Query: 214 NQNVLGKMEK 243
           NQ VL KMEK
Sbjct: 127 NQAVLAKMEK 136



 Score = 25.8 bits (55), Expect(2) = 1e-20
 Identities = 13/22 (59%), Positives = 15/22 (68%), Gaps = 3/22 (13%)
 Frame = +2

Query: 2   KKADAGSNKK---TTQPVVNAR 58
           KK DAGSNKK   T  PV+N +
Sbjct: 48  KKFDAGSNKKGKSTAVPVINTK 69


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